RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 LINC01554Q52M75 96 aa5.63□□□□□ -1.51
NECAP1-201ENST00000339754 MDFIQ99750 246 aa5.63□□□□□ -1.51
NECAP1-201ENST00000339754 HUWE1Q7Z6Z7 4374 aaKnown RBP5.63□□□□□ -1.51
NECAP1-201ENST00000339754 KRTAP13-1Q8IUC0 172 aa5.62□□□□□ -1.51
NECAP1-201ENST00000339754 DNAH10Q8IVF4 4471 aa5.62□□□□□ -1.51
NECAP1-201ENST00000339754 RTL8CO15255 209 aa5.62□□□□□ -1.51
NECAP1-201ENST00000339754 Q5W150 140 aa5.62□□□□□ -1.51
NECAP1-201ENST00000339754 IGLV9-49A0A0B4J1Y8 123 aa5.61□□□□□ -1.51
NECAP1-201ENST00000339754 KRTAP13-3Q3SY46 172 aa5.61□□□□□ -1.51
NECAP1-201ENST00000339754 ACYP2P14621 99 aa5.61□□□□□ -1.51
NECAP1-201ENST00000339754 XP32Q5T750 250 aa5.61□□□□□ -1.51
NECAP1-201ENST00000339754 MGAM2Q2M2H8 2515 aa5.6□□□□□ -1.51
NECAP1-201ENST00000339754 SPATA8Q6RVD6 105 aa5.6□□□□□ -1.51
NECAP1-201ENST00000339754 KRTAP1-5Q9BYS1 174 aa5.6□□□□□ -1.51
NECAP1-201ENST00000339754 CDK2AP2O75956 126 aa5.57□□□□□ -1.52
NECAP1-201ENST00000339754 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.57□□□□□ -1.52
NECAP1-201ENST00000339754 LYSTQ99698 3801 aa5.56□□□□□ -1.52
NECAP1-201ENST00000339754 A0A1B0GU69 56 aa5.56□□□□□ -1.52
NECAP1-201ENST00000339754 LINC00483Q53H64 154 aa5.56□□□□□ -1.52
NECAP1-201ENST00000339754 DMAC1Q96GE9 116 aa5.56□□□□□ -1.52
NECAP1-201ENST00000339754 COL7A1Q02388 2944 aa5.55□□□□□ -1.52
NECAP1-201ENST00000339754 H3BS24 57 aa5.55□□□□□ -1.52
NECAP1-201ENST00000339754 KRTAP9-2Q9BYQ4 174 aa5.55□□□□□ -1.52
NECAP1-201ENST00000339754 PANO1I0J062 215 aa5.55□□□□□ -1.52
NECAP1-201ENST00000339754 DNAH9Q9NYC9 4486 aa5.54□□□□□ -1.52
NECAP1-201ENST00000339754 KRTAP9-6A0A140TA67 174 aa5.53□□□□□ -1.52
NECAP1-201ENST00000339754 WWC2-AS2Q96NR7 200 aa5.53□□□□□ -1.52
NECAP1-201ENST00000339754 MIR22HGQ0VDD5 57 aa5.52□□□□□ -1.53
NECAP1-201ENST00000339754 C14orf177Q52M58 125 aa5.51□□□□□ -1.53
NECAP1-201ENST00000339754 UQCR11O14957 56 aa5.5□□□□□ -1.53
NECAP1-201ENST00000339754 CSAG1Q6PB30 78 aa5.5□□□□□ -1.53
NECAP1-201ENST00000339754 STAB2Q8WWQ8 2551 aa5.49□□□□□ -1.53
NECAP1-201ENST00000339754 ANAPC11Q9NYG5 84 aa5.49□□□□□ -1.53
NECAP1-201ENST00000339754 SPINK6Q6UWN8 80 aa5.48□□□□□ -1.53
NECAP1-201ENST00000339754 UBE2DNLQ8IWF7 75 aa5.46□□□□□ -1.54
NECAP1-201ENST00000339754 RETNLBQ9BQ08 111 aa5.46□□□□□ -1.54
NECAP1-201ENST00000339754 APLNQ9ULZ1 77 aa5.46□□□□□ -1.54
NECAP1-201ENST00000339754 ZNF706Q9Y5V0 76 aaPredicted RBP5.46□□□□□ -1.54
NECAP1-201ENST00000339754 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.45□□□□□ -1.54
NECAP1-201ENST00000339754 DYNC2H1Q8NCM8 4307 aaKnown RBP5.44□□□□□ -1.54
NECAP1-201ENST00000339754 ZNF861PO60384 105 aa5.44□□□□□ -1.54
NECAP1-201ENST00000339754 IGKV2-30P06310 120 aa5.44□□□□□ -1.54
NECAP1-201ENST00000339754 SPACA4Q8TDM5 124 aa5.44□□□□□ -1.54
NECAP1-201ENST00000339754 DNAH7Q8WXX0 4024 aa5.43□□□□□ -1.54
NECAP1-201ENST00000339754 DNAH8Q96JB1 4490 aa5.43□□□□□ -1.54
NECAP1-201ENST00000339754 PRKDCP78527 4128 aaKnown RBP5.42□□□□□ -1.54
NECAP1-201ENST00000339754 FAM229AH3BQW9 127 aa5.42□□□□□ -1.54
NECAP1-201ENST00000339754 PLECQ15149 4684 aaKnown RBP5.42□□□□□ -1.54
NECAP1-201ENST00000339754 DNHD1Q96M86 4753 aa5.41□□□□□ -1.54
NECAP1-201ENST00000339754 PSORS1C2Q9UIG4 136 aa5.41□□□□□ -1.54
NECAP1-201ENST00000339754 MEGF8Q7Z7M0 2845 aa5.4□□□□□ -1.54
NECAP1-201ENST00000339754 IGLV5-52A0A0A0MRZ9 124 aa5.4□□□□□ -1.55
NECAP1-201ENST00000339754 NUPR2A6NF83 97 aa5.39□□□□□ -1.55
NECAP1-201ENST00000339754 IGLV7-43P04211 117 aa5.39□□□□□ -1.55
NECAP1-201ENST00000339754 Q6ZRN7 208 aaPredicted RBP5.38□□□□□ -1.55
NECAP1-201ENST00000339754 CIRBP-AS1Q8TBR5 109 aa5.37□□□□□ -1.55
NECAP1-201ENST00000339754 STARD9Q9P2P6 4700 aa5.36□□□□□ -1.55
NECAP1-201ENST00000339754 LCE3BQ5TA77 95 aa5.36□□□□□ -1.55
NECAP1-201ENST00000339754 NBDYA0A0U1RRE5 68 aa5.35□□□□□ -1.55
NECAP1-201ENST00000339754 FRAS1Q86XX4 4008 aa5.35□□□□□ -1.55
NECAP1-201ENST00000339754 C1orf134Q5TEV5 83 aa5.34□□□□□ -1.55
NECAP1-201ENST00000339754 KRTAP16-1A8MUX0 517 aa5.33□□□□□ -1.56
NECAP1-201ENST00000339754 VPS13DQ5THJ4 4388 aa5.33□□□□□ -1.56
NECAP1-201ENST00000339754 IGKV2D-30A0A075B6S6 120 aa5.32□□□□□ -1.56
NECAP1-201ENST00000339754 SSBP3-AS1Q7Z2R9 100 aa5.31□□□□□ -1.56
NECAP1-201ENST00000339754 A8MUU9 505 aa5.31□□□□□ -1.56
NECAP1-201ENST00000339754 KRTAP25-1Q3LHN0 102 aa5.31□□□□□ -1.56
NECAP1-201ENST00000339754 KRTAP4-8A0A0G2JLE6 195 aa5.3□□□□□ -1.56
NECAP1-201ENST00000339754 DNAH17Q9UFH2 4485 aa5.29□□□□□ -1.56
NECAP1-201ENST00000339754 Q6ZSA8 131 aa5.29□□□□□ -1.56
NECAP1-201ENST00000339754 ROMO1P60602 79 aa5.28□□□□□ -1.56
NECAP1-201ENST00000339754 LINC00304Q8N9R0 145 aa5.28□□□□□ -1.56
NECAP1-201ENST00000339754 A0A087WTM6 91 aa5.28□□□□□ -1.56
NECAP1-201ENST00000339754 H0YAA0 97 aa5.28□□□□□ -1.56
NECAP1-201ENST00000339754 SPINK1P00995 79 aa5.27□□□□□ -1.57
NECAP1-201ENST00000339754 HECTD4Q9Y4D8 3996 aa5.27□□□□□ -1.57
NECAP1-201ENST00000339754 KMT2AQ03164 3969 aa5.27□□□□□ -1.57
NECAP1-201ENST00000339754 DNAH2Q9P225 4427 aa5.27□□□□□ -1.57
NECAP1-201ENST00000339754 LY6G6CO95867 125 aa5.27□□□□□ -1.57
NECAP1-201ENST00000339754 KRTAP9-9Q9BYP9 154 aa5.27□□□□□ -1.57
NECAP1-201ENST00000339754 KRTAP9-4Q9BYQ2 154 aa5.27□□□□□ -1.57
NECAP1-201ENST00000339754 FBN3Q75N90 2809 aa5.26□□□□□ -1.57
NECAP1-201ENST00000339754 KRTAP4-12Q9BQ66 201 aa5.24□□□□□ -1.57
NECAP1-201ENST00000339754 TGP01266 2768 aa5.23□□□□□ -1.57
NECAP1-201ENST00000339754 Q8N1X5 172 aa5.23□□□□□ -1.57
NECAP1-201ENST00000339754 KRTAP13-2Q52LG2 175 aa5.22□□□□□ -1.57
NECAP1-201ENST00000339754 TYMSOSQ8TAI1 123 aa5.2□□□□□ -1.58
NECAP1-201ENST00000339754 A0A1B0GU33 70 aa5.18□□□□□ -1.58
NECAP1-201ENST00000339754 P0C880 135 aa5.17□□□□□ -1.58
NECAP1-201ENST00000339754 H1FX-AS1Q4G0G2 97 aa5.15□□□□□ -1.58
NECAP1-201ENST00000339754 FLG2Q5D862 2391 aaPredicted RBP5.15□□□□□ -1.58
NECAP1-201ENST00000339754 KRTAP4-7Q9BYR0 210 aa5.15□□□□□ -1.59
NECAP1-201ENST00000339754 CRIPTQ9P021 101 aa5.15□□□□□ -1.59
NECAP1-201ENST00000339754 DNAH6Q9C0G6 4158 aa5.13□□□□□ -1.59
NECAP1-201ENST00000339754 HYDINQ4G0P3 5121 aa5.13□□□□□ -1.59
NECAP1-201ENST00000339754 KRTAP10-2P60368 255 aa5.11□□□□□ -1.59
NECAP1-201ENST00000339754 KRTAP19-1Q8IUB9 90 aa5.11□□□□□ -1.59
NECAP1-201ENST00000339754 KRTAP3-1Q9BYR8 98 aa5.11□□□□□ -1.59
NECAP1-201ENST00000339754 DNAH11Q96DT5 4516 aa5.11□□□□□ -1.59
NECAP1-201ENST00000339754 DNAH5Q8TE73 4624 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms