RNA–Protein interactions for RNA: ENST00000339113.8

ATAD3A-201, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 2

Gene ATAD3A, Length 2,330 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-201ENST00000339113 WFDC13Q8IUB5 93 aa10.2□□□□□ -0.78
ATAD3A-201ENST00000339113 SPANXA2-OT1Q8N9U9 137 aa10.2□□□□□ -0.78
ATAD3A-201ENST00000339113 PRR15Q8IV56 129 aa10.19□□□□□ -0.78
ATAD3A-201ENST00000339113 LINC00208Q96KT6 92 aa10.16□□□□□ -0.78
ATAD3A-201ENST00000339113 RPL37AP61513 92 aaKnown RBP10.15□□□□□ -0.78
ATAD3A-201ENST00000339113 CASC2Q6XLA1 102 aa10.15□□□□□ -0.78
ATAD3A-201ENST00000339113 A8MWP4 228 aa10.15□□□□□ -0.79
ATAD3A-201ENST00000339113 LINC00472Q9H8W2 130 aa10.15□□□□□ -0.79
ATAD3A-201ENST00000339113 PRR4Q16378 134 aa10.13□□□□□ -0.79
ATAD3A-201ENST00000339113 H0Y9P7 68 aa10.12□□□□□ -0.79
ATAD3A-201ENST00000339113 A0A087X002 238 aa10.1□□□□□ -0.79
ATAD3A-201ENST00000339113 PSPHP1O15172 72 aa10.1□□□□□ -0.79
ATAD3A-201ENST00000339113 SMR3BP02814 79 aaPredicted RBP10.1□□□□□ -0.79
ATAD3A-201ENST00000339113 APOBP04114 4563 aaKnown RBP10.09□□□□□ -0.79
ATAD3A-201ENST00000339113 KRTAP1-4P0C5Y4 121 aa10.07□□□□□ -0.8
ATAD3A-201ENST00000339113 KRTAP13-2Q52LG2 175 aa10.07□□□□□ -0.8
ATAD3A-201ENST00000339113 Q96NJ1 140 aa10.07□□□□□ -0.8
ATAD3A-201ENST00000339113 RYR3Q15413 4870 aa10.06□□□□□ -0.8
ATAD3A-201ENST00000339113 LIMD2Q9BT23 127 aa10.04□□□□□ -0.8
ATAD3A-201ENST00000339113 A8MUN3 132 aa10.04□□□□□ -0.8
ATAD3A-201ENST00000339113 SSBP3-AS1Q7Z2R9 100 aa10.03□□□□□ -0.8
ATAD3A-201ENST00000339113 FAT1Q14517 4588 aa10.03□□□□□ -0.8
ATAD3A-201ENST00000339113 Q8N9P0 234 aaPredicted RBP10.02□□□□□ -0.8
ATAD3A-201ENST00000339113 MMP24-AS1A0A0U1RRL7 71 aa10.02□□□□□ -0.81
ATAD3A-201ENST00000339113 Q5VV11 94 aa10.02□□□□□ -0.81
ATAD3A-201ENST00000339113 IGLV7-46A0A075B6I9 117 aa10□□□□□ -0.81
ATAD3A-201ENST00000339113 ASB16-AS1Q495Z4 193 aa10□□□□□ -0.81
ATAD3A-201ENST00000339113 PLA2G1BP04054 148 aaKnown RBP9.98□□□□□ -0.81
ATAD3A-201ENST00000339113 TP53AIP1Q9HCN2 124 aa9.98□□□□□ -0.81
ATAD3A-201ENST00000339113 PMAIP1Q13794 54 aa9.97□□□□□ -0.81
ATAD3A-201ENST00000339113 KRTAP10-4P60372 401 aaPredicted RBP9.96□□□□□ -0.81
ATAD3A-201ENST00000339113 CD164Q04900 197 aa9.96□□□□□ -0.81
ATAD3A-201ENST00000339113 SPINK6Q6UWN8 80 aa9.96□□□□□ -0.82
ATAD3A-201ENST00000339113 LOC101927531A0A1B0GV80 90 aa9.92□□□□□ -0.82
ATAD3A-201ENST00000339113 COA5Q86WW8 74 aa9.91□□□□□ -0.82
ATAD3A-201ENST00000339113 CHKB-CPT1BH3BT56 60 aa9.89□□□□□ -0.83
ATAD3A-201ENST00000339113 Q75L30 129 aa9.89□□□□□ -0.83
ATAD3A-201ENST00000339113 PRR26Q8N8Z3 221 aa9.88□□□□□ -0.83
ATAD3A-201ENST00000339113 PRR15LQ9BU68 103 aa9.88□□□□□ -0.83
ATAD3A-201ENST00000339113 TYMSOSQ8TAI1 123 aa9.88□□□□□ -0.83
ATAD3A-201ENST00000339113 C8orf17Q9NRJ1 99 aa9.87□□□□□ -0.83
ATAD3A-201ENST00000339113 IGHV6-1A0A0B4J1U7 121 aa9.87□□□□□ -0.83
ATAD3A-201ENST00000339113 A0A1B0GVX0 72 aa9.85□□□□□ -0.83
ATAD3A-201ENST00000339113 NOTCH2NLQ7Z3S9 236 aa9.85□□□□□ -0.83
ATAD3A-201ENST00000339113 CDK2AP2O75956 126 aa9.83□□□□□ -0.84
ATAD3A-201ENST00000339113 A8MU10 97 aa9.83□□□□□ -0.84
ATAD3A-201ENST00000339113 PCOTHQ58A44 107 aa9.81□□□□□ -0.84
ATAD3A-201ENST00000339113 LINC01558Q9Y6Z2 57 aa9.81□□□□□ -0.84
ATAD3A-201ENST00000339113 HSPG2P98160 4391 aa9.8□□□□□ -0.84
ATAD3A-201ENST00000339113 ATP11AUNQ6ZP68 121 aa9.8□□□□□ -0.84
ATAD3A-201ENST00000339113 C4orf48Q5BLP8 95 aa9.78□□□□□ -0.84
ATAD3A-201ENST00000339113 MRPL34Q9BQ48 92 aaKnown RBP9.78□□□□□ -0.84
ATAD3A-201ENST00000339113 LCA10Q71F78 164 aa9.78□□□□□ -0.84
ATAD3A-201ENST00000339113 A6NED7 52 aa9.76□□□□□ -0.85
ATAD3A-201ENST00000339113 SPINK1P00995 79 aa9.75□□□□□ -0.85
ATAD3A-201ENST00000339113 RYR1P21817 5038 aa9.75□□□□□ -0.85
ATAD3A-201ENST00000339113 LINC00304Q8N9R0 145 aa9.74□□□□□ -0.85
ATAD3A-201ENST00000339113 KRTAP17-1Q9BYP8 105 aa9.74□□□□□ -0.85
ATAD3A-201ENST00000339113 CDC42SE1Q9NRR8 79 aa9.74□□□□□ -0.85
ATAD3A-201ENST00000339113 FAM229AH3BQW9 127 aa9.73□□□□□ -0.85
ATAD3A-201ENST00000339113 NDUFS5O43920 106 aa9.73□□□□□ -0.85
ATAD3A-201ENST00000339113 HRES1P13985 223 aa9.72□□□□□ -0.85
ATAD3A-201ENST00000339113 PKHD1L1Q86WI1 4243 aa9.71□□□□□ -0.85
ATAD3A-201ENST00000339113 Q5VSD8 79 aa9.71□□□□□ -0.86
ATAD3A-201ENST00000339113 SPAG11AQ6PDA7 123 aa9.7□□□□□ -0.86
ATAD3A-201ENST00000339113 KTN1-AS1Q86SY8 53 aa9.7□□□□□ -0.86
