RNA–Protein interactions for RNA: ENST00000347048.8

PTPA-202, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-202ENST00000347048 CD164Q04900 197 aa14.34□□□□□ -0.11
PTPA-202ENST00000347048 PCOTHQ58A44 107 aa14.34□□□□□ -0.11
PTPA-202ENST00000347048 HECTD4Q9Y4D8 3996 aa14.32□□□□□ -0.12
PTPA-202ENST00000347048 Q5VV11 94 aa14.3□□□□□ -0.12
PTPA-202ENST00000347048 A0A087X002 238 aa14.27□□□□□ -0.13
PTPA-202ENST00000347048 NOTCH2NLQ7Z3S9 236 aa14.27□□□□□ -0.13
PTPA-202ENST00000347048 SSBP3-AS1Q7Z2R9 100 aa14.26□□□□□ -0.13
PTPA-202ENST00000347048 DNAH2Q9P225 4427 aa14.26□□□□□ -0.13
PTPA-202ENST00000347048 LOC101927531A0A1B0GV80 90 aa14.23□□□□□ -0.13
PTPA-202ENST00000347048 CIRBP-AS1Q8TBR5 109 aa14.22□□□□□ -0.13
PTPA-202ENST00000347048 PRR15LQ9BU68 103 aa14.21□□□□□ -0.13
PTPA-202ENST00000347048 C8orf87E5RJ46 101 aa14.2□□□□□ -0.14
PTPA-202ENST00000347048 SPINK6Q6UWN8 80 aa14.2□□□□□ -0.14
PTPA-202ENST00000347048 CHKB-CPT1BH3BT56 60 aa14.16□□□□□ -0.14
PTPA-202ENST00000347048 Q75L30 129 aa14.16□□□□□ -0.14
PTPA-202ENST00000347048 KRTAP13-3Q3SY46 172 aa14.15□□□□□ -0.14
PTPA-202ENST00000347048 FRAS1Q86XX4 4008 aa14.14□□□□□ -0.15
PTPA-202ENST00000347048 KMT2AQ03164 3969 aa14.12□□□□□ -0.15
PTPA-202ENST00000347048 LY6G6CO95867 125 aa14.12□□□□□ -0.15
PTPA-202ENST00000347048 HRES1P13985 223 aa14.11□□□□□ -0.15
PTPA-202ENST00000347048 LINC01558Q9Y6Z2 57 aa14.11□□□□□ -0.15
PTPA-202ENST00000347048 Q5W150 140 aa14.09□□□□□ -0.15
PTPA-202ENST00000347048 DNAH6Q9C0G6 4158 aa14.07□□□□□ -0.16
PTPA-202ENST00000347048 KRTAP10-2P60368 255 aa14.03□□□□□ -0.16
PTPA-202ENST00000347048 LINC00313P59037 77 aa14.02□□□□□ -0.17
PTPA-202ENST00000347048 SPAG11AQ6PDA7 123 aa14.01□□□□□ -0.17
PTPA-202ENST00000347048 ALMS1Q8TCU4 4167 aa14□□□□□ -0.17
PTPA-202ENST00000347048 Q6ZSA8 131 aa13.99□□□□□ -0.17
PTPA-202ENST00000347048 FAM229AH3BQW9 127 aa13.98□□□□□ -0.17
PTPA-202ENST00000347048 DNAH11Q96DT5 4516 aa13.98□□□□□ -0.17
PTPA-202ENST00000347048 A6NED7 52 aa13.98□□□□□ -0.17
PTPA-202ENST00000347048 KRTAP13-2Q52LG2 175 aa13.96□□□□□ -0.17
PTPA-202ENST00000347048 DNAH5Q8TE73 4624 aa13.95□□□□□ -0.18
PTPA-202ENST00000347048 ACYP2P14621 99 aa13.94□□□□□ -0.18
PTPA-202ENST00000347048 PMAIP1Q13794 54 aa13.94□□□□□ -0.18
PTPA-202ENST00000347048 A8MU10 97 aa13.93□□□□□ -0.18
PTPA-202ENST00000347048 LCA10Q71F78 164 aa13.91□□□□□ -0.18
PTPA-202ENST00000347048 ATP11AUNQ6ZP68 121 aa13.89□□□□□ -0.19
PTPA-202ENST00000347048 CDC42SE1Q9NRR8 79 aa13.89□□□□□ -0.19
PTPA-202ENST00000347048 HYDINQ4G0P3 5121 aa13.89□□□□□ -0.19
PTPA-202ENST00000347048 KRTAP10-1P60331 282 aa13.88□□□□□ -0.19
PTPA-202ENST00000347048 DMAC1Q96GE9 116 aa13.87□□□□□ -0.19
PTPA-202ENST00000347048 SACSQ9NZJ4 4579 aa13.86□□□□□ -0.19
PTPA-202ENST00000347048 IGKV2-30P06310 120 aa13.85□□□□□ -0.19
PTPA-202ENST00000347048 KRTAP16-1A8MUX0 517 aa13.82□□□□□ -0.2
PTPA-202ENST00000347048 KRTAP1-4P0C5Y4 121 aa13.82□□□□□ -0.2
PTPA-202ENST00000347048 KMT2CQ8NEZ4 4911 aaKnown RBP13.82□□□□□ -0.2
PTPA-202ENST00000347048 PRR26Q8N8Z3 221 aa13.82□□□□□ -0.2
PTPA-202ENST00000347048 SPTSSBQ8NFR3 76 aa13.77□□□□□ -0.21
PTPA-202ENST00000347048 RETNLBQ9BQ08 111 aa13.73□□□□□ -0.21
PTPA-202ENST00000347048 SPINK7P58062 85 aa13.72□□□□□ -0.21
PTPA-202ENST00000347048 C4orf48Q5BLP8 95 aa13.72□□□□□ -0.21
PTPA-202ENST00000347048 LRP1BQ9NZR2 4599 aa13.7□□□□□ -0.22
PTPA-202ENST00000347048 PKD1P98161 4303 aa13.69□□□□□ -0.22
PTPA-202ENST00000347048 RYR2Q92736 4967 aa13.68□□□□□ -0.22
PTPA-202ENST00000347048 SPINK1P00995 79 aa13.68□□□□□ -0.22
PTPA-202ENST00000347048 PLA2G1BP04054 148 aaKnown RBP13.66□□□□□ -0.22
PTPA-202ENST00000347048 TYMSOSQ8TAI1 123 aa13.66□□□□□ -0.22
PTPA-202ENST00000347048 A6NN06 94 aa13.65□□□□□ -0.22
PTPA-202ENST00000347048 FAT2Q9NYQ8 4349 aa13.65□□□□□ -0.22
PTPA-202ENST00000347048 KTN1-AS1Q86SY8 53 aa13.64□□□□□ -0.23
PTPA-202ENST00000347048 RYR3Q15413 4870 aa13.6□□□□□ -0.23
PTPA-202ENST00000347048 RPS29P62273 56 aaKnown RBP13.58□□□□□ -0.24
PTPA-202ENST00000347048 IGKV2D-30A0A075B6S6 120 aa13.57□□□□□ -0.24
PTPA-202ENST00000347048 SEC61GP60059 68 aa13.56□□□□□ -0.24
PTPA-202ENST00000347048 A0A1B0GU69 56 aa13.55□□□□□ -0.24
PTPA-202ENST00000347048 VPS13BQ7Z7G8 4022 aa13.49□□□□□ -0.25
PTPA-202ENST00000347048 C7orf65Q6ZTY9 151 aa13.49□□□□□ -0.25
PTPA-202ENST00000347048 LINC00304Q8N9R0 145 aa13.49□□□□□ -0.25
PTPA-202ENST00000347048 SPATA8Q6RVD6 105 aa13.38□□□□□ -0.27
PTPA-202ENST00000347048 UQCR11O14957 56 aa13.33□□□□□ -0.28
PTPA-202ENST00000347048 A0A1B0GVY2 172 aa13.32□□□□□ -0.28
PTPA-202ENST00000347048 MIR22HGQ0VDD5 57 aa13.28□□□□□ -0.28
PTPA-202ENST00000347048 PKHD1P08F94 4074 aa13.26□□□□□ -0.29
PTPA-202ENST00000347048 C20orf166-AS1Q96NR2 134 aa13.24□□□□□ -0.29
PTPA-202ENST00000347048 A8MUU9 505 aa13.23□□□□□ -0.29
PTPA-202ENST00000347048 RBM12B-AS1Q9P1G2 102 aa13.23□□□□□ -0.29
PTPA-202ENST00000347048 Q8N1X5 172 aa13.22□□□□□ -0.29
PTPA-202ENST00000347048 SMR3BP02814 79 aaPredicted RBP13.18□□□□□ -0.3
PTPA-202ENST00000347048 DYNC1H1Q14204 4646 aaKnown RBP13.15□□□□□ -0.3
PTPA-202ENST00000347048 KRTAP10-4P60372 401 aaPredicted RBP13.14□□□□□ -0.31
PTPA-202ENST00000347048 PKHD1L1Q86WI1 4243 aa13.13□□□□□ -0.31
PTPA-202ENST00000347048 C9orf92A6NGG3 77 aa13.12□□□□□ -0.31
PTPA-202ENST00000347048 EPPK1P58107 5090 aaKnown RBP13.12□□□□□ -0.31
PTPA-202ENST00000347048 APOBP04114 4563 aaKnown RBP13.06□□□□□ -0.32
PTPA-202ENST00000347048 KRTAP3-1Q9BYR8 98 aa12.96□□□□□ -0.33
PTPA-202ENST00000347048 FAT1Q14517 4588 aa12.91□□□□□ -0.34
PTPA-202ENST00000347048 PRAC1Q96KF2 57 aa12.89□□□□□ -0.35
PTPA-202ENST00000347048 ADM2Q7Z4H4 148 aa12.85□□□□□ -0.35
PTPA-202ENST00000347048 COX6B2Q6YFQ2 88 aa12.84□□□□□ -0.35
PTPA-202ENST00000347048 KIAA1109Q2LD37 5005 aa12.82□□□□□ -0.36
PTPA-202ENST00000347048 HSPG2P98160 4391 aa12.8□□□□□ -0.36
PTPA-202ENST00000347048 H0YAA0 97 aa12.8□□□□□ -0.36
PTPA-202ENST00000347048 A0A1B0GU33 70 aa12.8□□□□□ -0.36
PTPA-202ENST00000347048 KRTAP17-1Q9BYP8 105 aa12.79□□□□□ -0.36
PTPA-202ENST00000347048 H1FX-AS1Q4G0G2 97 aa12.77□□□□□ -0.37
PTPA-202ENST00000347048 RYR1P21817 5038 aa12.77□□□□□ -0.37
PTPA-202ENST00000347048 FLG2Q5D862 2391 aaPredicted RBP12.7□□□□□ -0.38
PTPA-202ENST00000347048 BIRC6Q9NR09 4857 aa12.7□□□□□ -0.38
PTPA-202ENST00000347048 KRTAP10-8P60410 259 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms