RNA–Protein interactions for RNA: ENST00000341162.8

FCF1-201, Transcript of FCF1, rRNA-processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FCF1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-201ENST00000341162 SPAG11AQ6PDA7 123 aa4.19□□□□□ -1.74
FCF1-201ENST00000341162 CIRBP-AS1Q8TBR5 109 aa4.19□□□□□ -1.74
FCF1-201ENST00000341162 IGLV9-49A0A0B4J1Y8 123 aa4.18□□□□□ -1.74
FCF1-201ENST00000341162 KRTAP13-3Q3SY46 172 aa4.18□□□□□ -1.74
FCF1-201ENST00000341162 COL7A1Q02388 2944 aa4.17□□□□□ -1.74
FCF1-201ENST00000341162 DNAH5Q8TE73 4624 aa4.17□□□□□ -1.74
FCF1-201ENST00000341162 WFDC13Q8IUB5 93 aa4.17□□□□□ -1.74
FCF1-201ENST00000341162 Q8N9P0 234 aaPredicted RBP4.17□□□□□ -1.74
FCF1-201ENST00000341162 C1orf64Q8NEQ6 169 aa4.16□□□□□ -1.74
FCF1-201ENST00000341162 SPINK1P00995 79 aa4.16□□□□□ -1.74
FCF1-201ENST00000341162 KRTAP1-4P0C5Y4 121 aa4.15□□□□□ -1.74
FCF1-201ENST00000341162 FP248Q71RG6 208 aaPredicted RBP4.15□□□□□ -1.74
FCF1-201ENST00000341162 KRTAP10-2P60368 255 aa4.15□□□□□ -1.75
FCF1-201ENST00000341162 KRTAP10-1P60331 282 aa4.14□□□□□ -1.75
FCF1-201ENST00000341162 PRR26Q8N8Z3 221 aa4.14□□□□□ -1.75
FCF1-201ENST00000341162 LINC00208Q96KT6 92 aa4.14□□□□□ -1.75
FCF1-201ENST00000341162 DYNC1H1Q14204 4646 aaKnown RBP4.13□□□□□ -1.75
FCF1-201ENST00000341162 A0A1B0GVY2 172 aa4.13□□□□□ -1.75
FCF1-201ENST00000341162 KMT2AQ03164 3969 aa4.13□□□□□ -1.75
FCF1-201ENST00000341162 A0A0G2JQZ4 141 aa4.13□□□□□ -1.75
FCF1-201ENST00000341162 KRTAP13-2Q52LG2 175 aa4.12□□□□□ -1.75
FCF1-201ENST00000341162 RYR2Q92736 4967 aa4.11□□□□□ -1.75
FCF1-201ENST00000341162 KRTAP16-1A8MUX0 517 aa4.11□□□□□ -1.75
FCF1-201ENST00000341162 DEFB116Q30KQ4 102 aa4.1□□□□□ -1.75
FCF1-201ENST00000341162 IGHV6-1A0A0B4J1U7 121 aa4.1□□□□□ -1.75
FCF1-201ENST00000341162 FBN3Q75N90 2809 aa4.1□□□□□ -1.75
FCF1-201ENST00000341162 LINC00313P59037 77 aa4.1□□□□□ -1.75
FCF1-201ENST00000341162 STAB2Q8WWQ8 2551 aa4.09□□□□□ -1.75
FCF1-201ENST00000341162 FAT3Q8TDW7 4589 aa4.09□□□□□ -1.75
FCF1-201ENST00000341162 HYDINQ4G0P3 5121 aa4.09□□□□□ -1.75
FCF1-201ENST00000341162 MEGF8Q7Z7M0 2845 aa4.09□□□□□ -1.75
FCF1-201ENST00000341162 PRO0628Q9UI54 55 aa4.09□□□□□ -1.75
FCF1-201ENST00000341162 C4orf26Q17RF5 130 aa4.07□□□□□ -1.76
FCF1-201ENST00000341162 IGKV2-30P06310 120 aa4.07□□□□□ -1.76
FCF1-201ENST00000341162 A0A087X002 238 aa4.06□□□□□ -1.76
FCF1-201ENST00000341162 DMAC1Q96GE9 116 aa4.06□□□□□ -1.76
FCF1-201ENST00000341162 A8MUN3 132 aa4.06□□□□□ -1.76
FCF1-201ENST00000341162 KRTAP10-4P60372 401 aaPredicted RBP4.05□□□□□ -1.76
FCF1-201ENST00000341162 LINC01558Q9Y6Z2 57 aa4.05□□□□□ -1.76
FCF1-201ENST00000341162 COA5Q86WW8 74 aa4.05□□□□□ -1.76
FCF1-201ENST00000341162 TYMSOSQ8TAI1 123 aa4.05□□□□□ -1.76
FCF1-201ENST00000341162 APOBP04114 4563 aaKnown RBP4.05□□□□□ -1.76
FCF1-201ENST00000341162 Q75L30 129 aa4.04□□□□□ -1.76
FCF1-201ENST00000341162 HRCT1Q6UXD1 115 aa4.04□□□□□ -1.76
FCF1-201ENST00000341162 LINC00304Q8N9R0 145 aa4.04□□□□□ -1.76
FCF1-201ENST00000341162 ACYP2P14621 99 aa4.04□□□□□ -1.76
FCF1-201ENST00000341162 Q5W150 140 aa4.03□□□□□ -1.76
FCF1-201ENST00000341162 ANAPC11Q9NYG5 84 aa4.02□□□□□ -1.77
FCF1-201ENST00000341162 NDUFS5O43920 106 aa4.02□□□□□ -1.77
FCF1-201ENST00000341162 C20orf166-AS1Q96NR2 134 aa4.02□□□□□ -1.77
FCF1-201ENST00000341162 H3BS24 57 aa4.01□□□□□ -1.77
FCF1-201ENST00000341162 NOTCH2NLQ7Z3S9 236 aa4.01□□□□□ -1.77
FCF1-201ENST00000341162 HSPG2P98160 4391 aa4.01□□□□□ -1.77
FCF1-201ENST00000341162 A8MUU9 505 aa4.01□□□□□ -1.77
FCF1-201ENST00000341162 PRR4Q16378 134 aa4.01□□□□□ -1.77
FCF1-201ENST00000341162 Q8N1X5 172 aa4.01□□□□□ -1.77
FCF1-201ENST00000341162 LCE2BO14633 110 aa4□□□□□ -1.77
FCF1-201ENST00000341162 SEC61BP60468 96 aaKnown RBP3.99□□□□□ -1.77
FCF1-201ENST00000341162 HRES1P13985 223 aa3.99□□□□□ -1.77
FCF1-201ENST00000341162 IGKV2D-30A0A075B6S6 120 aa3.98□□□□□ -1.77
FCF1-201ENST00000341162 TENM2Q9NT68 2774 aa3.98□□□□□ -1.77
FCF1-201ENST00000341162 Q5VV11 94 aa3.97□□□□□ -1.77
FCF1-201ENST00000341162 COX6B2Q6YFQ2 88 aa3.97□□□□□ -1.77
FCF1-201ENST00000341162 Q5VSD8 79 aa3.97□□□□□ -1.77
FCF1-201ENST00000341162 TNXBP22105 4242 aa3.97□□□□□ -1.77
FCF1-201ENST00000341162 C7orf65Q6ZTY9 151 aa3.97□□□□□ -1.77
FCF1-201ENST00000341162 PRR15LQ9BU68 103 aa3.96□□□□□ -1.78
FCF1-201ENST00000341162 DMBT1Q9UGM3 2413 aaPredicted RBP3.96□□□□□ -1.78
FCF1-201ENST00000341162 LRP1BQ9NZR2 4599 aa3.95□□□□□ -1.78
FCF1-201ENST00000341162 SPTSSBQ8NFR3 76 aa3.94□□□□□ -1.78
FCF1-201ENST00000341162 MPLKIPQ8TAP9 179 aa3.94□□□□□ -1.78
FCF1-201ENST00000341162 FAT1Q14517 4588 aa3.94□□□□□ -1.78
FCF1-201ENST00000341162 PCOTHQ58A44 107 aa3.94□□□□□ -1.78
FCF1-201ENST00000341162 CDC42SE1Q9NRR8 79 aa3.93□□□□□ -1.78
FCF1-201ENST00000341162 LCE2CQ5TA81 110 aa3.92□□□□□ -1.78
FCF1-201ENST00000341162 KRTAP10-8P60410 259 aa3.92□□□□□ -1.78
FCF1-201ENST00000341162 ATP11AUNQ6ZP68 121 aa3.91□□□□□ -1.78
FCF1-201ENST00000341162 RYR3Q15413 4870 aa3.91□□□□□ -1.78
FCF1-201ENST00000341162 BRK1Q8WUW1 75 aa3.89□□□□□ -1.79
FCF1-201ENST00000341162 KMT2CQ8NEZ4 4911 aaKnown RBP3.88□□□□□ -1.79
FCF1-201ENST00000341162 CHKB-CPT1BH3BT56 60 aa3.88□□□□□ -1.79
FCF1-201ENST00000341162 RBM12B-AS1Q9P1G2 102 aa3.85□□□□□ -1.79
FCF1-201ENST00000341162 PSPHP1O15172 72 aa3.85□□□□□ -1.79
FCF1-201ENST00000341162 SPATA8Q6RVD6 105 aa3.84□□□□□ -1.8
FCF1-201ENST00000341162 FLG2Q5D862 2391 aaPredicted RBP3.83□□□□□ -1.8
FCF1-201ENST00000341162 SMR3BP02814 79 aaPredicted RBP3.83□□□□□ -1.8
FCF1-201ENST00000341162 RPL37P61927 97 aaKnown RBP3.83□□□□□ -1.8
FCF1-201ENST00000341162 A6NED7 52 aa3.82□□□□□ -1.8
FCF1-201ENST00000341162 A0A1B0GU69 56 aa3.81□□□□□ -1.8
FCF1-201ENST00000341162 RETNLBQ9BQ08 111 aa3.81□□□□□ -1.8
FCF1-201ENST00000341162 SRRM2Q9UQ35 2752 aaKnown RBP3.81□□□□□ -1.8
FCF1-201ENST00000341162 LCE2AQ5TA79 106 aaPredicted RBP3.81□□□□□ -1.8
FCF1-201ENST00000341162 LCA10Q71F78 164 aa3.8□□□□□ -1.8
FCF1-201ENST00000341162 UQCR11O14957 56 aa3.79□□□□□ -1.8
FCF1-201ENST00000341162 XP32Q5T750 250 aa3.79□□□□□ -1.8
FCF1-201ENST00000341162 RYR1P21817 5038 aa3.79□□□□□ -1.8
FCF1-201ENST00000341162 A6NN06 94 aa3.79□□□□□ -1.8
FCF1-201ENST00000341162 M0R2T5 61 aa3.79□□□□□ -1.8
FCF1-201ENST00000341162 SEC61GP60059 68 aa3.77□□□□□ -1.81
FCF1-201ENST00000341162 TPRXLQ17RH7 258 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 153.9 ms