ATAD3A-201ENST00000339113 EPPK1P58107 5090 aaKnown RBP9.69□□□□□ -0.86
ATAD3A-201ENST00000339113 KIAA1109Q2LD37 5005 aa9.68□□□□□ -0.86
ATAD3A-201ENST00000339113 SPTSSBQ8NFR3 76 aa9.67□□□□□ -0.86
ATAD3A-201ENST00000339113 LRP1Q07954 4544 aaKnown RBP9.66□□□□□ -0.86
ATAD3A-201ENST00000339113 A6NN06 94 aa9.65□□□□□ -0.86
ATAD3A-201ENST00000339113 LINC00313P59037 77 aa9.65□□□□□ -0.86
ATAD3A-201ENST00000339113 KRTAP13-3Q3SY46 172 aa9.65□□□□□ -0.86
ATAD3A-201ENST00000339113 C8orf87E5RJ46 101 aa9.65□□□□□ -0.87
ATAD3A-201ENST00000339113 RPS29P62273 56 aaKnown RBP9.64□□□□□ -0.87
ATAD3A-201ENST00000339113 Q5W150 140 aa9.6□□□□□ -0.87
ATAD3A-201ENST00000339113 KRTAP16-1A8MUX0 517 aa9.58□□□□□ -0.88
ATAD3A-201ENST00000339113 TNXBP22105 4242 aa9.57□□□□□ -0.88
ATAD3A-201ENST00000339113 ACYP2P14621 99 aa9.56□□□□□ -0.88
ATAD3A-201ENST00000339113 SPINK7P58062 85 aa9.56□□□□□ -0.88
ATAD3A-201ENST00000339113 Q8N1X5 172 aa9.56□□□□□ -0.88
ATAD3A-201ENST00000339113 RBM12B-AS1Q9P1G2 102 aa9.55□□□□□ -0.88
ATAD3A-201ENST00000339113 KRTAP10-8P60410 259 aa9.54□□□□□ -0.88
ATAD3A-201ENST00000339113 RETNLBQ9BQ08 111 aa9.53□□□□□ -0.88
ATAD3A-201ENST00000339113 FAT3Q8TDW7 4589 aa9.52□□□□□ -0.89
ATAD3A-201ENST00000339113 DMAC1Q96GE9 116 aa9.51□□□□□ -0.89
ATAD3A-201ENST00000339113 FLG2Q5D862 2391 aaPredicted RBP9.5□□□□□ -0.89
ATAD3A-201ENST00000339113 C7orf65Q6ZTY9 151 aa9.5□□□□□ -0.89
ATAD3A-201ENST00000339113 MYCBP2O75592 4640 aa9.47□□□□□ -0.89
ATAD3A-201ENST00000339113 C9orf92A6NGG3 77 aa9.43□□□□□ -0.9
ATAD3A-201ENST00000339113 IGKV2-30P06310 120 aa9.39□□□□□ -0.91
ATAD3A-201ENST00000339113 MT1HL1P0DM35 61 aa9.39□□□□□ -0.91
ATAD3A-201ENST00000339113 KRTAP4-5Q9BYR2 181 aa9.38□□□□□ -0.91
ATAD3A-201ENST00000339113 DMBT1Q9UGM3 2413 aaPredicted RBP9.38□□□□□ -0.91
ATAD3A-201ENST00000339113 H3BS24 57 aa9.35□□□□□ -0.91
ATAD3A-201ENST00000339113 A0A1B0GU69 56 aa9.34□□□□□ -0.91
ATAD3A-201ENST00000339113 SPATA8Q6RVD6 105 aa9.32□□□□□ -0.92
ATAD3A-201ENST00000339113 C20orf166-AS1Q96NR2 134 aa9.3□□□□□ -0.92
ATAD3A-201ENST00000339113 A8MUU9 505 aa9.3□□□□□ -0.92
ATAD3A-201ENST00000339113 IGKV2D-30A0A075B6S6 120 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms