RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 TRAV22A0A0B4J277 110 aa6.57□□□□□ -1.36
RTN3-201ENST00000338850 ASB16-AS1Q495Z4 193 aa6.57□□□□□ -1.36
RTN3-201ENST00000338850 DMBT1Q9UGM3 2413 aaPredicted RBP6.57□□□□□ -1.36
RTN3-201ENST00000338850 CHTF8P0CG12 524 aa6.56□□□□□ -1.36
RTN3-201ENST00000338850 MOBPQ13875 183 aa6.56□□□□□ -1.36
RTN3-201ENST00000338850 Q5VSD8 79 aa6.56□□□□□ -1.36
RTN3-201ENST00000338850 CASC2Q6XLA1 102 aa6.56□□□□□ -1.36
RTN3-201ENST00000338850 Q1T7F1 81 aa6.55□□□□□ -1.36
RTN3-201ENST00000338850 IGLV5-52A0A0A0MRZ9 124 aa6.54□□□□□ -1.36
RTN3-201ENST00000338850 TP53AIP1Q9HCN2 124 aa6.54□□□□□ -1.36
RTN3-201ENST00000338850 SRRM2Q9UQ35 2752 aaKnown RBP6.53□□□□□ -1.36
RTN3-201ENST00000338850 MMP24-AS1A0A0U1RRL7 71 aa6.53□□□□□ -1.36
RTN3-201ENST00000338850 SMR3BP02814 79 aaPredicted RBP6.53□□□□□ -1.36
RTN3-201ENST00000338850 WFDC13Q8IUB5 93 aa6.53□□□□□ -1.36
RTN3-201ENST00000338850 V9GYY9 64 aa6.53□□□□□ -1.36
RTN3-201ENST00000338850 VPS13BQ7Z7G8 4022 aa6.53□□□□□ -1.36
RTN3-201ENST00000338850 HERC1Q15751 4861 aa6.52□□□□□ -1.37
RTN3-201ENST00000338850 FAM229BQ4G0N7 80 aa6.52□□□□□ -1.37
RTN3-201ENST00000338850 C1orf64Q8NEQ6 169 aa6.52□□□□□ -1.37
RTN3-201ENST00000338850 FLG2Q5D862 2391 aaPredicted RBP6.52□□□□□ -1.37
RTN3-201ENST00000338850 H0Y9P7 68 aa6.51□□□□□ -1.37
RTN3-201ENST00000338850 Q96NJ1 140 aa6.51□□□□□ -1.37
RTN3-201ENST00000338850 KRTAP4-8Q9BYQ9 185 aa6.51□□□□□ -1.37
RTN3-201ENST00000338850 PLAC8Q9NZF1 115 aa6.51□□□□□ -1.37
RTN3-201ENST00000338850 A0A0G2JQZ4 141 aa6.5□□□□□ -1.37
RTN3-201ENST00000338850 FAM229AH3BQW9 127 aa6.49□□□□□ -1.37
RTN3-201ENST00000338850 MYCBP2O75592 4640 aa6.48□□□□□ -1.37
RTN3-201ENST00000338850 PANO1I0J062 215 aa6.48□□□□□ -1.37
RTN3-201ENST00000338850 C1orf195Q5TG92 126 aa6.48□□□□□ -1.37
RTN3-201ENST00000338850 LINC00208Q96KT6 92 aa6.48□□□□□ -1.37
RTN3-201ENST00000338850 DNAH8Q96JB1 4490 aa6.48□□□□□ -1.37
RTN3-201ENST00000338850 DEFB116Q30KQ4 102 aa6.47□□□□□ -1.37
RTN3-201ENST00000338850 Q6ZSA8 131 aa6.47□□□□□ -1.37
RTN3-201ENST00000338850 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.47□□□□□ -1.37
RTN3-201ENST00000338850 ZNF861PO60384 105 aa6.46□□□□□ -1.38
RTN3-201ENST00000338850 CD164Q04900 197 aa6.46□□□□□ -1.38
RTN3-201ENST00000338850 C8orf17Q9NRJ1 99 aa6.45□□□□□ -1.38
RTN3-201ENST00000338850 A0A1B0GVX0 72 aa6.44□□□□□ -1.38
RTN3-201ENST00000338850 IGLV7-46A0A075B6I9 117 aa6.43□□□□□ -1.38
RTN3-201ENST00000338850 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.42□□□□□ -1.38
RTN3-201ENST00000338850 PSORS1C2Q9UIG4 136 aa6.42□□□□□ -1.38
RTN3-201ENST00000338850 PLA2G1BP04054 148 aaKnown RBP6.41□□□□□ -1.38
RTN3-201ENST00000338850 MPLKIPQ8TAP9 179 aa6.41□□□□□ -1.38
RTN3-201ENST00000338850 LIMD2Q9BT23 127 aa6.4□□□□□ -1.38
RTN3-201ENST00000338850 IGLV9-49A0A0B4J1Y8 123 aa6.39□□□□□ -1.39
RTN3-201ENST00000338850 J3QL48 77 aa6.39□□□□□ -1.39
RTN3-201ENST00000338850 MRPL34Q9BQ48 92 aaKnown RBP6.39□□□□□ -1.39
RTN3-201ENST00000338850 KRTAP9-2Q9BYQ4 174 aa6.39□□□□□ -1.39
RTN3-201ENST00000338850 KRTAP10-4P60372 401 aaPredicted RBP6.38□□□□□ -1.39
RTN3-201ENST00000338850 XP32Q5T750 250 aa6.38□□□□□ -1.39
RTN3-201ENST00000338850 SSBP3-AS1Q7Z2R9 100 aa6.38□□□□□ -1.39
RTN3-201ENST00000338850 C8orf87E5RJ46 101 aa6.37□□□□□ -1.39
RTN3-201ENST00000338850 CIRBP-AS1Q8TBR5 109 aa6.37□□□□□ -1.39
RTN3-201ENST00000338850 BRK1Q8WUW1 75 aa6.37□□□□□ -1.39
RTN3-201ENST00000338850 KRTAP9-6A0A140TA67 174 aa6.36□□□□□ -1.39
RTN3-201ENST00000338850 IGLV7-43P04211 117 aa6.36□□□□□ -1.39
RTN3-201ENST00000338850 LOC101927531A0A1B0GV80 90 aa6.35□□□□□ -1.39
RTN3-201ENST00000338850 Q8N9P0 234 aaPredicted RBP6.34□□□□□ -1.39
RTN3-201ENST00000338850 UBR4Q5T4S7 5183 aa6.33□□□□□ -1.4
RTN3-201ENST00000338850 PRR4Q16378 134 aa6.32□□□□□ -1.4
RTN3-201ENST00000338850 KRTAP13-3Q3SY46 172 aa6.32□□□□□ -1.4
RTN3-201ENST00000338850 COA5Q86WW8 74 aa6.32□□□□□ -1.4
RTN3-201ENST00000338850 LRP1Q07954 4544 aaKnown RBP6.31□□□□□ -1.4
RTN3-201ENST00000338850 IGHV6-1A0A0B4J1U7 121 aa6.31□□□□□ -1.4
RTN3-201ENST00000338850 Q5VV11 94 aa6.3□□□□□ -1.4
RTN3-201ENST00000338850 Q75L30 129 aa6.29□□□□□ -1.4
RTN3-201ENST00000338850 FAT3Q8TDW7 4589 aa6.28□□□□□ -1.4
RTN3-201ENST00000338850 LINC01558Q9Y6Z2 57 aa6.27□□□□□ -1.41
RTN3-201ENST00000338850 PKHD1L1Q86WI1 4243 aa6.26□□□□□ -1.41
RTN3-201ENST00000338850 A8MUN3 132 aa6.26□□□□□ -1.41
RTN3-201ENST00000338850 HMCN2Q8NDA2 5059 aa6.26□□□□□ -1.41
RTN3-201ENST00000338850 PSPHP1O15172 72 aa6.25□□□□□ -1.41
RTN3-201ENST00000338850 NDUFS5O43920 106 aa6.24□□□□□ -1.41
RTN3-201ENST00000338850 A0A087X002 238 aa6.22□□□□□ -1.41
RTN3-201ENST00000338850 PCOTHQ58A44 107 aa6.22□□□□□ -1.41
RTN3-201ENST00000338850 NOTCH2NLQ7Z3S9 236 aa6.22□□□□□ -1.41
RTN3-201ENST00000338850 MT1HL1P0DM35 61 aa6.21□□□□□ -1.42
RTN3-201ENST00000338850 HRES1P13985 223 aa6.21□□□□□ -1.42
RTN3-201ENST00000338850 PRR15LQ9BU68 103 aa6.2□□□□□ -1.42
RTN3-201ENST00000338850 ANAPC11Q9NYG5 84 aa6.2□□□□□ -1.42
RTN3-201ENST00000338850 PRR26Q8N8Z3 221 aa6.19□□□□□ -1.42
RTN3-201ENST00000338850 DMAC1Q96GE9 116 aa6.19□□□□□ -1.42
RTN3-201ENST00000338850 CHKB-CPT1BH3BT56 60 aa6.18□□□□□ -1.42
RTN3-201ENST00000338850 LINC00313P59037 77 aa6.18□□□□□ -1.42
RTN3-201ENST00000338850 LCE3BQ5TA77 95 aa6.18□□□□□ -1.42
RTN3-201ENST00000338850 ACYP2P14621 99 aa6.17□□□□□ -1.42
RTN3-201ENST00000338850 RPS29P62273 56 aaKnown RBP6.17□□□□□ -1.42
RTN3-201ENST00000338850 Q5W150 140 aa6.17□□□□□ -1.42
RTN3-201ENST00000338850 KRTAP13-2Q52LG2 175 aa6.16□□□□□ -1.42
RTN3-201ENST00000338850 SPINK6Q6UWN8 80 aa6.16□□□□□ -1.42
RTN3-201ENST00000338850 ATP11AUNQ6ZP68 121 aa6.16□□□□□ -1.42
RTN3-201ENST00000338850 CDC42SE1Q9NRR8 79 aa6.16□□□□□ -1.42
RTN3-201ENST00000338850 KRTAP16-1A8MUX0 517 aa6.15□□□□□ -1.42
RTN3-201ENST00000338850 IGKV2-30P06310 120 aa6.15□□□□□ -1.42
RTN3-201ENST00000338850 KRTAP1-4P0C5Y4 121 aa6.14□□□□□ -1.43
RTN3-201ENST00000338850 LCE2CQ5TA81 110 aa6.13□□□□□ -1.43
RTN3-201ENST00000338850 PMAIP1Q13794 54 aa6.12□□□□□ -1.43
RTN3-201ENST00000338850 KRTAP4-8A0A0G2JLE6 195 aa6.11□□□□□ -1.43
RTN3-201ENST00000338850 A6NED7 52 aa6.11□□□□□ -1.43
RTN3-201ENST00000338850 SPINK1P00995 79 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms