RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 SPANXA2-OT1Q8N9U9 137 aa9.86□□□□□ -0.83
PDAP1-201ENST00000350498 PKD1P98161 4303 aa9.85□□□□□ -0.83
PDAP1-201ENST00000350498 CD164Q04900 197 aa9.85□□□□□ -0.83
PDAP1-201ENST00000350498 Q5VV11 94 aa9.85□□□□□ -0.83
PDAP1-201ENST00000350498 Q8N9P0 234 aaPredicted RBP9.84□□□□□ -0.83
PDAP1-201ENST00000350498 C8orf17Q9NRJ1 99 aa9.84□□□□□ -0.83
PDAP1-201ENST00000350498 H3BPC8 53 aa9.83□□□□□ -0.84
PDAP1-201ENST00000350498 FAT2Q9NYQ8 4349 aa9.82□□□□□ -0.84
PDAP1-201ENST00000350498 COA5Q86WW8 74 aa9.82□□□□□ -0.84
PDAP1-201ENST00000350498 CIRBP-AS1Q8TBR5 109 aa9.82□□□□□ -0.84
PDAP1-201ENST00000350498 ASB16-AS1Q495Z4 193 aa9.81□□□□□ -0.84
PDAP1-201ENST00000350498 IGLV7-43P04211 117 aa9.8□□□□□ -0.84
PDAP1-201ENST00000350498 SPINK6Q6UWN8 80 aa9.8□□□□□ -0.84
PDAP1-201ENST00000350498 PRR15LQ9BU68 103 aa9.79□□□□□ -0.84
PDAP1-201ENST00000350498 A0A1B0GVX0 72 aa9.78□□□□□ -0.84
PDAP1-201ENST00000350498 ZNF706Q9Y5V0 76 aaPredicted RBP9.78□□□□□ -0.84
PDAP1-201ENST00000350498 IGLV7-46A0A075B6I9 117 aa9.78□□□□□ -0.84
PDAP1-201ENST00000350498 CHKB-CPT1BH3BT56 60 aa9.77□□□□□ -0.85
PDAP1-201ENST00000350498 KRTAP10-1P60331 282 aa9.74□□□□□ -0.85
PDAP1-201ENST00000350498 VPS13BQ7Z7G8 4022 aa9.73□□□□□ -0.85
PDAP1-201ENST00000350498 V9GYY9 64 aa9.73□□□□□ -0.85
PDAP1-201ENST00000350498 CDK2AP2O75956 126 aa9.72□□□□□ -0.85
PDAP1-201ENST00000350498 MRPL34Q9BQ48 92 aaKnown RBP9.72□□□□□ -0.85
PDAP1-201ENST00000350498 SPAG11AQ6PDA7 123 aa9.72□□□□□ -0.85
PDAP1-201ENST00000350498 TP53AIP1Q9HCN2 124 aa9.71□□□□□ -0.85
PDAP1-201ENST00000350498 PKHD1P08F94 4074 aa9.71□□□□□ -0.86
PDAP1-201ENST00000350498 Q5W150 140 aa9.71□□□□□ -0.86
PDAP1-201ENST00000350498 LIMD2Q9BT23 127 aa9.69□□□□□ -0.86
PDAP1-201ENST00000350498 HRES1P13985 223 aa9.66□□□□□ -0.86
PDAP1-201ENST00000350498 LCA10Q71F78 164 aa9.65□□□□□ -0.86
PDAP1-201ENST00000350498 KRTAP13-2Q52LG2 175 aa9.64□□□□□ -0.87
PDAP1-201ENST00000350498 SPTSSBQ8NFR3 76 aa9.62□□□□□ -0.87
PDAP1-201ENST00000350498 RETNLBQ9BQ08 111 aa9.62□□□□□ -0.87
PDAP1-201ENST00000350498 A6NED7 52 aa9.62□□□□□ -0.87
PDAP1-201ENST00000350498 PMAIP1Q13794 54 aa9.61□□□□□ -0.87
PDAP1-201ENST00000350498 PRR26Q8N8Z3 221 aa9.59□□□□□ -0.87
PDAP1-201ENST00000350498 SACSQ9NZJ4 4579 aa9.59□□□□□ -0.87
PDAP1-201ENST00000350498 LOC101927531A0A1B0GV80 90 aa9.58□□□□□ -0.88
PDAP1-201ENST00000350498 Q6ZSA8 131 aa9.58□□□□□ -0.88
PDAP1-201ENST00000350498 Q75L30 129 aa9.58□□□□□ -0.88
PDAP1-201ENST00000350498 KRTAP13-3Q3SY46 172 aa9.57□□□□□ -0.88
PDAP1-201ENST00000350498 SPINK7P58062 85 aa9.54□□□□□ -0.88
PDAP1-201ENST00000350498 SSBP3-AS1Q7Z2R9 100 aa9.53□□□□□ -0.88
PDAP1-201ENST00000350498 LINC01558Q9Y6Z2 57 aa9.53□□□□□ -0.88
PDAP1-201ENST00000350498 KRTAP1-4P0C5Y4 121 aa9.52□□□□□ -0.88
PDAP1-201ENST00000350498 FAT1Q14517 4588 aa9.48□□□□□ -0.89
PDAP1-201ENST00000350498 DYNC1H1Q14204 4646 aaKnown RBP9.47□□□□□ -0.89
PDAP1-201ENST00000350498 SEC61GP60059 68 aa9.46□□□□□ -0.89
PDAP1-201ENST00000350498 SMR3BP02814 79 aaPredicted RBP9.44□□□□□ -0.9
PDAP1-201ENST00000350498 LINC00313P59037 77 aa9.44□□□□□ -0.9
PDAP1-201ENST00000350498 CDC42SE1Q9NRR8 79 aa9.44□□□□□ -0.9
PDAP1-201ENST00000350498 PLA2G1BP04054 148 aaKnown RBP9.43□□□□□ -0.9
PDAP1-201ENST00000350498 ATP11AUNQ6ZP68 121 aa9.42□□□□□ -0.9
PDAP1-201ENST00000350498 A6NN06 94 aa9.38□□□□□ -0.91
PDAP1-201ENST00000350498 C8orf87E5RJ46 101 aa9.37□□□□□ -0.91
PDAP1-201ENST00000350498 ACYP2P14621 99 aa9.37□□□□□ -0.91
PDAP1-201ENST00000350498 KRTAP16-1A8MUX0 517 aa9.36□□□□□ -0.91
PDAP1-201ENST00000350498 TYMSOSQ8TAI1 123 aa9.36□□□□□ -0.91
PDAP1-201ENST00000350498 KMT2CQ8NEZ4 4911 aaKnown RBP9.35□□□□□ -0.91
PDAP1-201ENST00000350498 KTN1-AS1Q86SY8 53 aa9.34□□□□□ -0.91
PDAP1-201ENST00000350498 DMAC1Q96GE9 116 aa9.34□□□□□ -0.91
PDAP1-201ENST00000350498 APOBP04114 4563 aaKnown RBP9.32□□□□□ -0.92
PDAP1-201ENST00000350498 IGKV2D-30A0A075B6S6 120 aa9.32□□□□□ -0.92
PDAP1-201ENST00000350498 FAM229AH3BQW9 127 aa9.32□□□□□ -0.92
PDAP1-201ENST00000350498 IGKV2-30P06310 120 aa9.32□□□□□ -0.92
PDAP1-201ENST00000350498 C4orf48Q5BLP8 95 aa9.28□□□□□ -0.92
PDAP1-201ENST00000350498 RYR2Q92736 4967 aa9.26□□□□□ -0.93
PDAP1-201ENST00000350498 A0A1B0GU69 56 aa9.22□□□□□ -0.93
PDAP1-201ENST00000350498 RBM12B-AS1Q9P1G2 102 aa9.22□□□□□ -0.93
PDAP1-201ENST00000350498 SPINK1P00995 79 aa9.21□□□□□ -0.94
PDAP1-201ENST00000350498 KRTAP21-3Q3LHN1 58 aa9.21□□□□□ -0.94
PDAP1-201ENST00000350498 LINC00304Q8N9R0 145 aa9.2□□□□□ -0.94
PDAP1-201ENST00000350498 A0A1B0GVY2 172 aa9.19□□□□□ -0.94
PDAP1-201ENST00000350498 C7orf65Q6ZTY9 151 aa9.18□□□□□ -0.94
PDAP1-201ENST00000350498 C9orf92A6NGG3 77 aa9.16□□□□□ -0.94
PDAP1-201ENST00000350498 KRTAP10-4P60372 401 aaPredicted RBP9.16□□□□□ -0.94
PDAP1-201ENST00000350498 LRP1Q07954 4544 aaKnown RBP9.16□□□□□ -0.94
PDAP1-201ENST00000350498 Q8N1X5 172 aa9.15□□□□□ -0.94
PDAP1-201ENST00000350498 PKHD1L1Q86WI1 4243 aa9.15□□□□□ -0.94
PDAP1-201ENST00000350498 ADM2Q7Z4H4 148 aa9.14□□□□□ -0.95
PDAP1-201ENST00000350498 PRAC1Q96KF2 57 aa9.13□□□□□ -0.95
PDAP1-201ENST00000350498 MIR22HGQ0VDD5 57 aa9.05□□□□□ -0.96
PDAP1-201ENST00000350498 SPATA8Q6RVD6 105 aa9.05□□□□□ -0.96
PDAP1-201ENST00000350498 RYR3Q15413 4870 aa9.05□□□□□ -0.96
PDAP1-201ENST00000350498 UQCR11O14957 56 aa9.02□□□□□ -0.97
PDAP1-201ENST00000350498 FLG2Q5D862 2391 aaPredicted RBP9.01□□□□□ -0.97
PDAP1-201ENST00000350498 HSPG2P98160 4391 aa8.97□□□□□ -0.97
PDAP1-201ENST00000350498 RPS29P62273 56 aaKnown RBP8.97□□□□□ -0.97
PDAP1-201ENST00000350498 MYCBP2O75592 4640 aa8.96□□□□□ -0.98
PDAP1-201ENST00000350498 TNXBP22105 4242 aa8.96□□□□□ -0.98
PDAP1-201ENST00000350498 FAT3Q8TDW7 4589 aa8.95□□□□□ -0.98
PDAP1-201ENST00000350498 KRTAP17-1Q9BYP8 105 aa8.94□□□□□ -0.98
PDAP1-201ENST00000350498 DMBT1Q9UGM3 2413 aaPredicted RBP8.92□□□□□ -0.98
PDAP1-201ENST00000350498 A8MUU9 505 aa8.9□□□□□ -0.98
PDAP1-201ENST00000350498 KRTAP3-1Q9BYR8 98 aa8.9□□□□□ -0.98
PDAP1-201ENST00000350498 C20orf166-AS1Q96NR2 134 aa8.89□□□□□ -0.99
PDAP1-201ENST00000350498 KIAA1109Q2LD37 5005 aa8.86□□□□□ -0.99
PDAP1-201ENST00000350498 RYR1P21817 5038 aa8.83□□□□□ -1
PDAP1-201ENST00000350498 H0YAA0 97 aa8.82□□□□□ -1
PDAP1-201ENST00000350498 Q5VSD8 79 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms