RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 TRAV7A0A075B6U4 112 aa4.09□□□□□ -1.75
NUP43-201ENST00000340413 MMP24-AS1A0A0U1RRL7 71 aa4.09□□□□□ -1.76
NUP43-201ENST00000340413 C8orf17Q9NRJ1 99 aa4.09□□□□□ -1.76
NUP43-201ENST00000340413 FAM236AA0A1B0GUQ0 79 aa4.08□□□□□ -1.76
NUP43-201ENST00000340413 FAM236BA0A1B0GV22 79 aa4.08□□□□□ -1.76
NUP43-201ENST00000340413 K7EQZ3 153 aa4.08□□□□□ -1.76
NUP43-201ENST00000340413 UQCRQO14949 82 aa4.08□□□□□ -1.76
NUP43-201ENST00000340413 SERP2Q8N6R1 65 aa4.07□□□□□ -1.76
NUP43-201ENST00000340413 A0A0G2JQZ4 141 aa4.07□□□□□ -1.76
NUP43-201ENST00000340413 FAT1Q14517 4588 aa4.06□□□□□ -1.76
NUP43-201ENST00000340413 CASC2Q6XLA1 102 aa4.06□□□□□ -1.76
NUP43-201ENST00000340413 MT1HL1P0DM35 61 aa4.06□□□□□ -1.76
NUP43-201ENST00000340413 OCR1Q9BZK8 76 aa4.05□□□□□ -1.76
NUP43-201ENST00000340413 hDV103S1A0JD37 113 aa4.05□□□□□ -1.76
NUP43-201ENST00000340413 COX7CP15954 63 aa4.05□□□□□ -1.76
NUP43-201ENST00000340413 HRCT1Q6UXD1 115 aa4.05□□□□□ -1.76
NUP43-201ENST00000340413 MRPL34Q9BQ48 92 aaKnown RBP4.05□□□□□ -1.76
NUP43-201ENST00000340413 Q8N9P0 234 aaPredicted RBP4.05□□□□□ -1.76
NUP43-201ENST00000340413 ANAPC13Q9BS18 74 aa4.04□□□□□ -1.76
NUP43-201ENST00000340413 LINC00313P59037 77 aa4.04□□□□□ -1.76
NUP43-201ENST00000340413 BIRC6Q9NR09 4857 aa4.03□□□□□ -1.76
NUP43-201ENST00000340413 A0A087WVE0 104 aa4.03□□□□□ -1.76
NUP43-201ENST00000340413 NDUFC1O43677 76 aa4.03□□□□□ -1.76
NUP43-201ENST00000340413 KRTAP16-1A8MUX0 517 aa4.02□□□□□ -1.77
NUP43-201ENST00000340413 FAT3Q8TDW7 4589 aa4.02□□□□□ -1.77
NUP43-201ENST00000340413 A0A0U1RQV1 116 aa4.02□□□□□ -1.77
NUP43-201ENST00000340413 TNXBP22105 4242 aa4.02□□□□□ -1.77
NUP43-201ENST00000340413 KRTAP17-1Q9BYP8 105 aa4.01□□□□□ -1.77
NUP43-201ENST00000340413 C20orf166-AS1Q96NR2 134 aa4.01□□□□□ -1.77
NUP43-201ENST00000340413 KLKP1Q107X0 134 aa4□□□□□ -1.77
NUP43-201ENST00000340413 IGHV6-1A0A0B4J1U7 121 aa4□□□□□ -1.77
NUP43-201ENST00000340413 A8MUU9 505 aa4□□□□□ -1.77
NUP43-201ENST00000340413 Q8N9L7 120 aa4□□□□□ -1.77
NUP43-201ENST00000340413 Q75L30 129 aa3.99□□□□□ -1.77
NUP43-201ENST00000340413 HERC2O95714 4834 aa3.99□□□□□ -1.77
NUP43-201ENST00000340413 MP68P56378 58 aa3.98□□□□□ -1.77
NUP43-201ENST00000340413 TPRXLQ17RH7 258 aa3.98□□□□□ -1.77
NUP43-201ENST00000340413 DEFB116Q30KQ4 102 aa3.98□□□□□ -1.77
NUP43-201ENST00000340413 ATP5EP56381 51 aaPredicted RBP3.97□□□□□ -1.77
NUP43-201ENST00000340413 KRTAP13-3Q3SY46 172 aa3.97□□□□□ -1.77
NUP43-201ENST00000340413 ZCCHC13Q8WW36 166 aaKnown RBP3.97□□□□□ -1.77
NUP43-201ENST00000340413 TRAV22A0A0B4J277 110 aa3.96□□□□□ -1.77
NUP43-201ENST00000340413 LOC101927531A0A1B0GV80 90 aa3.96□□□□□ -1.77
NUP43-201ENST00000340413 WFDC13Q8IUB5 93 aa3.96□□□□□ -1.78
NUP43-201ENST00000340413 EPPK1P58107 5090 aaKnown RBP3.95□□□□□ -1.78
NUP43-201ENST00000340413 XP32Q5T750 250 aa3.94□□□□□ -1.78
NUP43-201ENST00000340413 IGLV7-46A0A075B6I9 117 aa3.94□□□□□ -1.78
NUP43-201ENST00000340413 SPANXA2-OT1Q8N9U9 137 aa3.94□□□□□ -1.78
NUP43-201ENST00000340413 H0Y9P7 68 aa3.93□□□□□ -1.78
NUP43-201ENST00000340413 TMEM258P61165 79 aa3.93□□□□□ -1.78
NUP43-201ENST00000340413 PRR4Q16378 134 aa3.92□□□□□ -1.78
NUP43-201ENST00000340413 NOTCH2NLQ7Z3S9 236 aa3.92□□□□□ -1.78
NUP43-201ENST00000340413 RPL37P61927 97 aaKnown RBP3.92□□□□□ -1.78
NUP43-201ENST00000340413 KRTAP4-5Q9BYR2 181 aa3.91□□□□□ -1.78
NUP43-201ENST00000340413 KIAA1109Q2LD37 5005 aa3.9□□□□□ -1.78
NUP43-201ENST00000340413 CCDC179H3BU77 68 aa3.9□□□□□ -1.79
NUP43-201ENST00000340413 IGKV2-30P06310 120 aa3.9□□□□□ -1.79
NUP43-201ENST00000340413 C4orf26Q17RF5 130 aa3.89□□□□□ -1.79
NUP43-201ENST00000340413 NDUFS5O43920 106 aa3.88□□□□□ -1.79
NUP43-201ENST00000340413 C1orf64Q8NEQ6 169 aa3.88□□□□□ -1.79
NUP43-201ENST00000340413 C20orf197Q8N268 126 aa3.88□□□□□ -1.79
NUP43-201ENST00000340413 CYP4F30PQ9H0H9 118 aa3.88□□□□□ -1.79
NUP43-201ENST00000340413 Q5W150 140 aa3.88□□□□□ -1.79
NUP43-201ENST00000340413 H7BZZ5 65 aa3.87□□□□□ -1.79
NUP43-201ENST00000340413 C7orf65Q6ZTY9 151 aa3.87□□□□□ -1.79
NUP43-201ENST00000340413 A8MUN3 132 aa3.85□□□□□ -1.79
NUP43-201ENST00000340413 LINC00208Q96KT6 92 aa3.85□□□□□ -1.79
NUP43-201ENST00000340413 KRTAP3-3Q9BYR6 98 aa3.85□□□□□ -1.79
NUP43-201ENST00000340413 KRTAP3-2Q9BYR7 98 aa3.85□□□□□ -1.79
NUP43-201ENST00000340413 ATP11AUNQ6ZP68 121 aa3.85□□□□□ -1.79
NUP43-201ENST00000340413 MYCBP2O75592 4640 aa3.84□□□□□ -1.79
NUP43-201ENST00000340413 RETNLBQ9BQ08 111 aa3.84□□□□□ -1.79
NUP43-201ENST00000340413 RPS28P62857 69 aaKnown RBP3.84□□□□□ -1.8
NUP43-201ENST00000340413 SEC61BP60468 96 aaKnown RBP3.83□□□□□ -1.8
NUP43-201ENST00000340413 MUC17Q685J3 4493 aa3.83□□□□□ -1.8
NUP43-201ENST00000340413 FAM236DA0A1B0GTK5 79 aa3.82□□□□□ -1.8
NUP43-201ENST00000340413 FAM236CP0DP71 79 aa3.82□□□□□ -1.8
NUP43-201ENST00000340413 C9orf92A6NGG3 77 aa3.82□□□□□ -1.8
NUP43-201ENST00000340413 SNURFQ9Y675 71 aa3.8□□□□□ -1.8
NUP43-201ENST00000340413 LRP1Q07954 4544 aaKnown RBP3.8□□□□□ -1.8
NUP43-201ENST00000340413 SERP1Q9Y6X1 66 aa3.8□□□□□ -1.8
NUP43-201ENST00000340413 IGKV2D-30A0A075B6S6 120 aa3.79□□□□□ -1.8
NUP43-201ENST00000340413 DMAC1Q96GE9 116 aa3.79□□□□□ -1.8
NUP43-201ENST00000340413 ABCA13Q86UQ4 5058 aa3.79□□□□□ -1.8
NUP43-201ENST00000340413 CYSTM1Q9H1C7 97 aa3.77□□□□□ -1.81
NUP43-201ENST00000340413 HRES1P13985 223 aa3.76□□□□□ -1.81
NUP43-201ENST00000340413 ACYP2P14621 99 aa3.76□□□□□ -1.81
NUP43-201ENST00000340413 SPINK7P58062 85 aa3.76□□□□□ -1.81
NUP43-201ENST00000340413 MPLKIPQ8TAP9 179 aa3.75□□□□□ -1.81
NUP43-201ENST00000340413 PRO0628Q9UI54 55 aa3.75□□□□□ -1.81
NUP43-201ENST00000340413 COX6B2Q6YFQ2 88 aa3.74□□□□□ -1.81
NUP43-201ENST00000340413 SPTSSBQ8NFR3 76 aa3.71□□□□□ -1.81
NUP43-201ENST00000340413 PCOTHQ58A44 107 aa3.71□□□□□ -1.82
NUP43-201ENST00000340413 RBM12B-AS1Q9P1G2 102 aa3.7□□□□□ -1.82
NUP43-201ENST00000340413 PCLOQ9Y6V0 5065 aa3.69□□□□□ -1.82
NUP43-201ENST00000340413 SMIM26A0A096LP01 95 aa3.69□□□□□ -1.82
NUP43-201ENST00000340413 PMAIP1Q13794 54 aa3.69□□□□□ -1.82
NUP43-201ENST00000340413 M0R2T5 61 aa3.68□□□□□ -1.82
NUP43-201ENST00000340413 COA5Q86WW8 74 aa3.67□□□□□ -1.82
NUP43-201ENST00000340413 H1FX-AS1Q4G0G2 97 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 168 ms