RNA–Protein interactions for RNA: ENST00000351937.9

TRIM41-202, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best) BASIC

Gene TRIM41, Length 2,696 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-202ENST00000351937 APOBP04114 4563 aaKnown RBP10.85□□□□□ -0.67
TRIM41-202ENST00000351937 SMR3BP02814 79 aaPredicted RBP10.83□□□□□ -0.68
TRIM41-202ENST00000351937 PRR4Q16378 134 aa10.83□□□□□ -0.68
TRIM41-202ENST00000351937 WFDC13Q8IUB5 93 aa10.82□□□□□ -0.68
TRIM41-202ENST00000351937 NDUFB1O75438 58 aa10.81□□□□□ -0.68
TRIM41-202ENST00000351937 PLA2G1BP04054 148 aaKnown RBP10.81□□□□□ -0.68
TRIM41-202ENST00000351937 PSPHP1O15172 72 aa10.79□□□□□ -0.68
TRIM41-202ENST00000351937 RYR3Q15413 4870 aa10.76□□□□□ -0.69
TRIM41-202ENST00000351937 KRTAP29-1A8MX34 341 aaPredicted RBP10.76□□□□□ -0.69
TRIM41-202ENST00000351937 ASB16-AS1Q495Z4 193 aa10.76□□□□□ -0.69
TRIM41-202ENST00000351937 A8MU10 97 aa10.76□□□□□ -0.69
TRIM41-202ENST00000351937 C1orf64Q8NEQ6 169 aa10.75□□□□□ -0.69
TRIM41-202ENST00000351937 CDK2AP2O75956 126 aa10.74□□□□□ -0.69
TRIM41-202ENST00000351937 KRTAP10-4P60372 401 aaPredicted RBP10.74□□□□□ -0.69
TRIM41-202ENST00000351937 CASC2Q6XLA1 102 aa10.74□□□□□ -0.69
TRIM41-202ENST00000351937 ZCCHC13Q8WW36 166 aaKnown RBP10.74□□□□□ -0.69
TRIM41-202ENST00000351937 hDV103S1A0JD37 113 aa10.74□□□□□ -0.69
TRIM41-202ENST00000351937 TYMSOSQ8TAI1 123 aa10.72□□□□□ -0.69
TRIM41-202ENST00000351937 MMP24-AS1A0A0U1RRL7 71 aa10.71□□□□□ -0.69
TRIM41-202ENST00000351937 A0A1B0GVX0 72 aa10.71□□□□□ -0.69
TRIM41-202ENST00000351937 FAT1Q14517 4588 aa10.71□□□□□ -0.69
TRIM41-202ENST00000351937 IGHV6-1A0A0B4J1U7 121 aa10.68□□□□□ -0.7
TRIM41-202ENST00000351937 C4orf48Q5BLP8 95 aa10.68□□□□□ -0.7
TRIM41-202ENST00000351937 C8orf17Q9NRJ1 99 aa10.68□□□□□ -0.7
TRIM41-202ENST00000351937 LIMD2Q9BT23 127 aa10.67□□□□□ -0.7
TRIM41-202ENST00000351937 PRR26Q8N8Z3 221 aa10.65□□□□□ -0.7
TRIM41-202ENST00000351937 PMAIP1Q13794 54 aa10.65□□□□□ -0.7
TRIM41-202ENST00000351937 SPINK1P00995 79 aa10.64□□□□□ -0.71
TRIM41-202ENST00000351937 TRAV22A0A0B4J277 110 aa10.64□□□□□ -0.71
TRIM41-202ENST00000351937 MP68P56378 58 aa10.62□□□□□ -0.71
TRIM41-202ENST00000351937 A8MUN3 132 aa10.61□□□□□ -0.71
TRIM41-202ENST00000351937 FAM229AH3BQW9 127 aa10.61□□□□□ -0.71
TRIM41-202ENST00000351937 LINC00208Q96KT6 92 aa10.61□□□□□ -0.71
TRIM41-202ENST00000351937 Q1T7F1 81 aa10.6□□□□□ -0.71
TRIM41-202ENST00000351937 SPAG11AQ6PDA7 123 aa10.59□□□□□ -0.71
TRIM41-202ENST00000351937 LINC00304Q8N9R0 145 aa10.59□□□□□ -0.71
TRIM41-202ENST00000351937 H0Y9P7 68 aa10.59□□□□□ -0.71
TRIM41-202ENST00000351937 RPS29P62273 56 aaKnown RBP10.58□□□□□ -0.72
TRIM41-202ENST00000351937 NOTCH2NLQ7Z3S9 236 aa10.58□□□□□ -0.72
TRIM41-202ENST00000351937 C8orf87E5RJ46 101 aa10.56□□□□□ -0.72
TRIM41-202ENST00000351937 MRPL34Q9BQ48 92 aaKnown RBP10.55□□□□□ -0.72
TRIM41-202ENST00000351937 TP53AIP1Q9HCN2 124 aa10.54□□□□□ -0.72
TRIM41-202ENST00000351937 HSPG2P98160 4391 aa10.53□□□□□ -0.72
TRIM41-202ENST00000351937 PKHD1L1Q86WI1 4243 aa10.52□□□□□ -0.73
TRIM41-202ENST00000351937 RYR1P21817 5038 aa10.51□□□□□ -0.73
TRIM41-202ENST00000351937 H3BPC8 53 aa10.51□□□□□ -0.73
TRIM41-202ENST00000351937 Q5VSD8 79 aa10.51□□□□□ -0.73
TRIM41-202ENST00000351937 CYP4F30PQ9H0H9 118 aa10.5□□□□□ -0.73
TRIM41-202ENST00000351937 LINC00313P59037 77 aa10.49□□□□□ -0.73
TRIM41-202ENST00000351937 NDUFS5O43920 106 aa10.48□□□□□ -0.73
TRIM41-202ENST00000351937 Q5VV11 94 aa10.47□□□□□ -0.73
TRIM41-202ENST00000351937 SPTSSBQ8NFR3 76 aa10.42□□□□□ -0.74
TRIM41-202ENST00000351937 CHKB-CPT1BH3BT56 60 aa10.42□□□□□ -0.74
TRIM41-202ENST00000351937 SPANXA2-OT1Q8N9U9 137 aa10.41□□□□□ -0.74
TRIM41-202ENST00000351937 Q8N9P0 234 aaPredicted RBP10.39□□□□□ -0.75
TRIM41-202ENST00000351937 PRR15LQ9BU68 103 aa10.39□□□□□ -0.75
TRIM41-202ENST00000351937 KRTAP16-1A8MUX0 517 aa10.37□□□□□ -0.75
TRIM41-202ENST00000351937 KIAA1109Q2LD37 5005 aa10.36□□□□□ -0.75
TRIM41-202ENST00000351937 EPPK1P58107 5090 aaKnown RBP10.36□□□□□ -0.75
TRIM41-202ENST00000351937 KRTAP10-8P60410 259 aa10.34□□□□□ -0.75
TRIM41-202ENST00000351937 PCOTHQ58A44 107 aa10.34□□□□□ -0.75
TRIM41-202ENST00000351937 KRTAP17-1Q9BYP8 105 aa10.34□□□□□ -0.75
TRIM41-202ENST00000351937 Q8N1X5 172 aa10.33□□□□□ -0.76
TRIM41-202ENST00000351937 LCA10Q71F78 164 aa10.32□□□□□ -0.76
TRIM41-202ENST00000351937 KRTAP13-3Q3SY46 172 aa10.3□□□□□ -0.76
TRIM41-202ENST00000351937 Q5W150 140 aa10.3□□□□□ -0.76
TRIM41-202ENST00000351937 IGLV7-46A0A075B6I9 117 aa10.3□□□□□ -0.76
TRIM41-202ENST00000351937 LRP1Q07954 4544 aaKnown RBP10.29□□□□□ -0.76
TRIM41-202ENST00000351937 TNXBP22105 4242 aa10.29□□□□□ -0.76
TRIM41-202ENST00000351937 RBM12B-AS1Q9P1G2 102 aa10.28□□□□□ -0.76
TRIM41-202ENST00000351937 A6NED7 52 aa10.26□□□□□ -0.77
TRIM41-202ENST00000351937 LOC101927531A0A1B0GV80 90 aa10.25□□□□□ -0.77
TRIM41-202ENST00000351937 KTN1-AS1Q86SY8 53 aa10.24□□□□□ -0.77
TRIM41-202ENST00000351937 FAT3Q8TDW7 4589 aa10.23□□□□□ -0.77
TRIM41-202ENST00000351937 RETNLBQ9BQ08 111 aa10.22□□□□□ -0.77
TRIM41-202ENST00000351937 FLG2Q5D862 2391 aaPredicted RBP10.22□□□□□ -0.77
TRIM41-202ENST00000351937 COA5Q86WW8 74 aa10.21□□□□□ -0.78
TRIM41-202ENST00000351937 C9orf92A6NGG3 77 aa10.16□□□□□ -0.78
TRIM41-202ENST00000351937 A6NN06 94 aa10.15□□□□□ -0.78
TRIM41-202ENST00000351937 Q75L30 129 aa10.14□□□□□ -0.79
TRIM41-202ENST00000351937 MT1HL1P0DM35 61 aa10.13□□□□□ -0.79
TRIM41-202ENST00000351937 ATP11AUNQ6ZP68 121 aa10.13□□□□□ -0.79
TRIM41-202ENST00000351937 C20orf166-AS1Q96NR2 134 aa10.12□□□□□ -0.79
TRIM41-202ENST00000351937 IGKV2-30P06310 120 aa10.11□□□□□ -0.79
TRIM41-202ENST00000351937 MYCBP2O75592 4640 aa10.11□□□□□ -0.79
TRIM41-202ENST00000351937 A8MUU9 505 aa10.1□□□□□ -0.79
TRIM41-202ENST00000351937 SPINK7P58062 85 aa10.1□□□□□ -0.79
TRIM41-202ENST00000351937 HRES1P13985 223 aa10.09□□□□□ -0.79
TRIM41-202ENST00000351937 CDC42SE1Q9NRR8 79 aa10.06□□□□□ -0.8
TRIM41-202ENST00000351937 DMBT1Q9UGM3 2413 aaPredicted RBP10.04□□□□□ -0.8
TRIM41-202ENST00000351937 IGKV2D-30A0A075B6S6 120 aa10.02□□□□□ -0.81
TRIM41-202ENST00000351937 KRTAP4-5Q9BYR2 181 aa10.01□□□□□ -0.81
TRIM41-202ENST00000351937 C7orf65Q6ZTY9 151 aa9.98□□□□□ -0.81
TRIM41-202ENST00000351937 PRAC1Q96KF2 57 aa9.98□□□□□ -0.81
TRIM41-202ENST00000351937 LINC01558Q9Y6Z2 57 aa9.97□□□□□ -0.81
TRIM41-202ENST00000351937 ADM2Q7Z4H4 148 aa9.94□□□□□ -0.82
TRIM41-202ENST00000351937 ACYP2P14621 99 aa9.93□□□□□ -0.82
TRIM41-202ENST00000351937 DMAC1Q96GE9 116 aa9.91□□□□□ -0.82
TRIM41-202ENST00000351937 BIRC6Q9NR09 4857 aa9.9□□□□□ -0.83
TRIM41-202ENST00000351937 XP32Q5T750 250 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms