RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 C14orf177Q52M58 125 aa11.2□□□□□ -0.62
SCARF1-202ENST00000348987 KMT2AQ03164 3969 aa11.19□□□□□ -0.62
SCARF1-202ENST00000348987 NBDYA0A0U1RRE5 68 aa11.18□□□□□ -0.62
SCARF1-202ENST00000348987 FRAS1Q86XX4 4008 aa11.18□□□□□ -0.62
SCARF1-202ENST00000348987 A0A1B0GVX0 72 aa11.18□□□□□ -0.62
SCARF1-202ENST00000348987 A0A087X002 238 aa11.17□□□□□ -0.62
SCARF1-202ENST00000348987 C8orf87E5RJ46 101 aa11.17□□□□□ -0.62
SCARF1-202ENST00000348987 Q6ZRN7 208 aaPredicted RBP11.17□□□□□ -0.62
SCARF1-202ENST00000348987 NOTCH2NLQ7Z3S9 236 aa11.17□□□□□ -0.62
SCARF1-202ENST00000348987 MRPL34Q9BQ48 92 aaKnown RBP11.17□□□□□ -0.62
SCARF1-202ENST00000348987 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.15□□□□□ -0.62
SCARF1-202ENST00000348987 ADM2Q7Z4H4 148 aa11.15□□□□□ -0.62
SCARF1-202ENST00000348987 HECTD4Q9Y4D8 3996 aa11.14□□□□□ -0.63
SCARF1-202ENST00000348987 VPS13DQ5THJ4 4388 aa11.13□□□□□ -0.63
SCARF1-202ENST00000348987 KRTAP13-1Q8IUC0 172 aa11.12□□□□□ -0.63
SCARF1-202ENST00000348987 CDK2AP2O75956 126 aa11.12□□□□□ -0.63
SCARF1-202ENST00000348987 DNAH2Q9P225 4427 aa11.11□□□□□ -0.63
SCARF1-202ENST00000348987 Q5W150 140 aa11.09□□□□□ -0.63
SCARF1-202ENST00000348987 NUPR2A6NF83 97 aa11.08□□□□□ -0.64
SCARF1-202ENST00000348987 DNAH8Q96JB1 4490 aa11.07□□□□□ -0.64
SCARF1-202ENST00000348987 SPACA4Q8TDM5 124 aa11.05□□□□□ -0.64
SCARF1-202ENST00000348987 FBN3Q75N90 2809 aa11.04□□□□□ -0.64
SCARF1-202ENST00000348987 ACYP2P14621 99 aa11.04□□□□□ -0.64
SCARF1-202ENST00000348987 ALMS1Q8TCU4 4167 aa11.04□□□□□ -0.64
SCARF1-202ENST00000348987 PLA2G1BP04054 148 aaKnown RBP11.02□□□□□ -0.65
SCARF1-202ENST00000348987 C4orf48Q5BLP8 95 aa11.02□□□□□ -0.65
SCARF1-202ENST00000348987 ANAPC11Q9NYG5 84 aa11.02□□□□□ -0.65
SCARF1-202ENST00000348987 DNAH17Q9UFH2 4485 aa11□□□□□ -0.65
SCARF1-202ENST00000348987 A0A087WTM6 91 aa11□□□□□ -0.65
SCARF1-202ENST00000348987 KRTAP13-3Q3SY46 172 aa10.99□□□□□ -0.65
SCARF1-202ENST00000348987 SPINK6Q6UWN8 80 aa10.98□□□□□ -0.65
SCARF1-202ENST00000348987 A0A1B0GU69 56 aa10.97□□□□□ -0.65
SCARF1-202ENST00000348987 LINC01554Q52M75 96 aa10.97□□□□□ -0.65
SCARF1-202ENST00000348987 LINC00483Q53H64 154 aa10.97□□□□□ -0.65
SCARF1-202ENST00000348987 WWC2-AS2Q96NR7 200 aa10.97□□□□□ -0.65
SCARF1-202ENST00000348987 PSORS1C2Q9UIG4 136 aa10.96□□□□□ -0.66
SCARF1-202ENST00000348987 RTL8CO15255 209 aa10.93□□□□□ -0.66
SCARF1-202ENST00000348987 SPATA8Q6RVD6 105 aa10.92□□□□□ -0.66
SCARF1-202ENST00000348987 DNAH6Q9C0G6 4158 aa10.92□□□□□ -0.66
SCARF1-202ENST00000348987 DMAC1Q96GE9 116 aa10.91□□□□□ -0.66
SCARF1-202ENST00000348987 IGLV5-52A0A0A0MRZ9 124 aa10.89□□□□□ -0.67
SCARF1-202ENST00000348987 MIR22HGQ0VDD5 57 aa10.87□□□□□ -0.67
SCARF1-202ENST00000348987 ZNF706Q9Y5V0 76 aaPredicted RBP10.86□□□□□ -0.67
SCARF1-202ENST00000348987 RETNLBQ9BQ08 111 aa10.86□□□□□ -0.67
SCARF1-202ENST00000348987 LY6G6CO95867 125 aa10.85□□□□□ -0.67
SCARF1-202ENST00000348987 ZNF861PO60384 105 aa10.83□□□□□ -0.68
SCARF1-202ENST00000348987 UQCR11O14957 56 aa10.83□□□□□ -0.68
SCARF1-202ENST00000348987 DNAH11Q96DT5 4516 aa10.81□□□□□ -0.68
SCARF1-202ENST00000348987 HYDINQ4G0P3 5121 aa10.81□□□□□ -0.68
SCARF1-202ENST00000348987 CSAG1Q6PB30 78 aa10.78□□□□□ -0.68
SCARF1-202ENST00000348987 H3BS24 57 aa10.77□□□□□ -0.68
SCARF1-202ENST00000348987 CIRBP-AS1Q8TBR5 109 aa10.77□□□□□ -0.69
SCARF1-202ENST00000348987 DNAH5Q8TE73 4624 aa10.77□□□□□ -0.69
SCARF1-202ENST00000348987 C1orf134Q5TEV5 83 aa10.76□□□□□ -0.69
SCARF1-202ENST00000348987 FAM229AH3BQW9 127 aa10.71□□□□□ -0.69
SCARF1-202ENST00000348987 IGKV2-30P06310 120 aa10.71□□□□□ -0.69
SCARF1-202ENST00000348987 LRP1BQ9NZR2 4599 aa10.71□□□□□ -0.7
SCARF1-202ENST00000348987 IGLV7-43P04211 117 aa10.71□□□□□ -0.7
SCARF1-202ENST00000348987 KRTAP10-2P60368 255 aa10.71□□□□□ -0.7
SCARF1-202ENST00000348987 IGKV2D-30A0A075B6S6 120 aa10.61□□□□□ -0.71
SCARF1-202ENST00000348987 FAT2Q9NYQ8 4349 aa10.59□□□□□ -0.71
SCARF1-202ENST00000348987 PKD1P98161 4303 aa10.58□□□□□ -0.72
SCARF1-202ENST00000348987 VPS13BQ7Z7G8 4022 aa10.54□□□□□ -0.72
SCARF1-202ENST00000348987 SPINK1P00995 79 aa10.54□□□□□ -0.72
SCARF1-202ENST00000348987 KRTAP10-1P60331 282 aa10.52□□□□□ -0.73
SCARF1-202ENST00000348987 KRTAP13-2Q52LG2 175 aa10.52□□□□□ -0.73
SCARF1-202ENST00000348987 SSBP3-AS1Q7Z2R9 100 aa10.52□□□□□ -0.73
SCARF1-202ENST00000348987 KRTAP16-1A8MUX0 517 aa10.51□□□□□ -0.73
SCARF1-202ENST00000348987 PKHD1P08F94 4074 aa10.49□□□□□ -0.73
SCARF1-202ENST00000348987 Q6ZSA8 131 aa10.42□□□□□ -0.74
SCARF1-202ENST00000348987 Q8N1X5 172 aa10.42□□□□□ -0.74
SCARF1-202ENST00000348987 SACSQ9NZJ4 4579 aa10.4□□□□□ -0.74
SCARF1-202ENST00000348987 A8MUU9 505 aa10.38□□□□□ -0.75
SCARF1-202ENST00000348987 H0YAA0 97 aa10.38□□□□□ -0.75
SCARF1-202ENST00000348987 KRTAP1-4P0C5Y4 121 aa10.38□□□□□ -0.75
SCARF1-202ENST00000348987 KRTAP25-1Q3LHN0 102 aa10.36□□□□□ -0.75
SCARF1-202ENST00000348987 LINC00304Q8N9R0 145 aa10.35□□□□□ -0.75
SCARF1-202ENST00000348987 ROMO1P60602 79 aa10.29□□□□□ -0.76
SCARF1-202ENST00000348987 TYMSOSQ8TAI1 123 aa10.29□□□□□ -0.76
SCARF1-202ENST00000348987 KRTAP21-3Q3LHN1 58 aa10.28□□□□□ -0.76
SCARF1-202ENST00000348987 FAT1Q14517 4588 aa10.26□□□□□ -0.77
SCARF1-202ENST00000348987 DYNC1H1Q14204 4646 aaKnown RBP10.24□□□□□ -0.77
SCARF1-202ENST00000348987 FLG2Q5D862 2391 aaPredicted RBP10.24□□□□□ -0.77
SCARF1-202ENST00000348987 SMR3BP02814 79 aaPredicted RBP10.23□□□□□ -0.77
SCARF1-202ENST00000348987 A0A1B0GU33 70 aa10.21□□□□□ -0.77
SCARF1-202ENST00000348987 CRIPTQ9P021 101 aa10.21□□□□□ -0.78
SCARF1-202ENST00000348987 KMT2CQ8NEZ4 4911 aaKnown RBP10.18□□□□□ -0.78
SCARF1-202ENST00000348987 H1FX-AS1Q4G0G2 97 aa10.14□□□□□ -0.79
SCARF1-202ENST00000348987 RYR2Q92736 4967 aa10.07□□□□□ -0.8
SCARF1-202ENST00000348987 APOBP04114 4563 aaKnown RBP10.07□□□□□ -0.8
SCARF1-202ENST00000348987 KRTAP3-1Q9BYR8 98 aa10.07□□□□□ -0.8
SCARF1-202ENST00000348987 P0C880 135 aa10.04□□□□□ -0.8
SCARF1-202ENST00000348987 K7ERS5 55 aa10□□□□□ -0.81
SCARF1-202ENST00000348987 A0A1B0GVY2 172 aa9.98□□□□□ -0.81
SCARF1-202ENST00000348987 C9orf92A6NGG3 77 aa9.97□□□□□ -0.81
SCARF1-202ENST00000348987 COX6B2Q6YFQ2 88 aa9.96□□□□□ -0.82
SCARF1-202ENST00000348987 PKHD1L1Q86WI1 4243 aa9.94□□□□□ -0.82
SCARF1-202ENST00000348987 RPS29P62273 56 aaKnown RBP9.89□□□□□ -0.83
SCARF1-202ENST00000348987 KRTAP10-4P60372 401 aaPredicted RBP9.88□□□□□ -0.83
SCARF1-202ENST00000348987 LRP1Q07954 4544 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms