RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 KRTAP21-3Q3LHN1 58 aa8.13□□□□□ -1.11
SMC6-201ENST00000351948 Q8N9P0 234 aaPredicted RBP8.13□□□□□ -1.11
SMC6-201ENST00000351948 LINC01554Q52M75 96 aa8.12□□□□□ -1.11
SMC6-201ENST00000351948 HRES1P13985 223 aa8.09□□□□□ -1.11
SMC6-201ENST00000351948 LINC00483Q53H64 154 aa8.07□□□□□ -1.12
SMC6-201ENST00000351948 ZCCHC13Q8WW36 166 aaKnown RBP8.07□□□□□ -1.12
SMC6-201ENST00000351948 A0A0D9SG42 100 aa8.05□□□□□ -1.12
SMC6-201ENST00000351948 TGP01266 2768 aa8.05□□□□□ -1.12
SMC6-201ENST00000351948 UQCR11O14957 56 aa8.04□□□□□ -1.12
SMC6-201ENST00000351948 M0R2T5 61 aa8.03□□□□□ -1.12
SMC6-201ENST00000351948 Q5W150 140 aa8.01□□□□□ -1.13
SMC6-201ENST00000351948 SPANXA2-OT1Q8N9U9 137 aa8.01□□□□□ -1.13
SMC6-201ENST00000351948 SPINK7P58062 85 aa8.01□□□□□ -1.13
SMC6-201ENST00000351948 CYSTM1Q9H1C7 97 aa8.01□□□□□ -1.13
SMC6-201ENST00000351948 PRO0628Q9UI54 55 aa8.01□□□□□ -1.13
SMC6-201ENST00000351948 CYP4F30PQ9H0H9 118 aa8□□□□□ -1.13
SMC6-201ENST00000351948 MIR22HGQ0VDD5 57 aa7.98□□□□□ -1.13
SMC6-201ENST00000351948 NOTCH2NLQ7Z3S9 236 aa7.97□□□□□ -1.13
SMC6-201ENST00000351948 SPINT4Q6UDR6 99 aa7.95□□□□□ -1.14
SMC6-201ENST00000351948 KRTAP13-2Q52LG2 175 aa7.93□□□□□ -1.14
SMC6-201ENST00000351948 BSNQ9UPA5 3926 aa7.93□□□□□ -1.14
SMC6-201ENST00000351948 SRRM2Q9UQ35 2752 aaKnown RBP7.9□□□□□ -1.15
SMC6-201ENST00000351948 KRTAP13-1Q8IUC0 172 aa7.89□□□□□ -1.15
SMC6-201ENST00000351948 SEC61BP60468 96 aaKnown RBP7.89□□□□□ -1.15
SMC6-201ENST00000351948 TRRAPQ9Y4A5 3859 aa7.84□□□□□ -1.15
SMC6-201ENST00000351948 S4R3F8 94 aa7.83□□□□□ -1.16
SMC6-201ENST00000351948 CSAG1Q6PB30 78 aa7.82□□□□□ -1.16
SMC6-201ENST00000351948 KRTAP29-1A8MX34 341 aaPredicted RBP7.82□□□□□ -1.16
SMC6-201ENST00000351948 FP248Q71RG6 208 aaPredicted RBP7.81□□□□□ -1.16
SMC6-201ENST00000351948 A0A1B0GU33 70 aa7.78□□□□□ -1.16
SMC6-201ENST00000351948 ANK3Q12955 4377 aaKnown RBP7.75□□□□□ -1.17
SMC6-201ENST00000351948 OXTP01178 125 aa7.73□□□□□ -1.17
SMC6-201ENST00000351948 CAMK2N1Q7Z7J9 78 aa7.72□□□□□ -1.17
SMC6-201ENST00000351948 CRIPTQ9P021 101 aa7.72□□□□□ -1.17
SMC6-201ENST00000351948 Q1T7F1 81 aa7.71□□□□□ -1.17
SMC6-201ENST00000351948 ASB16-AS1Q495Z4 193 aa7.68□□□□□ -1.18
SMC6-201ENST00000351948 CDC42SE1Q9NRR8 79 aa7.68□□□□□ -1.18
SMC6-201ENST00000351948 R4GN34 69 aa7.66□□□□□ -1.18
SMC6-201ENST00000351948 DMAC1Q96GE9 116 aa7.65□□□□□ -1.18
SMC6-201ENST00000351948 LINC01558Q9Y6Z2 57 aa7.65□□□□□ -1.18
SMC6-201ENST00000351948 RPS29P62273 56 aaKnown RBP7.65□□□□□ -1.19
SMC6-201ENST00000351948 KRTAP1-4P0C5Y4 121 aa7.64□□□□□ -1.19
SMC6-201ENST00000351948 Q75L30 129 aa7.6□□□□□ -1.19
SMC6-201ENST00000351948 Q5XG85 94 aa7.59□□□□□ -1.19
SMC6-201ENST00000351948 VPS13CQ709C8 3753 aa7.58□□□□□ -1.2
SMC6-201ENST00000351948 Q5VV11 94 aa7.57□□□□□ -1.2
SMC6-201ENST00000351948 FBN3Q75N90 2809 aa7.56□□□□□ -1.2
SMC6-201ENST00000351948 M0QZ58 72 aa7.56□□□□□ -1.2
SMC6-201ENST00000351948 ADM2Q7Z4H4 148 aa7.54□□□□□ -1.2
SMC6-201ENST00000351948 RPL37P61927 97 aaKnown RBP7.54□□□□□ -1.2
SMC6-201ENST00000351948 SPATA8Q6RVD6 105 aa7.52□□□□□ -1.21
SMC6-201ENST00000351948 COL7A1Q02388 2944 aa7.51□□□□□ -1.21
SMC6-201ENST00000351948 H1FX-AS1Q4G0G2 97 aa7.48□□□□□ -1.21
SMC6-201ENST00000351948 KTN1-AS1Q86SY8 53 aa7.48□□□□□ -1.21
SMC6-201ENST00000351948 ZNF469Q96JG9 3925 aaPredicted RBP7.46□□□□□ -1.21
SMC6-201ENST00000351948 LCA10Q71F78 164 aa7.46□□□□□ -1.22
SMC6-201ENST00000351948 A0A1B0GVY2 172 aa7.44□□□□□ -1.22
SMC6-201ENST00000351948 A8MUU9 505 aa7.42□□□□□ -1.22
SMC6-201ENST00000351948 MEGF8Q7Z7M0 2845 aa7.42□□□□□ -1.22
SMC6-201ENST00000351948 XP32Q5T750 250 aa7.41□□□□□ -1.22
SMC6-201ENST00000351948 PRAC1Q96KF2 57 aa7.41□□□□□ -1.22
SMC6-201ENST00000351948 C20orf166-AS1Q96NR2 134 aa7.41□□□□□ -1.22
SMC6-201ENST00000351948 A8MU10 97 aa7.33□□□□□ -1.24
SMC6-201ENST00000351948 PLAC4Q8WY50 150 aa7.29□□□□□ -1.24
SMC6-201ENST00000351948 KRTAP16-1A8MUX0 517 aa7.23□□□□□ -1.25
SMC6-201ENST00000351948 TPRXLQ17RH7 258 aa7.23□□□□□ -1.25
SMC6-201ENST00000351948 KRTAP10-8P60410 259 aa7.22□□□□□ -1.25
SMC6-201ENST00000351948 KRTAP13-3Q3SY46 172 aa7.22□□□□□ -1.25
SMC6-201ENST00000351948 AKAP9Q99996 3911 aa7.21□□□□□ -1.25
SMC6-201ENST00000351948 ROMO1P60602 79 aa7.2□□□□□ -1.26
SMC6-201ENST00000351948 CSMD3Q7Z407 3707 aa7.17□□□□□ -1.26
SMC6-201ENST00000351948 HUWE1Q7Z6Z7 4374 aaKnown RBP7.14□□□□□ -1.27
SMC6-201ENST00000351948 LUZP6Q538Z0 58 aa7.12□□□□□ -1.27
SMC6-201ENST00000351948 DNHD1Q96M86 4753 aa7.06□□□□□ -1.28
SMC6-201ENST00000351948 KRTAP10-10P60014 251 aa6.97□□□□□ -1.29
SMC6-201ENST00000351948 P0C880 135 aa6.94□□□□□ -1.3
SMC6-201ENST00000351948 KRTAP4-5Q9BYR2 181 aa6.93□□□□□ -1.3
SMC6-201ENST00000351948 DNAH9Q9NYC9 4486 aa6.91□□□□□ -1.3
SMC6-201ENST00000351948 A6NN06 94 aa6.91□□□□□ -1.3
SMC6-201ENST00000351948 H0YAA0 97 aa6.86□□□□□ -1.31
SMC6-201ENST00000351948 MT1HL1P0DM35 61 aa6.84□□□□□ -1.31
SMC6-201ENST00000351948 TNP1P09430 55 aa6.83□□□□□ -1.32
SMC6-201ENST00000351948 KRTAP25-1Q3LHN0 102 aa6.8□□□□□ -1.32
SMC6-201ENST00000351948 PLECQ15149 4684 aaKnown RBP6.78□□□□□ -1.32
SMC6-201ENST00000351948 C10orf95Q9H7T3 257 aa6.77□□□□□ -1.33
SMC6-201ENST00000351948 KRTAP10-4P60372 401 aaPredicted RBP6.76□□□□□ -1.33
SMC6-201ENST00000351948 DNAH5Q8TE73 4624 aa6.74□□□□□ -1.33
SMC6-201ENST00000351948 KRTAP3-1Q9BYR8 98 aa6.74□□□□□ -1.33
SMC6-201ENST00000351948 DNAH11Q96DT5 4516 aa6.66□□□□□ -1.34
SMC6-201ENST00000351948 DNAH1Q9P2D7 4330 aa6.64□□□□□ -1.35
SMC6-201ENST00000351948 PRKDCP78527 4128 aaKnown RBP6.63□□□□□ -1.35
SMC6-201ENST00000351948 STARD9Q9P2P6 4700 aa6.61□□□□□ -1.35
SMC6-201ENST00000351948 ALMS1Q8TCU4 4167 aa6.61□□□□□ -1.35
SMC6-201ENST00000351948 DNAH10Q8IVF4 4471 aa6.6□□□□□ -1.35
SMC6-201ENST00000351948 KRTAP12-2P59991 146 aa6.55□□□□□ -1.36
SMC6-201ENST00000351948 PRO2289Q9P1D8 64 aa6.53□□□□□ -1.36
SMC6-201ENST00000351948 FAT1Q14517 4588 aa6.52□□□□□ -1.37
SMC6-201ENST00000351948 A0A0A0MQY5 61 aa6.51□□□□□ -1.37
SMC6-201ENST00000351948 H3BS24 57 aa6.48□□□□□ -1.37
SMC6-201ENST00000351948 VPS13DQ5THJ4 4388 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms