RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 KRTAP4-16G5E9R7 235 aaPredicted RBP6.56□□□□□ -1.36
CLCN6-202ENST00000346436 MMP24-AS1A0A0U1RRL7 71 aa6.55□□□□□ -1.36
CLCN6-202ENST00000346436 SPANXA2-OT1Q8N9U9 137 aa6.55□□□□□ -1.36
CLCN6-202ENST00000346436 Q1T7F1 81 aa6.55□□□□□ -1.36
CLCN6-202ENST00000346436 R4GN34 69 aa6.54□□□□□ -1.36
CLCN6-202ENST00000346436 PANO1I0J062 215 aa6.53□□□□□ -1.36
CLCN6-202ENST00000346436 SPRR1BP22528 89 aa6.53□□□□□ -1.36
CLCN6-202ENST00000346436 KRTAP7-1Q8IUC3 87 aa6.53□□□□□ -1.36
CLCN6-202ENST00000346436 LINC00472Q9H8W2 130 aa6.52□□□□□ -1.37
CLCN6-202ENST00000346436 SPINK7P58062 85 aa6.51□□□□□ -1.37
CLCN6-202ENST00000346436 KRTAP11-1Q8IUC1 163 aa6.5□□□□□ -1.37
CLCN6-202ENST00000346436 NBPF19A0A087WUL8 3843 aa6.5□□□□□ -1.37
CLCN6-202ENST00000346436 Q8N9P0 234 aaPredicted RBP6.47□□□□□ -1.37
CLCN6-202ENST00000346436 VPS13CQ709C8 3753 aa6.46□□□□□ -1.38
CLCN6-202ENST00000346436 STAB2Q8WWQ8 2551 aa6.45□□□□□ -1.38
CLCN6-202ENST00000346436 ZFHX3Q15911 3703 aa6.45□□□□□ -1.38
CLCN6-202ENST00000346436 Q5VV11 94 aa6.44□□□□□ -1.38
CLCN6-202ENST00000346436 H3BS24 57 aa6.43□□□□□ -1.38
CLCN6-202ENST00000346436 RPS29P62273 56 aaKnown RBP6.43□□□□□ -1.38
CLCN6-202ENST00000346436 KMT2BQ9UMN6 2715 aaPredicted RBP6.43□□□□□ -1.38
CLCN6-202ENST00000346436 A0A1B0GU33 70 aa6.43□□□□□ -1.38
CLCN6-202ENST00000346436 LCA10Q71F78 164 aa6.42□□□□□ -1.38
CLCN6-202ENST00000346436 FLG2Q5D862 2391 aaPredicted RBP6.42□□□□□ -1.38
CLCN6-202ENST00000346436 LUZP6Q538Z0 58 aa6.42□□□□□ -1.38
CLCN6-202ENST00000346436 KTN1-AS1Q86SY8 53 aa6.41□□□□□ -1.38
CLCN6-202ENST00000346436 KRTAP29-1A8MX34 341 aaPredicted RBP6.4□□□□□ -1.38
CLCN6-202ENST00000346436 DMAC1Q96GE9 116 aa6.4□□□□□ -1.39
CLCN6-202ENST00000346436 TENM1Q9UKZ4 2725 aa6.39□□□□□ -1.39
CLCN6-202ENST00000346436 VWFP04275 2813 aa6.38□□□□□ -1.39
CLCN6-202ENST00000346436 A0A087X002 238 aa6.38□□□□□ -1.39
CLCN6-202ENST00000346436 NOTCH2NLQ7Z3S9 236 aa6.38□□□□□ -1.39
CLCN6-202ENST00000346436 TENM3Q9P273 2699 aa6.38□□□□□ -1.39
CLCN6-202ENST00000346436 Q75L30 129 aa6.37□□□□□ -1.39
CLCN6-202ENST00000346436 TENM4Q6N022 2769 aa6.37□□□□□ -1.39
CLCN6-202ENST00000346436 DMBT1Q9UGM3 2413 aaPredicted RBP6.37□□□□□ -1.39
CLCN6-202ENST00000346436 M0QZ58 72 aa6.35□□□□□ -1.39
CLCN6-202ENST00000346436 Q5W150 140 aa6.34□□□□□ -1.39
CLCN6-202ENST00000346436 LINC01558Q9Y6Z2 57 aa6.34□□□□□ -1.39
CLCN6-202ENST00000346436 PDZD2O15018 2839 aa6.32□□□□□ -1.4
CLCN6-202ENST00000346436 A8MU10 97 aa6.3□□□□□ -1.4
CLCN6-202ENST00000346436 Q6ZRN7 208 aaPredicted RBP6.3□□□□□ -1.4
CLCN6-202ENST00000346436 PRAC1Q96KF2 57 aa6.29□□□□□ -1.4
CLCN6-202ENST00000346436 FBN1P35555 2871 aaKnown RBP6.27□□□□□ -1.41
CLCN6-202ENST00000346436 H1FX-AS1Q4G0G2 97 aa6.27□□□□□ -1.41
CLCN6-202ENST00000346436 C20orf166-AS1Q96NR2 134 aa6.25□□□□□ -1.41
CLCN6-202ENST00000346436 OTOGQ6ZRI0 2925 aa6.24□□□□□ -1.41
CLCN6-202ENST00000346436 PKD1L1Q8TDX9 2849 aa6.22□□□□□ -1.41
CLCN6-202ENST00000346436 ASB16-AS1Q495Z4 193 aa6.22□□□□□ -1.41
CLCN6-202ENST00000346436 KRTAP13-1Q8IUC0 172 aa6.21□□□□□ -1.41
CLCN6-202ENST00000346436 RPL37P61927 97 aaKnown RBP6.21□□□□□ -1.42
CLCN6-202ENST00000346436 TRRAPQ9Y4A5 3859 aa6.2□□□□□ -1.42
CLCN6-202ENST00000346436 ADM2Q7Z4H4 148 aa6.2□□□□□ -1.42
CLCN6-202ENST00000346436 ANK3Q12955 4377 aaKnown RBP6.18□□□□□ -1.42
CLCN6-202ENST00000346436 ZNF469Q96JG9 3925 aaPredicted RBP6.14□□□□□ -1.43
CLCN6-202ENST00000346436 KRTAP13-2Q52LG2 175 aa6.11□□□□□ -1.43
CLCN6-202ENST00000346436 A8MUU9 505 aa6.08□□□□□ -1.44
CLCN6-202ENST00000346436 A6NN06 94 aa6.04□□□□□ -1.44
CLCN6-202ENST00000346436 SPATA8Q6RVD6 105 aa6.02□□□□□ -1.45
CLCN6-202ENST00000346436 TENM2Q9NT68 2774 aa6.02□□□□□ -1.45
CLCN6-202ENST00000346436 TPRXLQ17RH7 258 aa6.01□□□□□ -1.45
CLCN6-202ENST00000346436 A0A0A0MQY5 61 aa6.01□□□□□ -1.45
CLCN6-202ENST00000346436 AKAP9Q99996 3911 aa6□□□□□ -1.45
CLCN6-202ENST00000346436 TGP01266 2768 aa5.99□□□□□ -1.45
CLCN6-202ENST00000346436 ROMO1P60602 79 aa5.99□□□□□ -1.45
CLCN6-202ENST00000346436 SRRM2Q9UQ35 2752 aaKnown RBP5.96□□□□□ -1.45
CLCN6-202ENST00000346436 PRO2289Q9P1D8 64 aa5.94□□□□□ -1.46
CLCN6-202ENST00000346436 TNP1P09430 55 aa5.92□□□□□ -1.46
CLCN6-202ENST00000346436 XP32Q5T750 250 aa5.9□□□□□ -1.46
CLCN6-202ENST00000346436 CSMD3Q7Z407 3707 aa5.9□□□□□ -1.46
CLCN6-202ENST00000346436 KRTAP10-10P60014 251 aa5.9□□□□□ -1.47
CLCN6-202ENST00000346436 KRTAP1-4P0C5Y4 121 aa5.88□□□□□ -1.47
CLCN6-202ENST00000346436 KRTAP10-8P60410 259 aa5.84□□□□□ -1.48
CLCN6-202ENST00000346436 FBN3Q75N90 2809 aa5.81□□□□□ -1.48
CLCN6-202ENST00000346436 A0A1B0GVY2 172 aa5.81□□□□□ -1.48
CLCN6-202ENST00000346436 KRTAP16-1A8MUX0 517 aa5.8□□□□□ -1.48
CLCN6-202ENST00000346436 KRTAP13-3Q3SY46 172 aa5.76□□□□□ -1.49
CLCN6-202ENST00000346436 HUWE1Q7Z6Z7 4374 aaKnown RBP5.74□□□□□ -1.49
CLCN6-202ENST00000346436 KRTAP25-1Q3LHN0 102 aa5.73□□□□□ -1.49
CLCN6-202ENST00000346436 COL7A1Q02388 2944 aa5.72□□□□□ -1.49
CLCN6-202ENST00000346436 H0YAA0 97 aa5.7□□□□□ -1.5
CLCN6-202ENST00000346436 MEGF8Q7Z7M0 2845 aa5.69□□□□□ -1.5
CLCN6-202ENST00000346436 PP632Q6XCG6 107 aa5.64□□□□□ -1.51
CLCN6-202ENST00000346436 DNAH10Q8IVF4 4471 aa5.59□□□□□ -1.51
CLCN6-202ENST00000346436 C10orf95Q9H7T3 257 aa5.58□□□□□ -1.52
CLCN6-202ENST00000346436 P0C880 135 aa5.5□□□□□ -1.53
CLCN6-202ENST00000346436 KRTAP3-1Q9BYR8 98 aa5.48□□□□□ -1.53
CLCN6-202ENST00000346436 DNAH9Q9NYC9 4486 aa5.48□□□□□ -1.53
CLCN6-202ENST00000346436 NDUFAF8A1L188 74 aa5.48□□□□□ -1.53
CLCN6-202ENST00000346436 PLECQ15149 4684 aaKnown RBP5.46□□□□□ -1.53
CLCN6-202ENST00000346436 DNAH1Q9P2D7 4330 aa5.4□□□□□ -1.54
CLCN6-202ENST00000346436 ANK2Q01484 3957 aa5.39□□□□□ -1.55
CLCN6-202ENST00000346436 LYSTQ99698 3801 aa5.34□□□□□ -1.56
CLCN6-202ENST00000346436 KRTAP12-2P59991 146 aa5.34□□□□□ -1.56
CLCN6-202ENST00000346436 DNAH11Q96DT5 4516 aa5.32□□□□□ -1.56
CLCN6-202ENST00000346436 KRTAP13-4Q3LI77 160 aa5.31□□□□□ -1.56
CLCN6-202ENST00000346436 STARD9Q9P2P6 4700 aa5.31□□□□□ -1.56
CLCN6-202ENST00000346436 KRTAP10-6P60371 365 aaPredicted RBP5.25□□□□□ -1.57
CLCN6-202ENST00000346436 CMYA5Q8N3K9 4069 aa5.24□□□□□ -1.57
CLCN6-202ENST00000346436 KMT2AQ03164 3969 aa5.24□□□□□ -1.57
CLCN6-202ENST00000346436 DNAH8Q96JB1 4490 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms