RNA–Protein interactions for RNA: ENST00000340457.8

UPK3BL1-201, Transcript of uroplakin 3B like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK3BL1, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1-201ENST00000340457 M0R2T5 61 aa7.44□□□□□ -1.22
UPK3BL1-201ENST00000340457 Q6Q795 121 aa7.43□□□□□ -1.22
UPK3BL1-201ENST00000340457 LIMD2Q9BT23 127 aa7.42□□□□□ -1.22
UPK3BL1-201ENST00000340457 FLGP20930 4061 aaPredicted RBP7.4□□□□□ -1.22
UPK3BL1-201ENST00000340457 A0A1W2PNM2 257 aa7.4□□□□□ -1.22
UPK3BL1-201ENST00000340457 UBL5Q9BZL1 73 aa7.4□□□□□ -1.22
UPK3BL1-201ENST00000340457 CD164Q04900 197 aa7.39□□□□□ -1.23
UPK3BL1-201ENST00000340457 COX6B2Q6YFQ2 88 aa7.38□□□□□ -1.23
UPK3BL1-201ENST00000340457 SS18L2Q9UHA2 77 aa7.38□□□□□ -1.23
UPK3BL1-201ENST00000340457 TRBV7-7A0A0K0K1E9 115 aa7.37□□□□□ -1.23
UPK3BL1-201ENST00000340457 LINC00846Q9NV44 126 aa7.36□□□□□ -1.23
UPK3BL1-201ENST00000340457 A0A087WSZ3 146 aa7.35□□□□□ -1.23
UPK3BL1-201ENST00000340457 A0A0G2JQZ4 141 aa7.35□□□□□ -1.23
UPK3BL1-201ENST00000340457 NREPQ16612 68 aa7.32□□□□□ -1.24
UPK3BL1-201ENST00000340457 ATP5EP2Q5VTU8 51 aa7.32□□□□□ -1.24
UPK3BL1-201ENST00000340457 Q6ZVQ6 151 aa7.32□□□□□ -1.24
UPK3BL1-201ENST00000340457 RPL37P61927 97 aaKnown RBP7.31□□□□□ -1.24
UPK3BL1-201ENST00000340457 C1orf195Q5TG92 126 aa7.31□□□□□ -1.24
UPK3BL1-201ENST00000340457 LINC00643Q86TS7 51 aa7.31□□□□□ -1.24
UPK3BL1-201ENST00000340457 Q5XG85 94 aa7.27□□□□□ -1.25
UPK3BL1-201ENST00000340457 KRTAP9-7A8MTY7 169 aa7.26□□□□□ -1.25
UPK3BL1-201ENST00000340457 BPY2O14599 106 aa7.26□□□□□ -1.25
UPK3BL1-201ENST00000340457 CXCL6P80162 114 aa7.26□□□□□ -1.25
UPK3BL1-201ENST00000340457 SSPOA2VEC9 5147 aa7.25□□□□□ -1.25
UPK3BL1-201ENST00000340457 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.25□□□□□ -1.25
UPK3BL1-201ENST00000340457 J3KT08 172 aa7.25□□□□□ -1.25
UPK3BL1-201ENST00000340457 SIGMAR1Q99720 223 aa7.25□□□□□ -1.25
UPK3BL1-201ENST00000340457 USH2AO75445 5202 aa7.24□□□□□ -1.25
UPK3BL1-201ENST00000340457 IGKV3D-7A0A0C4DH55 119 aa7.22□□□□□ -1.25
UPK3BL1-201ENST00000340457 LINC00472Q9H8W2 130 aa7.21□□□□□ -1.26
UPK3BL1-201ENST00000340457 MT-ATP8P03928 68 aa7.2□□□□□ -1.26
UPK3BL1-201ENST00000340457 IMUPQ9GZP8 106 aa7.2□□□□□ -1.26
UPK3BL1-201ENST00000340457 IGKV4-1P06312 121 aa7.19□□□□□ -1.26
UPK3BL1-201ENST00000340457 Q96NJ1 140 aa7.19□□□□□ -1.26
UPK3BL1-201ENST00000340457 NDUFB1O75438 58 aa7.18□□□□□ -1.26
UPK3BL1-201ENST00000340457 A8MWP4 228 aa7.17□□□□□ -1.26
UPK3BL1-201ENST00000340457 HIST1H4AP62805 103 aaKnown RBP7.17□□□□□ -1.26
UPK3BL1-201ENST00000340457 DEFB116Q30KQ4 102 aa7.16□□□□□ -1.26
UPK3BL1-201ENST00000340457 DSCR10P59022 87 aa7.14□□□□□ -1.27
UPK3BL1-201ENST00000340457 K7EQZ3 153 aa7.13□□□□□ -1.27
UPK3BL1-201ENST00000340457 FCGBPQ9Y6R7 5405 aaPredicted RBP7.13□□□□□ -1.27
UPK3BL1-201ENST00000340457 ATP11AUNQ6ZP68 121 aa7.12□□□□□ -1.27
UPK3BL1-201ENST00000340457 KRTAP9-8Q9BYQ0 159 aa7.12□□□□□ -1.27
UPK3BL1-201ENST00000340457 A0A1B0GVX0 72 aa7.11□□□□□ -1.27
UPK3BL1-201ENST00000340457 PRR15Q8IV56 129 aa7.11□□□□□ -1.27
UPK3BL1-201ENST00000340457 Q8N9L7 120 aa7.1□□□□□ -1.27
UPK3BL1-201ENST00000340457 C8orf87E5RJ46 101 aa7.09□□□□□ -1.27
UPK3BL1-201ENST00000340457 A0A087WVE0 104 aa7.08□□□□□ -1.28
UPK3BL1-201ENST00000340457 Q75L30 129 aa7.08□□□□□ -1.28
UPK3BL1-201ENST00000340457 IGHV6-1A0A0B4J1U7 121 aa7.07□□□□□ -1.28
UPK3BL1-201ENST00000340457 HCG22E2RYF7 251 aa7.07□□□□□ -1.28
UPK3BL1-201ENST00000340457 FAM236AA0A1B0GUQ0 79 aa7.05□□□□□ -1.28
UPK3BL1-201ENST00000340457 FAM236BA0A1B0GV22 79 aa7.05□□□□□ -1.28
UPK3BL1-201ENST00000340457 SCGB1A1P11684 91 aa7.05□□□□□ -1.28
UPK3BL1-201ENST00000340457 C8orf17Q9NRJ1 99 aa7.04□□□□□ -1.28
UPK3BL1-201ENST00000340457 MMP24-AS1A0A0U1RRL7 71 aa7.03□□□□□ -1.28
UPK3BL1-201ENST00000340457 CASC2Q6XLA1 102 aa7.02□□□□□ -1.28
UPK3BL1-201ENST00000340457 hDV103S1A0JD37 113 aa7.01□□□□□ -1.29
UPK3BL1-201ENST00000340457 WFDC13Q8IUB5 93 aa7.01□□□□□ -1.29
UPK3BL1-201ENST00000340457 ATOX1O00244 68 aa7.01□□□□□ -1.29
UPK3BL1-201ENST00000340457 LINC00313P59037 77 aa7.01□□□□□ -1.29
UPK3BL1-201ENST00000340457 TMEM254Q8TBM7 123 aa7.01□□□□□ -1.29
UPK3BL1-201ENST00000340457 MT2AP02795 61 aa7□□□□□ -1.29
UPK3BL1-201ENST00000340457 KRTAP19-1Q8IUB9 90 aa7□□□□□ -1.29
UPK3BL1-201ENST00000340457 LCE2BO14633 110 aa6.98□□□□□ -1.29
UPK3BL1-201ENST00000340457 MRPL34Q9BQ48 92 aaKnown RBP6.98□□□□□ -1.29
UPK3BL1-201ENST00000340457 SMIM20Q8N5G0 67 aa6.97□□□□□ -1.29
UPK3BL1-201ENST00000340457 MT1FP04733 61 aa6.95□□□□□ -1.3
UPK3BL1-201ENST00000340457 C20orf166-AS1Q96NR2 134 aa6.95□□□□□ -1.3
UPK3BL1-201ENST00000340457 A8MUU9 505 aa6.94□□□□□ -1.3
UPK3BL1-201ENST00000340457 NDUFS5O43920 106 aa6.93□□□□□ -1.3
UPK3BL1-201ENST00000340457 NOTCH2NLQ7Z3S9 236 aa6.93□□□□□ -1.3
UPK3BL1-201ENST00000340457 MACF1Q9UPN3 7388 aaKnown RBP6.91□□□□□ -1.3
UPK3BL1-201ENST00000340457 SYNE2Q8WXH0 6885 aaKnown RBP6.91□□□□□ -1.3
UPK3BL1-201ENST00000340457 FAM236DA0A1B0GTK5 79 aa6.91□□□□□ -1.3
UPK3BL1-201ENST00000340457 KRTAP16-1A8MUX0 517 aa6.91□□□□□ -1.3
UPK3BL1-201ENST00000340457 FAM236CP0DP71 79 aa6.91□□□□□ -1.3
UPK3BL1-201ENST00000340457 KRTAP10-10P60014 251 aa6.91□□□□□ -1.3
UPK3BL1-201ENST00000340457 ANAPC13Q9BS18 74 aa6.91□□□□□ -1.3
UPK3BL1-201ENST00000340457 KRTAP9-3Q9BYQ3 159 aa6.91□□□□□ -1.3
UPK3BL1-201ENST00000340457 TP53AIP1Q9HCN2 124 aa6.91□□□□□ -1.3
UPK3BL1-201ENST00000340457 Q8N9P0 234 aaPredicted RBP6.89□□□□□ -1.31
UPK3BL1-201ENST00000340457 TRAV7A0A075B6U4 112 aa6.88□□□□□ -1.31
UPK3BL1-201ENST00000340457 OCR1Q9BZK8 76 aa6.88□□□□□ -1.31
UPK3BL1-201ENST00000340457 UQCRQO14949 82 aa6.87□□□□□ -1.31
UPK3BL1-201ENST00000340457 SERP2Q8N6R1 65 aa6.87□□□□□ -1.31
UPK3BL1-201ENST00000340457 TRAV22A0A0B4J277 110 aa6.83□□□□□ -1.32
UPK3BL1-201ENST00000340457 HRES1P13985 223 aa6.81□□□□□ -1.32
UPK3BL1-201ENST00000340457 COX7CP15954 63 aa6.81□□□□□ -1.32
UPK3BL1-201ENST00000340457 MP68P56378 58 aa6.81□□□□□ -1.32
UPK3BL1-201ENST00000340457 C5orf47Q569G3 176 aa6.8□□□□□ -1.32
UPK3BL1-201ENST00000340457 MPLKIPQ8TAP9 179 aa6.8□□□□□ -1.32
UPK3BL1-201ENST00000340457 RBM12B-AS1Q9P1G2 102 aa6.8□□□□□ -1.32
UPK3BL1-201ENST00000340457 H0Y9P7 68 aa6.79□□□□□ -1.32
UPK3BL1-201ENST00000340457 H3BPC8 53 aa6.78□□□□□ -1.32
UPK3BL1-201ENST00000340457 ZCCHC13Q8WW36 166 aaKnown RBP6.77□□□□□ -1.32
UPK3BL1-201ENST00000340457 PCP4P48539 62 aa6.76□□□□□ -1.33
UPK3BL1-201ENST00000340457 KRTAP19-6Q3LI70 58 aa6.74□□□□□ -1.33
UPK3BL1-201ENST00000340457 C20orf197Q8N268 126 aa6.74□□□□□ -1.33
UPK3BL1-201ENST00000340457 LOC101927531A0A1B0GV80 90 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms