RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 KRTAP26-1Q6PEX3 210 aa5.15□□□□□ -1.59
ATG4A-201ENST00000343524 TENM2Q9NT68 2774 aa5.14□□□□□ -1.59
ATG4A-201ENST00000343524 SPINK7P58062 85 aa5.14□□□□□ -1.59
ATG4A-201ENST00000343524 DEFB131BA0A096LNP1 70 aa5.13□□□□□ -1.59
ATG4A-201ENST00000343524 H3BNG1 76 aa5.13□□□□□ -1.59
ATG4A-201ENST00000343524 Q8NAQ8 132 aa5.13□□□□□ -1.59
ATG4A-201ENST00000343524 COL7A1Q02388 2944 aa5.12□□□□□ -1.59
ATG4A-201ENST00000343524 KRTAP10-2P60368 255 aa5.12□□□□□ -1.59
ATG4A-201ENST00000343524 REG3GQ6UW15 175 aa5.11□□□□□ -1.59
ATG4A-201ENST00000343524 HTN3P15516 51 aa5.11□□□□□ -1.59
ATG4A-201ENST00000343524 Q6ZR54 194 aa5.11□□□□□ -1.59
ATG4A-201ENST00000343524 MMP24-AS1A0A0U1RRL7 71 aa5.1□□□□□ -1.59
ATG4A-201ENST00000343524 RPL37AP61513 92 aaKnown RBP5.1□□□□□ -1.59
ATG4A-201ENST00000343524 DEFB135Q30KP9 77 aa5.1□□□□□ -1.59
ATG4A-201ENST00000343524 HRES1P13985 223 aa5.09□□□□□ -1.6
ATG4A-201ENST00000343524 PCOTHQ58A44 107 aa5.09□□□□□ -1.6
ATG4A-201ENST00000343524 LINC00472Q9H8W2 130 aa5.09□□□□□ -1.6
ATG4A-201ENST00000343524 IGKV2-24A0A0C4DH68 120 aa5.07□□□□□ -1.6
ATG4A-201ENST00000343524 H0Y9J4 135 aa5.07□□□□□ -1.6
ATG4A-201ENST00000343524 DNAH9Q9NYC9 4486 aa5.07□□□□□ -1.6
ATG4A-201ENST00000343524 DEFB4AO15263 64 aa5.07□□□□□ -1.6
ATG4A-201ENST00000343524 LINC01556Q5JQF7 62 aa5.07□□□□□ -1.6
ATG4A-201ENST00000343524 PRAC1Q96KF2 57 aa5.07□□□□□ -1.6
ATG4A-201ENST00000343524 RETNLBQ9BQ08 111 aa5.07□□□□□ -1.6
ATG4A-201ENST00000343524 A0A0A0MQY5 61 aa5.05□□□□□ -1.6
ATG4A-201ENST00000343524 RTL8CO15255 209 aa5.05□□□□□ -1.6
ATG4A-201ENST00000343524 SPRR1BP22528 89 aa5.05□□□□□ -1.6
ATG4A-201ENST00000343524 DNAH3Q8TD57 4116 aa5.04□□□□□ -1.6
ATG4A-201ENST00000343524 KRTAP10-3P60369 221 aa5.04□□□□□ -1.6
ATG4A-201ENST00000343524 CASC10Q5T4H9 136 aa5.04□□□□□ -1.6
ATG4A-201ENST00000343524 PRR26Q8N8Z3 221 aa5.03□□□□□ -1.6
ATG4A-201ENST00000343524 FAM168BA1KXE4 195 aa5.03□□□□□ -1.6
ATG4A-201ENST00000343524 ACYP2P14621 99 aa5.03□□□□□ -1.6
ATG4A-201ENST00000343524 SPATA8Q6RVD6 105 aa5.03□□□□□ -1.6
ATG4A-201ENST00000343524 KRTAP5-3Q6L8H2 238 aa5.02□□□□□ -1.61
ATG4A-201ENST00000343524 LYSTQ99698 3801 aa5.01□□□□□ -1.61
ATG4A-201ENST00000343524 A0A1B0GU69 56 aa5.01□□□□□ -1.61
ATG4A-201ENST00000343524 C8orf17Q9NRJ1 99 aa5.01□□□□□ -1.61
ATG4A-201ENST00000343524 A0A0G2JQZ4 141 aa5□□□□□ -1.61
ATG4A-201ENST00000343524 A0A1W2PNN7 141 aa5□□□□□ -1.61
ATG4A-201ENST00000343524 K7EIL1 84 aa5□□□□□ -1.61
ATG4A-201ENST00000343524 UQCR11O14957 56 aa4.99□□□□□ -1.61
ATG4A-201ENST00000343524 DNAH10OSP0CZ25 163 aa4.99□□□□□ -1.61
ATG4A-201ENST00000343524 KRTAP7-1Q8IUC3 87 aa4.99□□□□□ -1.61
ATG4A-201ENST00000343524 CDK2AP2O75956 126 aa4.98□□□□□ -1.61
ATG4A-201ENST00000343524 PRLHP81277 87 aa4.98□□□□□ -1.61
ATG4A-201ENST00000343524 MIR22HGQ0VDD5 57 aa4.98□□□□□ -1.61
ATG4A-201ENST00000343524 ADM2Q7Z4H4 148 aa4.98□□□□□ -1.61
ATG4A-201ENST00000343524 MRPL34Q9BQ48 92 aaKnown RBP4.98□□□□□ -1.61
ATG4A-201ENST00000343524 STAB2Q8WWQ8 2551 aa4.97□□□□□ -1.61
ATG4A-201ENST00000343524 A0A1B0GVX0 72 aa4.97□□□□□ -1.61
ATG4A-201ENST00000343524 DMAC1Q96GE9 116 aa4.95□□□□□ -1.62
ATG4A-201ENST00000343524 DNAH7Q8WXX0 4024 aa4.94□□□□□ -1.62
ATG4A-201ENST00000343524 CSAG1Q6PB30 78 aa4.93□□□□□ -1.62
ATG4A-201ENST00000343524 Q96NJ1 140 aa4.93□□□□□ -1.62
ATG4A-201ENST00000343524 KIAA1109Q2LD37 5005 aa4.92□□□□□ -1.62
ATG4A-201ENST00000343524 IGHV6-1A0A0B4J1U7 121 aa4.91□□□□□ -1.62
ATG4A-201ENST00000343524 ABCA13Q86UQ4 5058 aa4.88□□□□□ -1.63
ATG4A-201ENST00000343524 UBR4Q5T4S7 5183 aa4.88□□□□□ -1.63
ATG4A-201ENST00000343524 A0A096LNI7 61 aa4.87□□□□□ -1.63
ATG4A-201ENST00000343524 KRTAP10-11P60412 298 aa4.87□□□□□ -1.63
ATG4A-201ENST00000343524 FRAS1Q86XX4 4008 aa4.87□□□□□ -1.63
ATG4A-201ENST00000343524 HECTD4Q9Y4D8 3996 aa4.87□□□□□ -1.63
ATG4A-201ENST00000343524 CSMD3Q7Z407 3707 aa4.86□□□□□ -1.63
ATG4A-201ENST00000343524 KRTAP13-3Q3SY46 172 aa4.86□□□□□ -1.63
ATG4A-201ENST00000343524 ZNF706Q9Y5V0 76 aaPredicted RBP4.86□□□□□ -1.63
ATG4A-201ENST00000343524 C1orf134Q5TEV5 83 aa4.85□□□□□ -1.63
ATG4A-201ENST00000343524 ZNF861PO60384 105 aa4.85□□□□□ -1.63
ATG4A-201ENST00000343524 C14orf177Q52M58 125 aa4.85□□□□□ -1.63
ATG4A-201ENST00000343524 STARD9Q9P2P6 4700 aa4.84□□□□□ -1.63
ATG4A-201ENST00000343524 ALMS1Q8TCU4 4167 aa4.83□□□□□ -1.64
ATG4A-201ENST00000343524 ROMO1P60602 79 aa4.83□□□□□ -1.64
ATG4A-201ENST00000343524 LINC00483Q53H64 154 aa4.83□□□□□ -1.64
ATG4A-201ENST00000343524 HUWE1Q7Z6Z7 4374 aaKnown RBP4.83□□□□□ -1.64
ATG4A-201ENST00000343524 PLECQ15149 4684 aaKnown RBP4.82□□□□□ -1.64
ATG4A-201ENST00000343524 IGLV9-49A0A0B4J1Y8 123 aa4.82□□□□□ -1.64
ATG4A-201ENST00000343524 IGLV7-43P04211 117 aa4.82□□□□□ -1.64
ATG4A-201ENST00000343524 KRTAP25-1Q3LHN0 102 aa4.82□□□□□ -1.64
ATG4A-201ENST00000343524 KRTAP13-1Q8IUC0 172 aa4.81□□□□□ -1.64
ATG4A-201ENST00000343524 KRTAP3-1Q9BYR8 98 aa4.81□□□□□ -1.64
ATG4A-201ENST00000343524 HERC1Q15751 4861 aa4.8□□□□□ -1.64
ATG4A-201ENST00000343524 Q5W150 140 aa4.8□□□□□ -1.64
ATG4A-201ENST00000343524 DNAH10Q8IVF4 4471 aa4.79□□□□□ -1.64
ATG4A-201ENST00000343524 KRTAP9-8Q9BYQ0 159 aa4.79□□□□□ -1.64
ATG4A-201ENST00000343524 IGKV2-30P06310 120 aa4.78□□□□□ -1.64
ATG4A-201ENST00000343524 CHTF8P0CG12 524 aa4.76□□□□□ -1.65
ATG4A-201ENST00000343524 A8MUU9 505 aa4.75□□□□□ -1.65
ATG4A-201ENST00000343524 LY6G6CO95867 125 aa4.75□□□□□ -1.65
ATG4A-201ENST00000343524 KRTAP11-1Q8IUC1 163 aa4.75□□□□□ -1.65
ATG4A-201ENST00000343524 NOTCH2NLQ7Z3S9 236 aa4.74□□□□□ -1.65
ATG4A-201ENST00000343524 IGLV5-52A0A0A0MRZ9 124 aa4.72□□□□□ -1.65
ATG4A-201ENST00000343524 IGKV2D-30A0A075B6S6 120 aa4.7□□□□□ -1.66
ATG4A-201ENST00000343524 SPINK6Q6UWN8 80 aa4.7□□□□□ -1.66
ATG4A-201ENST00000343524 K7ERS5 55 aa4.7□□□□□ -1.66
ATG4A-201ENST00000343524 Q8N1X5 172 aa4.69□□□□□ -1.66
ATG4A-201ENST00000343524 LINC00304Q8N9R0 145 aa4.68□□□□□ -1.66
ATG4A-201ENST00000343524 DYNC1H1Q14204 4646 aaKnown RBP4.67□□□□□ -1.66
ATG4A-201ENST00000343524 KMT2AQ03164 3969 aa4.64□□□□□ -1.67
ATG4A-201ENST00000343524 SSBP3-AS1Q7Z2R9 100 aa4.64□□□□□ -1.67
ATG4A-201ENST00000343524 SPACA4Q8TDM5 124 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms