RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 A0A0D9SG42 100 aa4.64□□□□□ -1.67
ATP2B4-201ENST00000341360 ASB16-AS1Q495Z4 193 aa4.63□□□□□ -1.67
ATP2B4-201ENST00000341360 KRTAP10-1P60331 282 aa4.63□□□□□ -1.67
ATP2B4-201ENST00000341360 HRNRQ86YZ3 2850 aaPredicted RBP4.63□□□□□ -1.67
ATP2B4-201ENST00000341360 ITPR2Q14571 2701 aa4.62□□□□□ -1.67
ATP2B4-201ENST00000341360 KRTAP4-16G5E9R7 235 aaPredicted RBP4.62□□□□□ -1.67
ATP2B4-201ENST00000341360 Q8N9P0 234 aaPredicted RBP4.62□□□□□ -1.67
ATP2B4-201ENST00000341360 TACC2O95359 2948 aa4.61□□□□□ -1.67
ATP2B4-201ENST00000341360 CSMD1Q96PZ7 3565 aa4.61□□□□□ -1.67
ATP2B4-201ENST00000341360 COL12A1Q99715 3063 aa4.6□□□□□ -1.67
ATP2B4-201ENST00000341360 ZFHX3Q15911 3703 aa4.6□□□□□ -1.67
ATP2B4-201ENST00000341360 R4GN34 69 aa4.6□□□□□ -1.67
ATP2B4-201ENST00000341360 Q5VV11 94 aa4.59□□□□□ -1.67
ATP2B4-201ENST00000341360 HIVEP1P15822 2718 aa4.59□□□□□ -1.68
ATP2B4-201ENST00000341360 ASH1LQ9NR48 2969 aaKnown RBP4.59□□□□□ -1.68
ATP2B4-201ENST00000341360 KRTAP10-2P60368 255 aa4.57□□□□□ -1.68
ATP2B4-201ENST00000341360 KRTAP29-1A8MX34 341 aaPredicted RBP4.57□□□□□ -1.68
ATP2B4-201ENST00000341360 CSMD2Q7Z408 3487 aa4.56□□□□□ -1.68
ATP2B4-201ENST00000341360 KMT2BQ9UMN6 2715 aaPredicted RBP4.55□□□□□ -1.68
ATP2B4-201ENST00000341360 RPL37P61927 97 aaKnown RBP4.53□□□□□ -1.68
ATP2B4-201ENST00000341360 Q6ZRN7 208 aaPredicted RBP4.52□□□□□ -1.69
ATP2B4-201ENST00000341360 CRYBG3Q68DQ2 2970 aa4.51□□□□□ -1.69
ATP2B4-201ENST00000341360 CELSR1Q9NYQ6 3014 aa4.51□□□□□ -1.69
ATP2B4-201ENST00000341360 CELSR2Q9HCU4 2923 aa4.49□□□□□ -1.69
ATP2B4-201ENST00000341360 NBPF19A0A087WUL8 3843 aa4.48□□□□□ -1.69
ATP2B4-201ENST00000341360 PLAC4Q8WY50 150 aa4.47□□□□□ -1.69
ATP2B4-201ENST00000341360 H1FX-AS1Q4G0G2 97 aa4.47□□□□□ -1.69
ATP2B4-201ENST00000341360 PANO1I0J062 215 aa4.46□□□□□ -1.7
ATP2B4-201ENST00000341360 FBN2P35556 2912 aa4.46□□□□□ -1.7
ATP2B4-201ENST00000341360 M0QZ58 72 aa4.46□□□□□ -1.7
ATP2B4-201ENST00000341360 A0A087X002 238 aa4.45□□□□□ -1.7
ATP2B4-201ENST00000341360 KRTAP7-1Q8IUC3 87 aa4.45□□□□□ -1.7
ATP2B4-201ENST00000341360 PRAC1Q96KF2 57 aa4.45□□□□□ -1.7
ATP2B4-201ENST00000341360 ROMO1P60602 79 aa4.44□□□□□ -1.7
ATP2B4-201ENST00000341360 KRTAP13-1Q8IUC0 172 aa4.43□□□□□ -1.7
ATP2B4-201ENST00000341360 ZNF469Q96JG9 3925 aaPredicted RBP4.42□□□□□ -1.7
ATP2B4-201ENST00000341360 A6NN06 94 aa4.42□□□□□ -1.7
ATP2B4-201ENST00000341360 NBEAL2Q6ZNJ1 2754 aa4.39□□□□□ -1.71
ATP2B4-201ENST00000341360 CUBNO60494 3623 aa4.38□□□□□ -1.71
ATP2B4-201ENST00000341360 ADM2Q7Z4H4 148 aa4.38□□□□□ -1.71
ATP2B4-201ENST00000341360 ZANQ9Y493 2812 aa4.37□□□□□ -1.71
ATP2B4-201ENST00000341360 TENM3Q9P273 2699 aa4.37□□□□□ -1.71
ATP2B4-201ENST00000341360 NOTCH2NLQ7Z3S9 236 aa4.36□□□□□ -1.71
ATP2B4-201ENST00000341360 SPATA8Q6RVD6 105 aa4.35□□□□□ -1.71
ATP2B4-201ENST00000341360 KRTAP13-2Q52LG2 175 aa4.35□□□□□ -1.71
ATP2B4-201ENST00000341360 AKAP9Q99996 3911 aa4.35□□□□□ -1.71
ATP2B4-201ENST00000341360 APCP25054 2843 aa4.35□□□□□ -1.71
ATP2B4-201ENST00000341360 NIPBLQ6KC79 2804 aaeCLIP4.34□□□□□ -1.71
ATP2B4-201ENST00000341360 A8MUU9 505 aa4.33□□□□□ -1.72
ATP2B4-201ENST00000341360 MXRA5Q9NR99 2828 aa4.33□□□□□ -1.72
ATP2B4-201ENST00000341360 C20orf166-AS1Q96NR2 134 aa4.32□□□□□ -1.72
ATP2B4-201ENST00000341360 NDUFAF8A1L188 74 aa4.31□□□□□ -1.72
ATP2B4-201ENST00000341360 KRTAP11-1Q8IUC1 163 aa4.31□□□□□ -1.72
ATP2B4-201ENST00000341360 TENM2Q9NT68 2774 aa4.31□□□□□ -1.72
ATP2B4-201ENST00000341360 PDZD2O15018 2839 aa4.3□□□□□ -1.72
ATP2B4-201ENST00000341360 A8MU10 97 aa4.3□□□□□ -1.72
ATP2B4-201ENST00000341360 ANK3Q12955 4377 aaKnown RBP4.27□□□□□ -1.73
ATP2B4-201ENST00000341360 TENM1Q9UKZ4 2725 aa4.26□□□□□ -1.73
ATP2B4-201ENST00000341360 TPRXLQ17RH7 258 aa4.23□□□□□ -1.73
ATP2B4-201ENST00000341360 NF1P21359 2839 aa4.23□□□□□ -1.73
ATP2B4-201ENST00000341360 TNP1P09430 55 aa4.22□□□□□ -1.73
ATP2B4-201ENST00000341360 OTOGQ6ZRI0 2925 aa4.2□□□□□ -1.74
ATP2B4-201ENST00000341360 PP632Q6XCG6 107 aa4.2□□□□□ -1.74
ATP2B4-201ENST00000341360 KRTAP1-4P0C5Y4 121 aa4.19□□□□□ -1.74
ATP2B4-201ENST00000341360 PKD1L1Q8TDX9 2849 aa4.18□□□□□ -1.74
ATP2B4-201ENST00000341360 XP32Q5T750 250 aa4.16□□□□□ -1.74
ATP2B4-201ENST00000341360 KRTAP25-1Q3LHN0 102 aa4.16□□□□□ -1.74
ATP2B4-201ENST00000341360 KRTAP13-3Q3SY46 172 aa4.15□□□□□ -1.75
ATP2B4-201ENST00000341360 TRRAPQ9Y4A5 3859 aa4.09□□□□□ -1.75
ATP2B4-201ENST00000341360 PRO2289Q9P1D8 64 aa4.09□□□□□ -1.75
ATP2B4-201ENST00000341360 VWFP04275 2813 aa4.09□□□□□ -1.76
ATP2B4-201ENST00000341360 CMYA5Q8N3K9 4069 aa4.04□□□□□ -1.76
ATP2B4-201ENST00000341360 KRTAP10-8P60410 259 aa4.03□□□□□ -1.76
ATP2B4-201ENST00000341360 FBN1P35555 2871 aaKnown RBP4.02□□□□□ -1.77
ATP2B4-201ENST00000341360 A0A1B0GVY2 172 aa4.02□□□□□ -1.77
ATP2B4-201ENST00000341360 ANK2Q01484 3957 aa4.02□□□□□ -1.77
ATP2B4-201ENST00000341360 SRRM2Q9UQ35 2752 aaKnown RBP4.02□□□□□ -1.77
ATP2B4-201ENST00000341360 FBN3Q75N90 2809 aa3.99□□□□□ -1.77
ATP2B4-201ENST00000341360 KRTAP23-1A1A580 65 aa3.98□□□□□ -1.77
ATP2B4-201ENST00000341360 H0YAA0 97 aa3.98□□□□□ -1.77
ATP2B4-201ENST00000341360 KRTAP10-10P60014 251 aa3.98□□□□□ -1.77
ATP2B4-201ENST00000341360 DNAH3Q8TD57 4116 aa3.94□□□□□ -1.78
ATP2B4-201ENST00000341360 TGP01266 2768 aa3.93□□□□□ -1.78
ATP2B4-201ENST00000341360 C10orf95Q9H7T3 257 aa3.92□□□□□ -1.78
ATP2B4-201ENST00000341360 P0C880 135 aa3.9□□□□□ -1.79
ATP2B4-201ENST00000341360 HUWE1Q7Z6Z7 4374 aaKnown RBP3.85□□□□□ -1.79
ATP2B4-201ENST00000341360 LYSTQ99698 3801 aa3.84□□□□□ -1.79
ATP2B4-201ENST00000341360 COL7A1Q02388 2944 aa3.79□□□□□ -1.8
ATP2B4-201ENST00000341360 KRTAP3-1Q9BYR8 98 aa3.78□□□□□ -1.8
ATP2B4-201ENST00000341360 DNAH1Q9P2D7 4330 aa3.78□□□□□ -1.8
ATP2B4-201ENST00000341360 DNAH7Q8WXX0 4024 aa3.78□□□□□ -1.8
ATP2B4-201ENST00000341360 DNAH9Q9NYC9 4486 aa3.78□□□□□ -1.8
ATP2B4-201ENST00000341360 CSMD3Q7Z407 3707 aa3.77□□□□□ -1.81
ATP2B4-201ENST00000341360 KRTAP13-4Q3LI77 160 aa3.76□□□□□ -1.81
ATP2B4-201ENST00000341360 DNAH10Q8IVF4 4471 aa3.73□□□□□ -1.81
ATP2B4-201ENST00000341360 PRKDCP78527 4128 aaKnown RBP3.73□□□□□ -1.81
ATP2B4-201ENST00000341360 DNHD1Q96M86 4753 aa3.73□□□□□ -1.81
ATP2B4-201ENST00000341360 DYNC2H1Q8NCM8 4307 aaKnown RBP3.73□□□□□ -1.81
ATP2B4-201ENST00000341360 PLECQ15149 4684 aaKnown RBP3.7□□□□□ -1.82
ATP2B4-201ENST00000341360 MEGF8Q7Z7M0 2845 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms