RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 LINC00472Q9H8W2 130 aa10.05□□□□□ -0.8
CLDN4-201ENST00000340958 SPINK1P00995 79 aa10.05□□□□□ -0.8
CLDN4-201ENST00000340958 IGKV4-1P06312 121 aa10.04□□□□□ -0.8
CLDN4-201ENST00000340958 SPAG11AQ6PDA7 123 aa10.04□□□□□ -0.8
CLDN4-201ENST00000340958 C20orf197Q8N268 126 aa10.04□□□□□ -0.8
CLDN4-201ENST00000340958 HERC1Q15751 4861 aa10.01□□□□□ -0.81
CLDN4-201ENST00000340958 KRTAP29-1A8MX34 341 aaPredicted RBP10.01□□□□□ -0.81
CLDN4-201ENST00000340958 DSCR10P59022 87 aa10.01□□□□□ -0.81
CLDN4-201ENST00000340958 KLKP1Q107X0 134 aa10□□□□□ -0.81
CLDN4-201ENST00000340958 K7EQZ3 153 aa9.99□□□□□ -0.81
CLDN4-201ENST00000340958 NDUFB1O75438 58 aa9.99□□□□□ -0.81
CLDN4-201ENST00000340958 Q96NJ1 140 aa9.99□□□□□ -0.81
CLDN4-201ENST00000340958 J3QL48 77 aa9.98□□□□□ -0.81
CLDN4-201ENST00000340958 OXTP01178 125 aa9.98□□□□□ -0.81
CLDN4-201ENST00000340958 Q5XG85 94 aa9.98□□□□□ -0.81
CLDN4-201ENST00000340958 A8MWP4 228 aa9.97□□□□□ -0.81
CLDN4-201ENST00000340958 H7BZZ5 65 aa9.97□□□□□ -0.81
CLDN4-201ENST00000340958 ASB16-AS1Q495Z4 193 aa9.96□□□□□ -0.81
CLDN4-201ENST00000340958 RPS29P62273 56 aaKnown RBP9.93□□□□□ -0.82
CLDN4-201ENST00000340958 FAM236DA0A1B0GTK5 79 aa9.93□□□□□ -0.82
CLDN4-201ENST00000340958 FAM236CP0DP71 79 aa9.93□□□□□ -0.82
CLDN4-201ENST00000340958 PRR15Q8IV56 129 aa9.93□□□□□ -0.82
CLDN4-201ENST00000340958 NDUFC1O43677 76 aa9.92□□□□□ -0.82
CLDN4-201ENST00000340958 C1orf195Q5TG92 126 aa9.91□□□□□ -0.82
CLDN4-201ENST00000340958 KRTAP10-8P60410 259 aa9.91□□□□□ -0.82
CLDN4-201ENST00000340958 SERP1Q9Y6X1 66 aa9.91□□□□□ -0.82
CLDN4-201ENST00000340958 IGHV6-1A0A0B4J1U7 121 aa9.9□□□□□ -0.82
CLDN4-201ENST00000340958 SNURFQ9Y675 71 aa9.9□□□□□ -0.82
CLDN4-201ENST00000340958 TNXBP22105 4242 aa9.89□□□□□ -0.83
CLDN4-201ENST00000340958 MT1HL1P0DM35 61 aa9.89□□□□□ -0.83
CLDN4-201ENST00000340958 A0A1B0GVX0 72 aa9.88□□□□□ -0.83
CLDN4-201ENST00000340958 HCG22E2RYF7 251 aa9.88□□□□□ -0.83
CLDN4-201ENST00000340958 ATP5EP56381 51 aaPredicted RBP9.88□□□□□ -0.83
CLDN4-201ENST00000340958 WFDC13Q8IUB5 93 aa9.86□□□□□ -0.83
CLDN4-201ENST00000340958 OCR1Q9BZK8 76 aa9.85□□□□□ -0.83
CLDN4-201ENST00000340958 CASC2Q6XLA1 102 aa9.83□□□□□ -0.84
CLDN4-201ENST00000340958 TMEM254Q8TBM7 123 aa9.83□□□□□ -0.84
CLDN4-201ENST00000340958 C8orf17Q9NRJ1 99 aa9.81□□□□□ -0.84
CLDN4-201ENST00000340958 A0A0U1RQV1 116 aa9.79□□□□□ -0.84
CLDN4-201ENST00000340958 MMP24-AS1A0A0U1RRL7 71 aa9.79□□□□□ -0.84
CLDN4-201ENST00000340958 hDV103S1A0JD37 113 aa9.79□□□□□ -0.84
CLDN4-201ENST00000340958 RETNLBQ9BQ08 111 aa9.79□□□□□ -0.84
CLDN4-201ENST00000340958 C4orf26Q17RF5 130 aa9.78□□□□□ -0.84
CLDN4-201ENST00000340958 SMIM26A0A096LP01 95 aa9.77□□□□□ -0.85
CLDN4-201ENST00000340958 C8orf87E5RJ46 101 aa9.77□□□□□ -0.85
CLDN4-201ENST00000340958 LINC00313P59037 77 aa9.77□□□□□ -0.85
CLDN4-201ENST00000340958 NOTCH2NLQ7Z3S9 236 aa9.74□□□□□ -0.85
CLDN4-201ENST00000340958 NDUFS5O43920 106 aa9.71□□□□□ -0.85
CLDN4-201ENST00000340958 MRPL34Q9BQ48 92 aaKnown RBP9.7□□□□□ -0.86
CLDN4-201ENST00000340958 HMCN2Q8NDA2 5059 aa9.69□□□□□ -0.86
CLDN4-201ENST00000340958 FP248Q71RG6 208 aaPredicted RBP9.67□□□□□ -0.86
CLDN4-201ENST00000340958 C9orf92A6NGG3 77 aa9.63□□□□□ -0.87
CLDN4-201ENST00000340958 PRO0628Q9UI54 55 aa9.63□□□□□ -0.87
CLDN4-201ENST00000340958 ZCCHC13Q8WW36 166 aaKnown RBP9.63□□□□□ -0.87
CLDN4-201ENST00000340958 TP53AIP1Q9HCN2 124 aa9.61□□□□□ -0.87
CLDN4-201ENST00000340958 PRR4Q16378 134 aa9.6□□□□□ -0.87
CLDN4-201ENST00000340958 IGLV7-46A0A075B6I9 117 aa9.59□□□□□ -0.87
CLDN4-201ENST00000340958 KRTAP16-1A8MUX0 517 aa9.56□□□□□ -0.88
CLDN4-201ENST00000340958 MP68P56378 58 aa9.55□□□□□ -0.88
CLDN4-201ENST00000340958 Q8N9P0 234 aaPredicted RBP9.54□□□□□ -0.88
CLDN4-201ENST00000340958 TRAV22A0A0B4J277 110 aa9.52□□□□□ -0.89
CLDN4-201ENST00000340958 H0Y9P7 68 aa9.52□□□□□ -0.89
CLDN4-201ENST00000340958 LRP2P98164 4655 aa9.47□□□□□ -0.89
CLDN4-201ENST00000340958 LINC00208Q96KT6 92 aa9.46□□□□□ -0.9
CLDN4-201ENST00000340958 CYP4F30PQ9H0H9 118 aa9.46□□□□□ -0.9
CLDN4-201ENST00000340958 KRTAP13-3Q3SY46 172 aa9.45□□□□□ -0.9
CLDN4-201ENST00000340958 C1orf64Q8NEQ6 169 aa9.45□□□□□ -0.9
CLDN4-201ENST00000340958 C20orf166-AS1Q96NR2 134 aa9.44□□□□□ -0.9
CLDN4-201ENST00000340958 UBR4Q5T4S7 5183 aa9.43□□□□□ -0.9
CLDN4-201ENST00000340958 H3BPC8 53 aa9.42□□□□□ -0.9
CLDN4-201ENST00000340958 Q5W150 140 aa9.42□□□□□ -0.9
CLDN4-201ENST00000340958 MPLKIPQ8TAP9 179 aa9.42□□□□□ -0.9
CLDN4-201ENST00000340958 A8MUU9 505 aa9.42□□□□□ -0.9
CLDN4-201ENST00000340958 LPAP08519 4548 aa9.41□□□□□ -0.9
CLDN4-201ENST00000340958 Q1T7F1 81 aa9.4□□□□□ -0.91
CLDN4-201ENST00000340958 Q75L30 129 aa9.39□□□□□ -0.91
CLDN4-201ENST00000340958 TPRXLQ17RH7 258 aa9.38□□□□□ -0.91
CLDN4-201ENST00000340958 XP32Q5T750 250 aa9.38□□□□□ -0.91
CLDN4-201ENST00000340958 BRK1Q8WUW1 75 aa9.36□□□□□ -0.91
CLDN4-201ENST00000340958 LOC101927531A0A1B0GV80 90 aa9.35□□□□□ -0.91
CLDN4-201ENST00000340958 ATP11AUNQ6ZP68 121 aa9.35□□□□□ -0.91
CLDN4-201ENST00000340958 SPANXA2-OT1Q8N9U9 137 aa9.35□□□□□ -0.91
CLDN4-201ENST00000340958 V9GYY9 64 aa9.32□□□□□ -0.92
CLDN4-201ENST00000340958 RPL37P61927 97 aaKnown RBP9.31□□□□□ -0.92
CLDN4-201ENST00000340958 IGKV2D-30A0A075B6S6 120 aa9.31□□□□□ -0.92
CLDN4-201ENST00000340958 IGKV2-30P06310 120 aa9.31□□□□□ -0.92
CLDN4-201ENST00000340958 PCOTHQ58A44 107 aa9.29□□□□□ -0.92
CLDN4-201ENST00000340958 C7orf65Q6ZTY9 151 aa9.24□□□□□ -0.93
CLDN4-201ENST00000340958 RNF213Q63HN8 5207 aa9.22□□□□□ -0.93
CLDN4-201ENST00000340958 SPINK7P58062 85 aa9.17□□□□□ -0.94
CLDN4-201ENST00000340958 PSPHP1O15172 72 aa9.17□□□□□ -0.94
CLDN4-201ENST00000340958 HRES1P13985 223 aa9.13□□□□□ -0.95
CLDN4-201ENST00000340958 A8MUN3 132 aa9.12□□□□□ -0.95
CLDN4-201ENST00000340958 SEC61BP60468 96 aaKnown RBP9.12□□□□□ -0.95
CLDN4-201ENST00000340958 Q5VV11 94 aa9.1□□□□□ -0.95
CLDN4-201ENST00000340958 COA5Q86WW8 74 aa9.1□□□□□ -0.95
CLDN4-201ENST00000340958 MUC2Q02817 5179 aa9.04□□□□□ -0.96
CLDN4-201ENST00000340958 PMAIP1Q13794 54 aa9.03□□□□□ -0.96
CLDN4-201ENST00000340958 MUC17Q685J3 4493 aa9.01□□□□□ -0.97
CLDN4-201ENST00000340958 PRR15LQ9BU68 103 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms