RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 DEFB105AQ8NG35 78 aa7.48□□□□□ -1.21
SIRPB3P-201ENST00000340424 C14orf132Q9NPU4 83 aa7.48□□□□□ -1.21
SIRPB3P-201ENST00000340424 ATOX1O00244 68 aa7.46□□□□□ -1.22
SIRPB3P-201ENST00000340424 UQCRQO14949 82 aa7.46□□□□□ -1.22
SIRPB3P-201ENST00000340424 LINC00846Q9NV44 126 aa7.46□□□□□ -1.22
SIRPB3P-201ENST00000340424 LOC110117498A0A087WWA1 95 aa7.45□□□□□ -1.22
SIRPB3P-201ENST00000340424 LINC01547P58512 204 aaPredicted RBP7.45□□□□□ -1.22
SIRPB3P-201ENST00000340424 KRTAP3-1Q9BYR8 98 aa7.45□□□□□ -1.22
SIRPB3P-201ENST00000340424 SMIM29Q86T20 159 aa7.44□□□□□ -1.22
SIRPB3P-201ENST00000340424 FAT4Q6V0I7 4981 aa7.43□□□□□ -1.22
SIRPB3P-201ENST00000340424 ASB16-AS1Q495Z4 193 aa7.43□□□□□ -1.22
SIRPB3P-201ENST00000340424 Q5XG85 94 aa7.43□□□□□ -1.22
SIRPB3P-201ENST00000340424 hADV29S1A0JD25 119 aa7.42□□□□□ -1.22
SIRPB3P-201ENST00000340424 PDE6GP18545 87 aa7.42□□□□□ -1.22
SIRPB3P-201ENST00000340424 SEC61BP60468 96 aaKnown RBP7.42□□□□□ -1.22
SIRPB3P-201ENST00000340424 HRCT1Q6UXD1 115 aa7.42□□□□□ -1.22
SIRPB3P-201ENST00000340424 COX7CP15954 63 aa7.41□□□□□ -1.22
SIRPB3P-201ENST00000340424 KRTAP9-9Q9BYP9 154 aa7.41□□□□□ -1.22
SIRPB3P-201ENST00000340424 KRTAP9-4Q9BYQ2 154 aa7.41□□□□□ -1.22
SIRPB3P-201ENST00000340424 SS18L2Q9UHA2 77 aa7.41□□□□□ -1.22
SIRPB3P-201ENST00000340424 F8WEM9 126 aa7.4□□□□□ -1.22
SIRPB3P-201ENST00000340424 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.4□□□□□ -1.22
SIRPB3P-201ENST00000340424 Q6ZQT0 140 aa7.39□□□□□ -1.23
SIRPB3P-201ENST00000340424 Q6ZQY7 126 aa7.38□□□□□ -1.23
SIRPB3P-201ENST00000340424 RBM3P98179 157 aaKnown RBP7.37□□□□□ -1.23
SIRPB3P-201ENST00000340424 LCE4AQ5TA78 99 aa7.37□□□□□ -1.23
SIRPB3P-201ENST00000340424 KRTAP9-7A8MTY7 169 aa7.36□□□□□ -1.23
SIRPB3P-201ENST00000340424 SERP2Q8N6R1 65 aa7.36□□□□□ -1.23
SIRPB3P-201ENST00000340424 IGKV3D-7A0A0C4DH55 119 aa7.35□□□□□ -1.23
SIRPB3P-201ENST00000340424 UBL5Q9BZL1 73 aa7.35□□□□□ -1.23
SIRPB3P-201ENST00000340424 IGLV8-61A0A075B6I0 122 aa7.34□□□□□ -1.23
SIRPB3P-201ENST00000340424 TRBV7-4A0A0J9YYF1 115 aa7.33□□□□□ -1.24
SIRPB3P-201ENST00000340424 C1orf195Q5TG92 126 aa7.32□□□□□ -1.24
SIRPB3P-201ENST00000340424 CXCL6P80162 114 aa7.31□□□□□ -1.24
SIRPB3P-201ENST00000340424 DSCR8Q96T75 97 aa7.31□□□□□ -1.24
SIRPB3P-201ENST00000340424 SVIPQ8NHG7 77 aa7.3□□□□□ -1.24
SIRPB3P-201ENST00000340424 A0A0G2JQZ4 141 aa7.29□□□□□ -1.24
SIRPB3P-201ENST00000340424 A0A087WVE0 104 aa7.28□□□□□ -1.24
SIRPB3P-201ENST00000340424 IGFL1Q6UW32 110 aa7.28□□□□□ -1.24
SIRPB3P-201ENST00000340424 SMIM20Q8N5G0 67 aa7.28□□□□□ -1.24
SIRPB3P-201ENST00000340424 C9orf92A6NGG3 77 aa7.27□□□□□ -1.25
SIRPB3P-201ENST00000340424 TMEM258P61165 79 aa7.27□□□□□ -1.25
SIRPB3P-201ENST00000340424 RPS28P62857 69 aaKnown RBP7.27□□□□□ -1.25
SIRPB3P-201ENST00000340424 Q6ZVQ6 151 aa7.27□□□□□ -1.25
SIRPB3P-201ENST00000340424 A0A1B0GW54 56 aa7.26□□□□□ -1.25
SIRPB3P-201ENST00000340424 KRTAP4-1Q9BYQ7 146 aa7.24□□□□□ -1.25
SIRPB3P-201ENST00000340424 TRAV7A0A075B6U4 112 aa7.23□□□□□ -1.25
SIRPB3P-201ENST00000340424 KRTAP4-8A0A0G2JLE6 195 aa7.22□□□□□ -1.25
SIRPB3P-201ENST00000340424 J3KT08 172 aa7.21□□□□□ -1.26
SIRPB3P-201ENST00000340424 PCOTHQ58A44 107 aa7.21□□□□□ -1.26
SIRPB3P-201ENST00000340424 LCE1DQ5T752 114 aa7.19□□□□□ -1.26
SIRPB3P-201ENST00000340424 RPL37P61927 97 aaKnown RBP7.18□□□□□ -1.26
SIRPB3P-201ENST00000340424 CYSTM1Q9H1C7 97 aa7.18□□□□□ -1.26
SIRPB3P-201ENST00000340424 KLKP1Q107X0 134 aa7.16□□□□□ -1.26
SIRPB3P-201ENST00000340424 A0A087WSZ3 146 aa7.11□□□□□ -1.27
SIRPB3P-201ENST00000340424 NDUFC1O43677 76 aa7.11□□□□□ -1.27
SIRPB3P-201ENST00000340424 H7BZZ5 65 aa7.1□□□□□ -1.27
SIRPB3P-201ENST00000340424 IGKV4-1P06312 121 aa7.1□□□□□ -1.27
SIRPB3P-201ENST00000340424 Q75L30 129 aa7.1□□□□□ -1.27
SIRPB3P-201ENST00000340424 C20orf197Q8N268 126 aa7.1□□□□□ -1.27
SIRPB3P-201ENST00000340424 NREPQ16612 68 aa7.09□□□□□ -1.27
SIRPB3P-201ENST00000340424 ATP5EP56381 51 aaPredicted RBP7.08□□□□□ -1.28
SIRPB3P-201ENST00000340424 KRTAP9-3Q9BYQ3 159 aa7.08□□□□□ -1.28
SIRPB3P-201ENST00000340424 FAM236DA0A1B0GTK5 79 aa7.07□□□□□ -1.28
SIRPB3P-201ENST00000340424 A0A1W2PNM2 257 aa7.07□□□□□ -1.28
SIRPB3P-201ENST00000340424 FAM236CP0DP71 79 aa7.07□□□□□ -1.28
SIRPB3P-201ENST00000340424 KRTAP19-2Q3LHN2 52 aa7.07□□□□□ -1.28
SIRPB3P-201ENST00000340424 ATP11AUNQ6ZP68 121 aa7.07□□□□□ -1.28
SIRPB3P-201ENST00000340424 BPY2O14599 106 aa7.06□□□□□ -1.28
SIRPB3P-201ENST00000340424 OCR1Q9BZK8 76 aa7.06□□□□□ -1.28
SIRPB3P-201ENST00000340424 Q96NJ1 140 aa7.05□□□□□ -1.28
SIRPB3P-201ENST00000340424 SERP1Q9Y6X1 66 aa7.04□□□□□ -1.28
SIRPB3P-201ENST00000340424 C20orf166-AS1Q96NR2 134 aa7.02□□□□□ -1.29
SIRPB3P-201ENST00000340424 A8MUU9 505 aa7□□□□□ -1.29
SIRPB3P-201ENST00000340424 MT1HP80294 61 aa7□□□□□ -1.29
SIRPB3P-201ENST00000340424 TMEM254Q8TBM7 123 aa7□□□□□ -1.29
SIRPB3P-201ENST00000340424 COX6B2Q6YFQ2 88 aa6.99□□□□□ -1.29
SIRPB3P-201ENST00000340424 DSCR10P59022 87 aa6.97□□□□□ -1.29
SIRPB3P-201ENST00000340424 LCE5AQ5TCM9 118 aa6.97□□□□□ -1.29
SIRPB3P-201ENST00000340424 Q8N9L7 120 aa6.97□□□□□ -1.29
SIRPB3P-201ENST00000340424 LINC00472Q9H8W2 130 aa6.97□□□□□ -1.29
SIRPB3P-201ENST00000340424 LINC00313P59037 77 aa6.96□□□□□ -1.3
SIRPB3P-201ENST00000340424 SNURFQ9Y675 71 aa6.96□□□□□ -1.3
SIRPB3P-201ENST00000340424 KRTAP4-7Q9BYR0 210 aa6.95□□□□□ -1.3
SIRPB3P-201ENST00000340424 C5orf47Q569G3 176 aa6.94□□□□□ -1.3
SIRPB3P-201ENST00000340424 FLGP20930 4061 aaPredicted RBP6.92□□□□□ -1.3
SIRPB3P-201ENST00000340424 SMIM26A0A096LP01 95 aa6.92□□□□□ -1.3
SIRPB3P-201ENST00000340424 ZCCHC13Q8WW36 166 aaKnown RBP6.92□□□□□ -1.3
SIRPB3P-201ENST00000340424 M0R2T5 61 aa6.9□□□□□ -1.3
SIRPB3P-201ENST00000340424 KRTAP4-9Q9BYQ8 210 aa6.9□□□□□ -1.3
SIRPB3P-201ENST00000340424 KRTAP16-1A8MUX0 517 aa6.89□□□□□ -1.31
SIRPB3P-201ENST00000340424 HCG22E2RYF7 251 aa6.89□□□□□ -1.31
SIRPB3P-201ENST00000340424 C8orf87E5RJ46 101 aa6.89□□□□□ -1.31
SIRPB3P-201ENST00000340424 K7EQZ3 153 aa6.89□□□□□ -1.31
SIRPB3P-201ENST00000340424 DEFB116Q30KQ4 102 aa6.89□□□□□ -1.31
SIRPB3P-201ENST00000340424 IGHV6-1A0A0B4J1U7 121 aa6.88□□□□□ -1.31
SIRPB3P-201ENST00000340424 A0A1B0GVX0 72 aa6.87□□□□□ -1.31
SIRPB3P-201ENST00000340424 KRTAP10-6P60371 365 aaPredicted RBP6.87□□□□□ -1.31
SIRPB3P-201ENST00000340424 NOTCH2NLQ7Z3S9 236 aa6.85□□□□□ -1.31
SIRPB3P-201ENST00000340424 H3BPC8 53 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms