RNA–Protein interactions for RNA: ENST00000341421.7

TRAK1-202, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 4,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-202ENST00000341421 SMR3BP02814 79 aaPredicted RBP7.07□□□□□ -1.28
TRAK1-202ENST00000341421 Q8N1X5 172 aa7.06□□□□□ -1.28
TRAK1-202ENST00000341421 DMBT1Q9UGM3 2413 aaPredicted RBP7.06□□□□□ -1.28
TRAK1-202ENST00000341421 Q6ZR54 194 aa7.05□□□□□ -1.28
TRAK1-202ENST00000341421 CRIPTQ9P021 101 aa7.05□□□□□ -1.28
TRAK1-202ENST00000341421 SVEP1Q4LDE5 3571 aa7.05□□□□□ -1.28
TRAK1-202ENST00000341421 LINC00304Q8N9R0 145 aa7.04□□□□□ -1.28
TRAK1-202ENST00000341421 PANO1I0J062 215 aa7.04□□□□□ -1.28
TRAK1-202ENST00000341421 PDZD2O15018 2839 aa7.02□□□□□ -1.29
TRAK1-202ENST00000341421 KRTAP11-1Q8IUC1 163 aa7.02□□□□□ -1.29
TRAK1-202ENST00000341421 ASB16-AS1Q495Z4 193 aa7.02□□□□□ -1.29
TRAK1-202ENST00000341421 Q6ZRN7 208 aaPredicted RBP7.02□□□□□ -1.29
TRAK1-202ENST00000341421 KRTAP13-1Q8IUC0 172 aa6.99□□□□□ -1.29
TRAK1-202ENST00000341421 CSAG1Q6PB30 78 aa6.94□□□□□ -1.3
TRAK1-202ENST00000341421 TENM4Q6N022 2769 aa6.93□□□□□ -1.3
TRAK1-202ENST00000341421 A0A0D9SG42 100 aa6.93□□□□□ -1.3
TRAK1-202ENST00000341421 CUBNO60494 3623 aa6.93□□□□□ -1.3
TRAK1-202ENST00000341421 ADM2Q7Z4H4 148 aa6.91□□□□□ -1.3
TRAK1-202ENST00000341421 SPATA8Q6RVD6 105 aa6.91□□□□□ -1.3
TRAK1-202ENST00000341421 Q5W150 140 aa6.91□□□□□ -1.3
TRAK1-202ENST00000341421 DMAC1Q96GE9 116 aa6.91□□□□□ -1.3
TRAK1-202ENST00000341421 COX6B2Q6YFQ2 88 aa6.88□□□□□ -1.31
TRAK1-202ENST00000341421 TENM3Q9P273 2699 aa6.88□□□□□ -1.31
TRAK1-202ENST00000341421 TENM1Q9UKZ4 2725 aa6.87□□□□□ -1.31
TRAK1-202ENST00000341421 LUZP6Q538Z0 58 aa6.87□□□□□ -1.31
TRAK1-202ENST00000341421 A0A087X002 238 aa6.85□□□□□ -1.31
TRAK1-202ENST00000341421 VWFP04275 2813 aa6.85□□□□□ -1.31
TRAK1-202ENST00000341421 KRTAP10-2P60368 255 aa6.84□□□□□ -1.31
TRAK1-202ENST00000341421 KRTAP10-1P60331 282 aa6.82□□□□□ -1.32
TRAK1-202ENST00000341421 NOTCH2NLQ7Z3S9 236 aa6.82□□□□□ -1.32
TRAK1-202ENST00000341421 A0A1B0GU33 70 aa6.81□□□□□ -1.32
TRAK1-202ENST00000341421 OTOGQ6ZRI0 2925 aa6.79□□□□□ -1.32
TRAK1-202ENST00000341421 J3QL48 77 aa6.78□□□□□ -1.32
TRAK1-202ENST00000341421 CSMD2Q7Z408 3487 aa6.78□□□□□ -1.32
TRAK1-202ENST00000341421 ANK3Q12955 4377 aaKnown RBP6.77□□□□□ -1.33
TRAK1-202ENST00000341421 A0A0A0MQY5 61 aa6.74□□□□□ -1.33
TRAK1-202ENST00000341421 ZFHX3Q15911 3703 aa6.7□□□□□ -1.34
TRAK1-202ENST00000341421 RPS29P62273 56 aaKnown RBP6.7□□□□□ -1.34
TRAK1-202ENST00000341421 KRTAP13-2Q52LG2 175 aa6.7□□□□□ -1.34
TRAK1-202ENST00000341421 NBPF19A0A087WUL8 3843 aa6.7□□□□□ -1.34
TRAK1-202ENST00000341421 KRTAP25-1Q3LHN0 102 aa6.65□□□□□ -1.35
TRAK1-202ENST00000341421 CAMK2N1Q7Z7J9 78 aa6.64□□□□□ -1.35
TRAK1-202ENST00000341421 VPS13CQ709C8 3753 aa6.63□□□□□ -1.35
TRAK1-202ENST00000341421 Q6ZSA8 131 aa6.62□□□□□ -1.35
TRAK1-202ENST00000341421 ROMO1P60602 79 aa6.59□□□□□ -1.35
TRAK1-202ENST00000341421 PKD1L1Q8TDX9 2849 aa6.57□□□□□ -1.36
TRAK1-202ENST00000341421 KRTAP13-3Q3SY46 172 aa6.56□□□□□ -1.36
TRAK1-202ENST00000341421 FBN1P35555 2871 aaKnown RBP6.55□□□□□ -1.36
TRAK1-202ENST00000341421 H1FX-AS1Q4G0G2 97 aa6.54□□□□□ -1.36
TRAK1-202ENST00000341421 KRTAP1-4P0C5Y4 121 aa6.53□□□□□ -1.36
TRAK1-202ENST00000341421 S4R3F8 94 aa6.53□□□□□ -1.36
TRAK1-202ENST00000341421 KRTAP16-1A8MUX0 517 aa6.52□□□□□ -1.37
TRAK1-202ENST00000341421 RPL37P61927 97 aaKnown RBP6.5□□□□□ -1.37
TRAK1-202ENST00000341421 TRRAPQ9Y4A5 3859 aa6.5□□□□□ -1.37
TRAK1-202ENST00000341421 KRTAP21-3Q3LHN1 58 aa6.49□□□□□ -1.37
TRAK1-202ENST00000341421 A8MUU9 505 aa6.48□□□□□ -1.37
TRAK1-202ENST00000341421 ZNF469Q96JG9 3925 aaPredicted RBP6.46□□□□□ -1.38
TRAK1-202ENST00000341421 R4GN34 69 aa6.45□□□□□ -1.38
TRAK1-202ENST00000341421 C20orf166-AS1Q96NR2 134 aa6.44□□□□□ -1.38
TRAK1-202ENST00000341421 AKAP9Q99996 3911 aa6.44□□□□□ -1.38
TRAK1-202ENST00000341421 NDUFAF8A1L188 74 aa6.44□□□□□ -1.38
TRAK1-202ENST00000341421 Q5VSD8 79 aa6.44□□□□□ -1.38
TRAK1-202ENST00000341421 H0YAA0 97 aa6.41□□□□□ -1.38
TRAK1-202ENST00000341421 M0R2T5 61 aa6.41□□□□□ -1.38
TRAK1-202ENST00000341421 SRRM2Q9UQ35 2752 aaKnown RBP6.41□□□□□ -1.38
TRAK1-202ENST00000341421 TGP01266 2768 aa6.39□□□□□ -1.39
TRAK1-202ENST00000341421 TENM2Q9NT68 2774 aa6.35□□□□□ -1.39
TRAK1-202ENST00000341421 M0QZ58 72 aa6.35□□□□□ -1.39
TRAK1-202ENST00000341421 SEC61BP60468 96 aaKnown RBP6.26□□□□□ -1.41
TRAK1-202ENST00000341421 HUWE1Q7Z6Z7 4374 aaKnown RBP6.25□□□□□ -1.41
TRAK1-202ENST00000341421 MEGF8Q7Z7M0 2845 aa6.19□□□□□ -1.42
TRAK1-202ENST00000341421 FBN3Q75N90 2809 aa6.16□□□□□ -1.42
TRAK1-202ENST00000341421 A0A1B0GVY2 172 aa6.15□□□□□ -1.42
TRAK1-202ENST00000341421 PLAC4Q8WY50 150 aa6.15□□□□□ -1.43
TRAK1-202ENST00000341421 P0C880 135 aa6.13□□□□□ -1.43
TRAK1-202ENST00000341421 XP32Q5T750 250 aa6.13□□□□□ -1.43
TRAK1-202ENST00000341421 C10orf95Q9H7T3 257 aa6.12□□□□□ -1.43
TRAK1-202ENST00000341421 KRTAP10-8P60410 259 aa6.06□□□□□ -1.44
TRAK1-202ENST00000341421 COL7A1Q02388 2944 aa6.05□□□□□ -1.44
TRAK1-202ENST00000341421 DNAH9Q9NYC9 4486 aa6.04□□□□□ -1.44
TRAK1-202ENST00000341421 TPRXLQ17RH7 258 aa6.02□□□□□ -1.45
TRAK1-202ENST00000341421 KRTAP3-1Q9BYR8 98 aa6.02□□□□□ -1.45
TRAK1-202ENST00000341421 ALMS1Q8TCU4 4167 aa5.97□□□□□ -1.45
TRAK1-202ENST00000341421 PLECQ15149 4684 aaKnown RBP5.92□□□□□ -1.46
TRAK1-202ENST00000341421 KRTAP15-1Q3LI76 137 aa5.89□□□□□ -1.47
TRAK1-202ENST00000341421 DNAH1Q9P2D7 4330 aa5.89□□□□□ -1.47
TRAK1-202ENST00000341421 DNAH10Q8IVF4 4471 aa5.88□□□□□ -1.47
TRAK1-202ENST00000341421 VPS13DQ5THJ4 4388 aa5.88□□□□□ -1.47
TRAK1-202ENST00000341421 CSMD3Q7Z407 3707 aa5.88□□□□□ -1.47
TRAK1-202ENST00000341421 KRTAP10-4P60372 401 aaPredicted RBP5.88□□□□□ -1.47
TRAK1-202ENST00000341421 DNAH3Q8TD57 4116 aa5.86□□□□□ -1.47
TRAK1-202ENST00000341421 KRTAP10-6P60371 365 aaPredicted RBP5.86□□□□□ -1.47
TRAK1-202ENST00000341421 KRTAP13-4Q3LI77 160 aa5.86□□□□□ -1.47
TRAK1-202ENST00000341421 TNP1P09430 55 aa5.84□□□□□ -1.48
TRAK1-202ENST00000341421 KRTAP12-2P59991 146 aa5.84□□□□□ -1.48
TRAK1-202ENST00000341421 DNAH17Q9UFH2 4485 aa5.84□□□□□ -1.48
TRAK1-202ENST00000341421 KRTAP12-1P59990 96 aa5.78□□□□□ -1.48
TRAK1-202ENST00000341421 ANK2Q01484 3957 aa5.76□□□□□ -1.49
TRAK1-202ENST00000341421 STARD9Q9P2P6 4700 aa5.75□□□□□ -1.49
TRAK1-202ENST00000341421 KRTAP3-2Q9BYR7 98 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms