RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 VPS13DQ5THJ4 4388 aa12.89□□□□□ -0.35
TRIM3-201ENST00000345851 NBDYA0A0U1RRE5 68 aa12.88□□□□□ -0.35
TRIM3-201ENST00000345851 A0A087X002 238 aa12.87□□□□□ -0.35
TRIM3-201ENST00000345851 NOTCH2NLQ7Z3S9 236 aa12.87□□□□□ -0.35
TRIM3-201ENST00000345851 A0A1B0GVX0 72 aa12.85□□□□□ -0.35
TRIM3-201ENST00000345851 DNAH2Q9P225 4427 aa12.84□□□□□ -0.35
TRIM3-201ENST00000345851 MRPL34Q9BQ48 92 aaKnown RBP12.83□□□□□ -0.35
TRIM3-201ENST00000345851 CDK2AP2O75956 126 aa12.83□□□□□ -0.36
TRIM3-201ENST00000345851 PANO1I0J062 215 aa12.83□□□□□ -0.36
TRIM3-201ENST00000345851 PRAC1Q96KF2 57 aa12.82□□□□□ -0.36
TRIM3-201ENST00000345851 LINC00313P59037 77 aa12.78□□□□□ -0.36
TRIM3-201ENST00000345851 KRTAP13-1Q8IUC0 172 aa12.78□□□□□ -0.36
TRIM3-201ENST00000345851 Q6ZRN7 208 aaPredicted RBP12.77□□□□□ -0.37
TRIM3-201ENST00000345851 ANAPC11Q9NYG5 84 aa12.75□□□□□ -0.37
TRIM3-201ENST00000345851 Q5W150 140 aa12.75□□□□□ -0.37
TRIM3-201ENST00000345851 ADM2Q7Z4H4 148 aa12.73□□□□□ -0.37
TRIM3-201ENST00000345851 SPINK6Q6UWN8 80 aa12.72□□□□□ -0.37
TRIM3-201ENST00000345851 C14orf177Q52M58 125 aa12.71□□□□□ -0.37
TRIM3-201ENST00000345851 HECTD4Q9Y4D8 3996 aa12.7□□□□□ -0.38
TRIM3-201ENST00000345851 LY6G6CO95867 125 aa12.68□□□□□ -0.38
TRIM3-201ENST00000345851 C8orf87E5RJ46 101 aa12.67□□□□□ -0.38
TRIM3-201ENST00000345851 ACYP2P14621 99 aa12.64□□□□□ -0.39
TRIM3-201ENST00000345851 WWC2-AS2Q96NR7 200 aa12.64□□□□□ -0.39
TRIM3-201ENST00000345851 C4orf48Q5BLP8 95 aa12.63□□□□□ -0.39
TRIM3-201ENST00000345851 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.63□□□□□ -0.39
TRIM3-201ENST00000345851 HYDINQ4G0P3 5121 aa12.63□□□□□ -0.39
TRIM3-201ENST00000345851 A0A087WTM6 91 aa12.62□□□□□ -0.39
TRIM3-201ENST00000345851 FRAS1Q86XX4 4008 aa12.61□□□□□ -0.39
TRIM3-201ENST00000345851 LINC00483Q53H64 154 aa12.6□□□□□ -0.39
TRIM3-201ENST00000345851 DNAH6Q9C0G6 4158 aa12.58□□□□□ -0.39
TRIM3-201ENST00000345851 KRTAP13-3Q3SY46 172 aa12.58□□□□□ -0.4
TRIM3-201ENST00000345851 RETNLBQ9BQ08 111 aa12.57□□□□□ -0.4
TRIM3-201ENST00000345851 A0A1B0GU69 56 aa12.56□□□□□ -0.4
TRIM3-201ENST00000345851 DNAH17Q9UFH2 4485 aa12.55□□□□□ -0.4
TRIM3-201ENST00000345851 ALMS1Q8TCU4 4167 aa12.53□□□□□ -0.4
TRIM3-201ENST00000345851 RTL8CO15255 209 aa12.52□□□□□ -0.4
TRIM3-201ENST00000345851 ZNF706Q9Y5V0 76 aaPredicted RBP12.52□□□□□ -0.4
TRIM3-201ENST00000345851 C1orf134Q5TEV5 83 aa12.52□□□□□ -0.41
TRIM3-201ENST00000345851 SPACA4Q8TDM5 124 aa12.52□□□□□ -0.41
TRIM3-201ENST00000345851 PSORS1C2Q9UIG4 136 aa12.51□□□□□ -0.41
TRIM3-201ENST00000345851 DNAH8Q96JB1 4490 aa12.51□□□□□ -0.41
TRIM3-201ENST00000345851 PLA2G1BP04054 148 aaKnown RBP12.5□□□□□ -0.41
TRIM3-201ENST00000345851 DMAC1Q96GE9 116 aa12.5□□□□□ -0.41
TRIM3-201ENST00000345851 CIRBP-AS1Q8TBR5 109 aa12.47□□□□□ -0.41
TRIM3-201ENST00000345851 LINC01554Q52M75 96 aa12.46□□□□□ -0.41
TRIM3-201ENST00000345851 DNAH11Q96DT5 4516 aa12.46□□□□□ -0.41
TRIM3-201ENST00000345851 DNAH5Q8TE73 4624 aa12.45□□□□□ -0.42
TRIM3-201ENST00000345851 IGLV5-52A0A0A0MRZ9 124 aa12.44□□□□□ -0.42
TRIM3-201ENST00000345851 SPATA8Q6RVD6 105 aa12.44□□□□□ -0.42
TRIM3-201ENST00000345851 H3BS24 57 aa12.42□□□□□ -0.42
TRIM3-201ENST00000345851 MIR22HGQ0VDD5 57 aa12.42□□□□□ -0.42
TRIM3-201ENST00000345851 KRTAP21-3Q3LHN1 58 aa12.41□□□□□ -0.42
TRIM3-201ENST00000345851 ZNF861PO60384 105 aa12.4□□□□□ -0.42
TRIM3-201ENST00000345851 KRTAP10-2P60368 255 aa12.39□□□□□ -0.43
TRIM3-201ENST00000345851 UQCR11O14957 56 aa12.37□□□□□ -0.43
TRIM3-201ENST00000345851 FAT2Q9NYQ8 4349 aa12.34□□□□□ -0.43
TRIM3-201ENST00000345851 FAM229AH3BQW9 127 aa12.32□□□□□ -0.44
TRIM3-201ENST00000345851 IGKV2-30P06310 120 aa12.3□□□□□ -0.44
TRIM3-201ENST00000345851 CSAG1Q6PB30 78 aa12.3□□□□□ -0.44
TRIM3-201ENST00000345851 SACSQ9NZJ4 4579 aa12.29□□□□□ -0.44
TRIM3-201ENST00000345851 PKD1P98161 4303 aa12.28□□□□□ -0.44
TRIM3-201ENST00000345851 IGKV2D-30A0A075B6S6 120 aa12.26□□□□□ -0.45
TRIM3-201ENST00000345851 LRP1BQ9NZR2 4599 aa12.24□□□□□ -0.45
TRIM3-201ENST00000345851 PKHD1P08F94 4074 aa12.23□□□□□ -0.45
TRIM3-201ENST00000345851 IGLV7-43P04211 117 aa12.18□□□□□ -0.46
TRIM3-201ENST00000345851 SPINK1P00995 79 aa12.18□□□□□ -0.46
TRIM3-201ENST00000345851 KRTAP10-1P60331 282 aa12.18□□□□□ -0.46
TRIM3-201ENST00000345851 SSBP3-AS1Q7Z2R9 100 aa12.12□□□□□ -0.47
TRIM3-201ENST00000345851 VPS13BQ7Z7G8 4022 aa12.09□□□□□ -0.47
TRIM3-201ENST00000345851 KMT2CQ8NEZ4 4911 aaKnown RBP12.08□□□□□ -0.48
TRIM3-201ENST00000345851 KRTAP16-1A8MUX0 517 aa12.07□□□□□ -0.48
TRIM3-201ENST00000345851 Q8N1X5 172 aa12.03□□□□□ -0.48
TRIM3-201ENST00000345851 KRTAP13-2Q52LG2 175 aa12□□□□□ -0.49
TRIM3-201ENST00000345851 Q6ZSA8 131 aa11.98□□□□□ -0.49
TRIM3-201ENST00000345851 DYNC1H1Q14204 4646 aaKnown RBP11.95□□□□□ -0.5
TRIM3-201ENST00000345851 RYR2Q92736 4967 aa11.91□□□□□ -0.5
TRIM3-201ENST00000345851 FAT1Q14517 4588 aa11.9□□□□□ -0.5
TRIM3-201ENST00000345851 H0YAA0 97 aa11.89□□□□□ -0.51
TRIM3-201ENST00000345851 FLG2Q5D862 2391 aaPredicted RBP11.88□□□□□ -0.51
TRIM3-201ENST00000345851 SMR3BP02814 79 aaPredicted RBP11.88□□□□□ -0.51
TRIM3-201ENST00000345851 A8MUU9 505 aa11.84□□□□□ -0.51
TRIM3-201ENST00000345851 TYMSOSQ8TAI1 123 aa11.83□□□□□ -0.52
TRIM3-201ENST00000345851 LINC00304Q8N9R0 145 aa11.81□□□□□ -0.52
TRIM3-201ENST00000345851 KRTAP25-1Q3LHN0 102 aa11.79□□□□□ -0.52
TRIM3-201ENST00000345851 APOBP04114 4563 aaKnown RBP11.77□□□□□ -0.53
TRIM3-201ENST00000345851 CRIPTQ9P021 101 aa11.74□□□□□ -0.53
TRIM3-201ENST00000345851 RYR3Q15413 4870 aa11.73□□□□□ -0.53
TRIM3-201ENST00000345851 KRTAP1-4P0C5Y4 121 aa11.72□□□□□ -0.53
TRIM3-201ENST00000345851 A0A1B0GVY2 172 aa11.72□□□□□ -0.53
TRIM3-201ENST00000345851 A0A1B0GU33 70 aa11.71□□□□□ -0.54
TRIM3-201ENST00000345851 ROMO1P60602 79 aa11.68□□□□□ -0.54
TRIM3-201ENST00000345851 H1FX-AS1Q4G0G2 97 aa11.62□□□□□ -0.55
TRIM3-201ENST00000345851 KRTAP3-1Q9BYR8 98 aa11.56□□□□□ -0.56
TRIM3-201ENST00000345851 C9orf92A6NGG3 77 aa11.53□□□□□ -0.56
TRIM3-201ENST00000345851 LRP1Q07954 4544 aaKnown RBP11.46□□□□□ -0.57
TRIM3-201ENST00000345851 KRTAP10-4P60372 401 aaPredicted RBP11.46□□□□□ -0.57
TRIM3-201ENST00000345851 K7ERS5 55 aa11.46□□□□□ -0.57
TRIM3-201ENST00000345851 HSPG2P98160 4391 aa11.43□□□□□ -0.58
TRIM3-201ENST00000345851 COX6B2Q6YFQ2 88 aa11.42□□□□□ -0.58
TRIM3-201ENST00000345851 P0C880 135 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms