RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 ANKRD29Q8N6D5 301 aa6.46□□□□□ -1.38
SGCA-202ENST00000344627 F8W1H4 67 aa6.45□□□□□ -1.38
SGCA-202ENST00000344627 DSCR10P59022 87 aa6.45□□□□□ -1.38
SGCA-202ENST00000344627 A0A1W2PNM2 257 aa6.44□□□□□ -1.38
SGCA-202ENST00000344627 C20orf166-AS1Q96NR2 134 aa6.43□□□□□ -1.38
SGCA-202ENST00000344627 A8MUU9 505 aa6.42□□□□□ -1.38
SGCA-202ENST00000344627 IGKV4-1P06312 121 aa6.42□□□□□ -1.38
SGCA-202ENST00000344627 PDE6GP18545 87 aa6.42□□□□□ -1.38
SGCA-202ENST00000344627 RBM3P98179 157 aaKnown RBP6.42□□□□□ -1.38
SGCA-202ENST00000344627 DSCR8Q96T75 97 aa6.42□□□□□ -1.38
SGCA-202ENST00000344627 A0A1B0GV90 55 aa6.41□□□□□ -1.38
SGCA-202ENST00000344627 H3BS24 57 aa6.41□□□□□ -1.38
SGCA-202ENST00000344627 LINC00313P59037 77 aa6.41□□□□□ -1.38
SGCA-202ENST00000344627 TRBV7-4A0A0J9YYF1 115 aa6.39□□□□□ -1.39
SGCA-202ENST00000344627 DEFB116Q30KQ4 102 aa6.39□□□□□ -1.39
SGCA-202ENST00000344627 CCKP06307 115 aa6.38□□□□□ -1.39
SGCA-202ENST00000344627 PRO0461Q9UI25 63 aa6.38□□□□□ -1.39
SGCA-202ENST00000344627 MTURNQ8N3F0 131 aa6.37□□□□□ -1.39
SGCA-202ENST00000344627 VPS25Q9BRG1 176 aa6.37□□□□□ -1.39
SGCA-202ENST00000344627 LOC110117498A0A087WWA1 95 aa6.36□□□□□ -1.39
SGCA-202ENST00000344627 A0A1B0GW54 56 aa6.36□□□□□ -1.39
SGCA-202ENST00000344627 IGHV6-1A0A0B4J1U7 121 aa6.35□□□□□ -1.39
SGCA-202ENST00000344627 FAM236DA0A1B0GTK5 79 aa6.34□□□□□ -1.39
SGCA-202ENST00000344627 FAM236CP0DP71 79 aa6.34□□□□□ -1.39
SGCA-202ENST00000344627 NOTCH2NLQ7Z3S9 236 aa6.33□□□□□ -1.4
SGCA-202ENST00000344627 LINC00472Q9H8W2 130 aa6.32□□□□□ -1.4
SGCA-202ENST00000344627 C14orf132Q9NPU4 83 aa6.32□□□□□ -1.4
SGCA-202ENST00000344627 ETDBQ3ZM63 59 aa6.31□□□□□ -1.4
SGCA-202ENST00000344627 Q6ZQT0 140 aa6.31□□□□□ -1.4
SGCA-202ENST00000344627 KRTAP16-1A8MUX0 517 aa6.3□□□□□ -1.4
SGCA-202ENST00000344627 KRTAP9-8Q9BYQ0 159 aa6.29□□□□□ -1.4
SGCA-202ENST00000344627 RBM12B-AS1Q9P1G2 102 aa6.28□□□□□ -1.4
SGCA-202ENST00000344627 A0A1B0GVX0 72 aa6.27□□□□□ -1.41
SGCA-202ENST00000344627 KRTAP9-7A8MTY7 169 aa6.27□□□□□ -1.41
SGCA-202ENST00000344627 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.26□□□□□ -1.41
SGCA-202ENST00000344627 C8orf87E5RJ46 101 aa6.26□□□□□ -1.41
SGCA-202ENST00000344627 J3QR89 54 aa6.26□□□□□ -1.41
SGCA-202ENST00000344627 ACYP1P07311 99 aa6.25□□□□□ -1.41
SGCA-202ENST00000344627 J3KT08 172 aa6.23□□□□□ -1.41
SGCA-202ENST00000344627 FAM240AA0A1B0GVK7 77 aa6.22□□□□□ -1.41
SGCA-202ENST00000344627 NDUFB1O75438 58 aa6.22□□□□□ -1.41
SGCA-202ENST00000344627 HRES1P13985 223 aa6.21□□□□□ -1.42
SGCA-202ENST00000344627 NREPQ16612 68 aa6.2□□□□□ -1.42
SGCA-202ENST00000344627 UBL5Q9BZL1 73 aa6.2□□□□□ -1.42
SGCA-202ENST00000344627 ZCCHC13Q8WW36 166 aaKnown RBP6.19□□□□□ -1.42
SGCA-202ENST00000344627 LINC00846Q9NV44 126 aa6.19□□□□□ -1.42
SGCA-202ENST00000344627 MPLKIPQ8TAP9 179 aa6.18□□□□□ -1.42
SGCA-202ENST00000344627 USH2AO75445 5202 aa6.17□□□□□ -1.42
SGCA-202ENST00000344627 K7ERU9 68 aa6.17□□□□□ -1.42
SGCA-202ENST00000344627 MT2AP02795 61 aa6.16□□□□□ -1.42
SGCA-202ENST00000344627 SPINK7P58062 85 aa6.16□□□□□ -1.42
SGCA-202ENST00000344627 C8orf17Q9NRJ1 99 aa6.15□□□□□ -1.42
SGCA-202ENST00000344627 SSPOA2VEC9 5147 aa6.14□□□□□ -1.43
SGCA-202ENST00000344627 A8MWP4 228 aa6.14□□□□□ -1.43
SGCA-202ENST00000344627 KRTAP10-10P60014 251 aa6.13□□□□□ -1.43
SGCA-202ENST00000344627 Q6ZVQ6 151 aa6.13□□□□□ -1.43
SGCA-202ENST00000344627 IGKV3D-7A0A0C4DH55 119 aa6.12□□□□□ -1.43
SGCA-202ENST00000344627 BPY2O14599 106 aa6.12□□□□□ -1.43
SGCA-202ENST00000344627 Q8N9P0 234 aaPredicted RBP6.12□□□□□ -1.43
SGCA-202ENST00000344627 ATP5EP2Q5VTU8 51 aa6.11□□□□□ -1.43
SGCA-202ENST00000344627 KRTAP9-3Q9BYQ3 159 aa6.1□□□□□ -1.43
SGCA-202ENST00000344627 MT1FP04733 61 aa6.09□□□□□ -1.43
SGCA-202ENST00000344627 CXCL6P80162 114 aa6.09□□□□□ -1.43
SGCA-202ENST00000344627 WFDC13Q8IUB5 93 aa6.09□□□□□ -1.43
SGCA-202ENST00000344627 KRTAP19-1Q8IUB9 90 aa6.09□□□□□ -1.43
SGCA-202ENST00000344627 FCGBPQ9Y6R7 5405 aaPredicted RBP6.09□□□□□ -1.43
SGCA-202ENST00000344627 MACF1Q9UPN3 7388 aaKnown RBP6.09□□□□□ -1.44
SGCA-202ENST00000344627 LINC00643Q86TS7 51 aa6.08□□□□□ -1.44
SGCA-202ENST00000344627 PRR15Q8IV56 129 aa6.08□□□□□ -1.44
SGCA-202ENST00000344627 NDUFS5O43920 106 aa6.06□□□□□ -1.44
SGCA-202ENST00000344627 MRPL34Q9BQ48 92 aaKnown RBP6.04□□□□□ -1.44
SGCA-202ENST00000344627 TMEM254Q8TBM7 123 aa6.03□□□□□ -1.44
SGCA-202ENST00000344627 MMP24-AS1A0A0U1RRL7 71 aa6.02□□□□□ -1.45
SGCA-202ENST00000344627 hDV103S1A0JD37 113 aa6.02□□□□□ -1.45
SGCA-202ENST00000344627 SYNE2Q8WXH0 6885 aaKnown RBP6.01□□□□□ -1.45
SGCA-202ENST00000344627 K7EQZ3 153 aa6□□□□□ -1.45
SGCA-202ENST00000344627 KRTAP19-6Q3LI70 58 aa5.99□□□□□ -1.45
SGCA-202ENST00000344627 IGKV2D-30A0A075B6S6 120 aa5.97□□□□□ -1.45
SGCA-202ENST00000344627 IGKV2-30P06310 120 aa5.97□□□□□ -1.45
SGCA-202ENST00000344627 HIST1H4AP62805 103 aaKnown RBP5.96□□□□□ -1.46
SGCA-202ENST00000344627 IMUPQ9GZP8 106 aa5.96□□□□□ -1.46
SGCA-202ENST00000344627 HCG22E2RYF7 251 aa5.95□□□□□ -1.46
SGCA-202ENST00000344627 H1FX-AS1Q4G0G2 97 aa5.95□□□□□ -1.46
SGCA-202ENST00000344627 CASC2Q6XLA1 102 aa5.94□□□□□ -1.46
SGCA-202ENST00000344627 Q8N9L7 120 aa5.94□□□□□ -1.46
SGCA-202ENST00000344627 Q5W150 140 aa5.91□□□□□ -1.46
SGCA-202ENST00000344627 C7orf65Q6ZTY9 151 aa5.91□□□□□ -1.46
SGCA-202ENST00000344627 TP53AIP1Q9HCN2 124 aa5.87□□□□□ -1.47
SGCA-202ENST00000344627 MT-ATP8P03928 68 aa5.86□□□□□ -1.47
SGCA-202ENST00000344627 KRTAP6-3Q3LI67 103 aa5.86□□□□□ -1.47
SGCA-202ENST00000344627 C4orf26Q17RF5 130 aa5.85□□□□□ -1.47
SGCA-202ENST00000344627 A0A087WVE0 104 aa5.84□□□□□ -1.47
SGCA-202ENST00000344627 SCGB1A1P11684 91 aa5.83□□□□□ -1.48
SGCA-202ENST00000344627 SMIM20Q8N5G0 67 aa5.81□□□□□ -1.48
SGCA-202ENST00000344627 UQCRQO14949 82 aa5.79□□□□□ -1.48
SGCA-202ENST00000344627 C5orf47Q569G3 176 aa5.78□□□□□ -1.48
SGCA-202ENST00000344627 FAM236AA0A1B0GUQ0 79 aa5.77□□□□□ -1.49
SGCA-202ENST00000344627 FAM236BA0A1B0GV22 79 aa5.77□□□□□ -1.49
SGCA-202ENST00000344627 ATOX1O00244 68 aa5.76□□□□□ -1.49
SGCA-202ENST00000344627 TRAV22A0A0B4J277 110 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms