RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 NDUFC1O43677 76 aa4.73□□□□□ -1.65
HMGCR-202ENST00000343975 RETNLBQ9BQ08 111 aa4.73□□□□□ -1.65
HMGCR-202ENST00000343975 TRAV7A0A075B6U4 112 aa4.71□□□□□ -1.66
HMGCR-202ENST00000343975 OBSCN-AS1Q96MR7 158 aa4.71□□□□□ -1.66
HMGCR-202ENST00000343975 SRRM2Q9UQ35 2752 aaKnown RBP4.71□□□□□ -1.66
HMGCR-202ENST00000343975 FRAS1Q86XX4 4008 aa4.7□□□□□ -1.66
HMGCR-202ENST00000343975 PKD1P98161 4303 aa4.7□□□□□ -1.66
HMGCR-202ENST00000343975 RYR1P21817 5038 aa4.7□□□□□ -1.66
HMGCR-202ENST00000343975 IGHV6-1A0A0B4J1U7 121 aa4.7□□□□□ -1.66
HMGCR-202ENST00000343975 DEFB116Q30KQ4 102 aa4.69□□□□□ -1.66
HMGCR-202ENST00000343975 Q6ZVQ6 151 aa4.69□□□□□ -1.66
HMGCR-202ENST00000343975 PKHD1P08F94 4074 aa4.68□□□□□ -1.66
HMGCR-202ENST00000343975 C8orf87E5RJ46 101 aa4.68□□□□□ -1.66
HMGCR-202ENST00000343975 NDUFS5O43920 106 aa4.68□□□□□ -1.66
HMGCR-202ENST00000343975 HECTD4Q9Y4D8 3996 aa4.68□□□□□ -1.66
HMGCR-202ENST00000343975 H7BZZ5 65 aa4.67□□□□□ -1.66
HMGCR-202ENST00000343975 ASB16-AS1Q495Z4 193 aa4.67□□□□□ -1.66
HMGCR-202ENST00000343975 EPPK1P58107 5090 aaKnown RBP4.67□□□□□ -1.66
HMGCR-202ENST00000343975 MT1HL1P0DM35 61 aa4.67□□□□□ -1.66
HMGCR-202ENST00000343975 LINC00313P59037 77 aa4.67□□□□□ -1.66
HMGCR-202ENST00000343975 DNAH8Q96JB1 4490 aa4.66□□□□□ -1.66
HMGCR-202ENST00000343975 APOBP04114 4563 aaKnown RBP4.66□□□□□ -1.66
HMGCR-202ENST00000343975 KLKP1Q107X0 134 aa4.66□□□□□ -1.66
HMGCR-202ENST00000343975 PMAIP1Q13794 54 aa4.66□□□□□ -1.66
HMGCR-202ENST00000343975 MPLKIPQ8TAP9 179 aa4.66□□□□□ -1.66
HMGCR-202ENST00000343975 SNURFQ9Y675 71 aa4.66□□□□□ -1.66
HMGCR-202ENST00000343975 FAT1Q14517 4588 aa4.66□□□□□ -1.66
HMGCR-202ENST00000343975 A8MWP4 228 aa4.65□□□□□ -1.67
HMGCR-202ENST00000343975 C9orf92A6NGG3 77 aa4.64□□□□□ -1.67
HMGCR-202ENST00000343975 A0A1B0GVX0 72 aa4.64□□□□□ -1.67
HMGCR-202ENST00000343975 Q96NJ1 140 aa4.64□□□□□ -1.67
HMGCR-202ENST00000343975 CXCL6P80162 114 aa4.62□□□□□ -1.67
HMGCR-202ENST00000343975 KRTAP17-1Q9BYP8 105 aa4.62□□□□□ -1.67
HMGCR-202ENST00000343975 LINC00472Q9H8W2 130 aa4.62□□□□□ -1.67
HMGCR-202ENST00000343975 WFDC13Q8IUB5 93 aa4.61□□□□□ -1.67
HMGCR-202ENST00000343975 ATP11AUNQ6ZP68 121 aa4.61□□□□□ -1.67
HMGCR-202ENST00000343975 DSCR10P59022 87 aa4.61□□□□□ -1.67
HMGCR-202ENST00000343975 CASC2Q6XLA1 102 aa4.6□□□□□ -1.67
HMGCR-202ENST00000343975 PRR15Q8IV56 129 aa4.6□□□□□ -1.67
HMGCR-202ENST00000343975 HSPG2P98160 4391 aa4.6□□□□□ -1.67
HMGCR-202ENST00000343975 SEC61BP60468 96 aaKnown RBP4.59□□□□□ -1.67
HMGCR-202ENST00000343975 C8orf17Q9NRJ1 99 aa4.59□□□□□ -1.67
HMGCR-202ENST00000343975 hDV103S1A0JD37 113 aa4.59□□□□□ -1.68
HMGCR-202ENST00000343975 TMEM254Q8TBM7 123 aa4.58□□□□□ -1.68
HMGCR-202ENST00000343975 HCG22E2RYF7 251 aa4.58□□□□□ -1.68
HMGCR-202ENST00000343975 HERC2O95714 4834 aa4.57□□□□□ -1.68
HMGCR-202ENST00000343975 K7EQZ3 153 aa4.57□□□□□ -1.68
HMGCR-202ENST00000343975 TPRXLQ17RH7 258 aa4.57□□□□□ -1.68
HMGCR-202ENST00000343975 Q8N9L7 120 aa4.57□□□□□ -1.68
HMGCR-202ENST00000343975 MRPL34Q9BQ48 92 aaKnown RBP4.56□□□□□ -1.68
HMGCR-202ENST00000343975 VPS13BQ7Z7G8 4022 aa4.54□□□□□ -1.68
HMGCR-202ENST00000343975 TP53AIP1Q9HCN2 124 aa4.52□□□□□ -1.69
HMGCR-202ENST00000343975 MP68P56378 58 aa4.52□□□□□ -1.69
HMGCR-202ENST00000343975 KRTAP13-3Q3SY46 172 aa4.51□□□□□ -1.69
HMGCR-202ENST00000343975 MMP24-AS1A0A0U1RRL7 71 aa4.49□□□□□ -1.69
HMGCR-202ENST00000343975 PSPHP1O15172 72 aa4.49□□□□□ -1.69
HMGCR-202ENST00000343975 Q1T7F1 81 aa4.48□□□□□ -1.69
HMGCR-202ENST00000343975 Q75L30 129 aa4.48□□□□□ -1.69
HMGCR-202ENST00000343975 RPL37P61927 97 aaKnown RBP4.48□□□□□ -1.69
HMGCR-202ENST00000343975 XP32Q5T750 250 aa4.48□□□□□ -1.69
HMGCR-202ENST00000343975 PCOTHQ58A44 107 aa4.46□□□□□ -1.7
HMGCR-202ENST00000343975 KTN1-AS1Q86SY8 53 aa4.46□□□□□ -1.7
HMGCR-202ENST00000343975 IGKV2D-30A0A075B6S6 120 aa4.45□□□□□ -1.7
HMGCR-202ENST00000343975 IGKV2-30P06310 120 aa4.45□□□□□ -1.7
HMGCR-202ENST00000343975 SPTSSBQ8NFR3 76 aa4.45□□□□□ -1.7
HMGCR-202ENST00000343975 ZCCHC13Q8WW36 166 aaKnown RBP4.45□□□□□ -1.7
HMGCR-202ENST00000343975 COX6B2Q6YFQ2 88 aa4.45□□□□□ -1.7
HMGCR-202ENST00000343975 TRAV22A0A0B4J277 110 aa4.44□□□□□ -1.7
HMGCR-202ENST00000343975 C20orf166-AS1Q96NR2 134 aa4.44□□□□□ -1.7
HMGCR-202ENST00000343975 ABCA13Q86UQ4 5058 aa4.44□□□□□ -1.7
HMGCR-202ENST00000343975 A8MUU9 505 aa4.43□□□□□ -1.7
HMGCR-202ENST00000343975 CHKB-CPT1BH3BT56 60 aa4.43□□□□□ -1.7
HMGCR-202ENST00000343975 NOTCH2NLQ7Z3S9 236 aa4.43□□□□□ -1.7
HMGCR-202ENST00000343975 C1orf64Q8NEQ6 169 aa4.43□□□□□ -1.7
HMGCR-202ENST00000343975 OCR1Q9BZK8 76 aa4.43□□□□□ -1.7
HMGCR-202ENST00000343975 LRP1Q07954 4544 aaKnown RBP4.43□□□□□ -1.7
HMGCR-202ENST00000343975 H0Y9P7 68 aa4.42□□□□□ -1.7
HMGCR-202ENST00000343975 RBM12B-AS1Q9P1G2 102 aa4.42□□□□□ -1.7
HMGCR-202ENST00000343975 C7orf65Q6ZTY9 151 aa4.42□□□□□ -1.7
HMGCR-202ENST00000343975 Q8N9P0 234 aaPredicted RBP4.42□□□□□ -1.7
HMGCR-202ENST00000343975 MYCBP2O75592 4640 aa4.41□□□□□ -1.7
HMGCR-202ENST00000343975 A8MUN3 132 aa4.41□□□□□ -1.7
HMGCR-202ENST00000343975 LOC101927531A0A1B0GV80 90 aa4.4□□□□□ -1.71
HMGCR-202ENST00000343975 LINC00208Q96KT6 92 aa4.4□□□□□ -1.71
HMGCR-202ENST00000343975 A6NED7 52 aa4.39□□□□□ -1.71
HMGCR-202ENST00000343975 FAT3Q8TDW7 4589 aa4.38□□□□□ -1.71
HMGCR-202ENST00000343975 H3BPC8 53 aa4.38□□□□□ -1.71
HMGCR-202ENST00000343975 CYP4F30PQ9H0H9 118 aa4.38□□□□□ -1.71
HMGCR-202ENST00000343975 PRR15LQ9BU68 103 aa4.37□□□□□ -1.71
HMGCR-202ENST00000343975 PCLOQ9Y6V0 5065 aa4.37□□□□□ -1.71
HMGCR-202ENST00000343975 SPINK7P58062 85 aa4.37□□□□□ -1.71
HMGCR-202ENST00000343975 KRTAP16-1A8MUX0 517 aa4.36□□□□□ -1.71
HMGCR-202ENST00000343975 PKHD1L1Q86WI1 4243 aa4.34□□□□□ -1.71
HMGCR-202ENST00000343975 Q5VV11 94 aa4.34□□□□□ -1.72
HMGCR-202ENST00000343975 Q5W150 140 aa4.33□□□□□ -1.72
HMGCR-202ENST00000343975 LCA10Q71F78 164 aa4.33□□□□□ -1.72
HMGCR-202ENST00000343975 CDC42SE1Q9NRR8 79 aa4.3□□□□□ -1.72
HMGCR-202ENST00000343975 SPANXA2-OT1Q8N9U9 137 aa4.29□□□□□ -1.72
HMGCR-202ENST00000343975 M0R2T5 61 aa4.28□□□□□ -1.72
HMGCR-202ENST00000343975 A6NN06 94 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms