RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 Q5XG85 94 aa6□□□□□ -1.45
RBFOX1-202ENST00000340209 KLKP1Q107X0 134 aa5.99□□□□□ -1.45
RBFOX1-202ENST00000340209 PRR26Q8N8Z3 221 aa5.99□□□□□ -1.45
RBFOX1-202ENST00000340209 FAT1Q14517 4588 aa5.99□□□□□ -1.45
RBFOX1-202ENST00000340209 TYMSOSQ8TAI1 123 aa5.99□□□□□ -1.45
RBFOX1-202ENST00000340209 KMT2CQ8NEZ4 4911 aaKnown RBP5.99□□□□□ -1.45
RBFOX1-202ENST00000340209 SERP1Q9Y6X1 66 aa5.99□□□□□ -1.45
RBFOX1-202ENST00000340209 C8orf17Q9NRJ1 99 aa5.98□□□□□ -1.45
RBFOX1-202ENST00000340209 MMP24-AS1A0A0U1RRL7 71 aa5.98□□□□□ -1.45
RBFOX1-202ENST00000340209 ALMS1Q8TCU4 4167 aa5.97□□□□□ -1.45
RBFOX1-202ENST00000340209 FAT2Q9NYQ8 4349 aa5.97□□□□□ -1.45
RBFOX1-202ENST00000340209 KRTAP13-2Q52LG2 175 aa5.97□□□□□ -1.45
RBFOX1-202ENST00000340209 SPTSSBQ8NFR3 76 aa5.97□□□□□ -1.45
RBFOX1-202ENST00000340209 OXTP01178 125 aa5.97□□□□□ -1.45
RBFOX1-202ENST00000340209 A0A1B0GVX0 72 aa5.96□□□□□ -1.45
RBFOX1-202ENST00000340209 Q96NJ1 140 aa5.96□□□□□ -1.45
RBFOX1-202ENST00000340209 VPS13BQ7Z7G8 4022 aa5.96□□□□□ -1.46
RBFOX1-202ENST00000340209 C1orf64Q8NEQ6 169 aa5.95□□□□□ -1.46
RBFOX1-202ENST00000340209 Q6ZSA8 131 aa5.95□□□□□ -1.46
RBFOX1-202ENST00000340209 DYNC1H1Q14204 4646 aaKnown RBP5.94□□□□□ -1.46
RBFOX1-202ENST00000340209 PKD1P98161 4303 aa5.93□□□□□ -1.46
RBFOX1-202ENST00000340209 TRAV22A0A0B4J277 110 aa5.92□□□□□ -1.46
RBFOX1-202ENST00000340209 NDUFC1O43677 76 aa5.92□□□□□ -1.46
RBFOX1-202ENST00000340209 SSBP3-AS1Q7Z2R9 100 aa5.92□□□□□ -1.46
RBFOX1-202ENST00000340209 KRTAP29-1A8MX34 341 aaPredicted RBP5.92□□□□□ -1.46
RBFOX1-202ENST00000340209 MRPL34Q9BQ48 92 aaKnown RBP5.91□□□□□ -1.46
RBFOX1-202ENST00000340209 C9orf92A6NGG3 77 aa5.88□□□□□ -1.47
RBFOX1-202ENST00000340209 KRTAP1-4P0C5Y4 121 aa5.88□□□□□ -1.47
RBFOX1-202ENST00000340209 LINC00313P59037 77 aa5.88□□□□□ -1.47
RBFOX1-202ENST00000340209 FAM229BQ4G0N7 80 aa5.88□□□□□ -1.47
RBFOX1-202ENST00000340209 LINC00304Q8N9R0 145 aa5.87□□□□□ -1.47
RBFOX1-202ENST00000340209 RBM12B-AS1Q9P1G2 102 aa5.85□□□□□ -1.47
RBFOX1-202ENST00000340209 RYR2Q92736 4967 aa5.85□□□□□ -1.47
RBFOX1-202ENST00000340209 IGKV2D-30A0A075B6S6 120 aa5.85□□□□□ -1.47
RBFOX1-202ENST00000340209 IGKV2-30P06310 120 aa5.85□□□□□ -1.47
RBFOX1-202ENST00000340209 LIMD2Q9BT23 127 aa5.85□□□□□ -1.47
RBFOX1-202ENST00000340209 PSPHP1O15172 72 aa5.83□□□□□ -1.48
RBFOX1-202ENST00000340209 Q5W150 140 aa5.83□□□□□ -1.48
RBFOX1-202ENST00000340209 FAM229AH3BQW9 127 aa5.8□□□□□ -1.48
RBFOX1-202ENST00000340209 ZCCHC13Q8WW36 166 aaKnown RBP5.8□□□□□ -1.48
RBFOX1-202ENST00000340209 TP53AIP1Q9HCN2 124 aa5.8□□□□□ -1.48
RBFOX1-202ENST00000340209 A0A1B0GVY2 172 aa5.8□□□□□ -1.48
RBFOX1-202ENST00000340209 ATP5EP56381 51 aaPredicted RBP5.8□□□□□ -1.48
RBFOX1-202ENST00000340209 APOBP04114 4563 aaKnown RBP5.8□□□□□ -1.48
RBFOX1-202ENST00000340209 Q8N9P0 234 aaPredicted RBP5.79□□□□□ -1.48
RBFOX1-202ENST00000340209 RYR3Q15413 4870 aa5.78□□□□□ -1.48
RBFOX1-202ENST00000340209 SPINK1P00995 79 aa5.77□□□□□ -1.49
RBFOX1-202ENST00000340209 Q5VSD8 79 aa5.77□□□□□ -1.49
RBFOX1-202ENST00000340209 FP248Q71RG6 208 aaPredicted RBP5.77□□□□□ -1.49
RBFOX1-202ENST00000340209 KTN1-AS1Q86SY8 53 aa5.75□□□□□ -1.49
RBFOX1-202ENST00000340209 C8orf87E5RJ46 101 aa5.75□□□□□ -1.49
RBFOX1-202ENST00000340209 LRP1Q07954 4544 aaKnown RBP5.75□□□□□ -1.49
RBFOX1-202ENST00000340209 KIAA1109Q2LD37 5005 aa5.75□□□□□ -1.49
RBFOX1-202ENST00000340209 CHKB-CPT1BH3BT56 60 aa5.74□□□□□ -1.49
RBFOX1-202ENST00000340209 H3BPC8 53 aa5.72□□□□□ -1.49
RBFOX1-202ENST00000340209 COA5Q86WW8 74 aa5.72□□□□□ -1.49
RBFOX1-202ENST00000340209 SPAG11AQ6PDA7 123 aa5.71□□□□□ -1.5
RBFOX1-202ENST00000340209 MYCBP2O75592 4640 aa5.7□□□□□ -1.5
RBFOX1-202ENST00000340209 LOC101927531A0A1B0GV80 90 aa5.69□□□□□ -1.5
RBFOX1-202ENST00000340209 A6NED7 52 aa5.69□□□□□ -1.5
RBFOX1-202ENST00000340209 ASB16-AS1Q495Z4 193 aa5.69□□□□□ -1.5
RBFOX1-202ENST00000340209 CYP4F30PQ9H0H9 118 aa5.69□□□□□ -1.5
RBFOX1-202ENST00000340209 Q8N1X5 172 aa5.68□□□□□ -1.5
RBFOX1-202ENST00000340209 HRES1P13985 223 aa5.68□□□□□ -1.5
RBFOX1-202ENST00000340209 PRR15LQ9BU68 103 aa5.68□□□□□ -1.5
RBFOX1-202ENST00000340209 A8MUN3 132 aa5.67□□□□□ -1.5
RBFOX1-202ENST00000340209 IGLV7-46A0A075B6I9 117 aa5.65□□□□□ -1.5
RBFOX1-202ENST00000340209 C7orf65Q6ZTY9 151 aa5.65□□□□□ -1.5
RBFOX1-202ENST00000340209 LCA10Q71F78 164 aa5.64□□□□□ -1.51
RBFOX1-202ENST00000340209 KRTAP10-4P60372 401 aaPredicted RBP5.64□□□□□ -1.51
RBFOX1-202ENST00000340209 SPANXA2-OT1Q8N9U9 137 aa5.64□□□□□ -1.51
RBFOX1-202ENST00000340209 EPPK1P58107 5090 aaKnown RBP5.63□□□□□ -1.51
RBFOX1-202ENST00000340209 KRTAP16-1A8MUX0 517 aa5.63□□□□□ -1.51
RBFOX1-202ENST00000340209 RYR1P21817 5038 aa5.6□□□□□ -1.51
RBFOX1-202ENST00000340209 HSPG2P98160 4391 aa5.6□□□□□ -1.51
RBFOX1-202ENST00000340209 FAT3Q8TDW7 4589 aa5.59□□□□□ -1.51
RBFOX1-202ENST00000340209 KRTAP17-1Q9BYP8 105 aa5.58□□□□□ -1.52
RBFOX1-202ENST00000340209 ACYP2P14621 99 aa5.58□□□□□ -1.52
RBFOX1-202ENST00000340209 KRTAP13-3Q3SY46 172 aa5.58□□□□□ -1.52
RBFOX1-202ENST00000340209 A0A0A0MQY5 61 aa5.56□□□□□ -1.52
RBFOX1-202ENST00000340209 PKHD1L1Q86WI1 4243 aa5.54□□□□□ -1.52
RBFOX1-202ENST00000340209 A8MU10 97 aa5.53□□□□□ -1.52
RBFOX1-202ENST00000340209 ATP11AUNQ6ZP68 121 aa5.53□□□□□ -1.52
RBFOX1-202ENST00000340209 SPINK7P58062 85 aa5.52□□□□□ -1.53
RBFOX1-202ENST00000340209 LINC01554Q52M75 96 aa5.52□□□□□ -1.53
RBFOX1-202ENST00000340209 Q1T7F1 81 aa5.51□□□□□ -1.53
RBFOX1-202ENST00000340209 KRTAP4-5Q9BYR2 181 aa5.5□□□□□ -1.53
RBFOX1-202ENST00000340209 RPS29P62273 56 aaKnown RBP5.49□□□□□ -1.53
RBFOX1-202ENST00000340209 PRAC1Q96KF2 57 aa5.49□□□□□ -1.53
RBFOX1-202ENST00000340209 Q5VV11 94 aa5.49□□□□□ -1.53
RBFOX1-202ENST00000340209 DMAC1Q96GE9 116 aa5.48□□□□□ -1.53
RBFOX1-202ENST00000340209 KRTAP10-8P60410 259 aa5.47□□□□□ -1.53
RBFOX1-202ENST00000340209 A0A1B0GU69 56 aa5.45□□□□□ -1.54
RBFOX1-202ENST00000340209 J3QL48 77 aa5.45□□□□□ -1.54
RBFOX1-202ENST00000340209 A8MUU9 505 aa5.44□□□□□ -1.54
RBFOX1-202ENST00000340209 C20orf166-AS1Q96NR2 134 aa5.44□□□□□ -1.54
RBFOX1-202ENST00000340209 TNXBP22105 4242 aa5.42□□□□□ -1.54
RBFOX1-202ENST00000340209 XP32Q5T750 250 aa5.4□□□□□ -1.54
RBFOX1-202ENST00000340209 MT1HL1P0DM35 61 aa5.39□□□□□ -1.55
RBFOX1-202ENST00000340209 LINC01558Q9Y6Z2 57 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms