RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 C21orf62-AS1Q17RA5 79 aa6.13□□□□□ -1.43
SLC28A1-202ENST00000338602 PCOTHQ58A44 107 aa6.13□□□□□ -1.43
SLC28A1-202ENST00000338602 VPS25Q9BRG1 176 aa6.13□□□□□ -1.43
SLC28A1-202ENST00000338602 RPL37P61927 97 aaKnown RBP6.12□□□□□ -1.43
SLC28A1-202ENST00000338602 ACYP1P07311 99 aa6.11□□□□□ -1.43
SLC28A1-202ENST00000338602 SIGMAR1Q99720 223 aa6.11□□□□□ -1.43
SLC28A1-202ENST00000338602 FAM240AA0A1B0GVK7 77 aa6.1□□□□□ -1.43
SLC28A1-202ENST00000338602 LINC00846Q9NV44 126 aa6.09□□□□□ -1.43
SLC28A1-202ENST00000338602 IGKV4-1P06312 121 aa6.08□□□□□ -1.44
SLC28A1-202ENST00000338602 Q96NJ1 140 aa6.08□□□□□ -1.44
SLC28A1-202ENST00000338602 ATP11AUNQ6ZP68 121 aa6.07□□□□□ -1.44
SLC28A1-202ENST00000338602 Q75L30 129 aa6.06□□□□□ -1.44
SLC28A1-202ENST00000338602 KRTAP4-1Q9BYQ7 146 aa6.06□□□□□ -1.44
SLC28A1-202ENST00000338602 A0A1B0GW54 56 aa6.06□□□□□ -1.44
SLC28A1-202ENST00000338602 LINC00313P59037 77 aa6.05□□□□□ -1.44
SLC28A1-202ENST00000338602 LINC00472Q9H8W2 130 aa6.05□□□□□ -1.44
SLC28A1-202ENST00000338602 J3KT08 172 aa6.04□□□□□ -1.44
SLC28A1-202ENST00000338602 DEFB116Q30KQ4 102 aa6.04□□□□□ -1.44
SLC28A1-202ENST00000338602 DSCR10P59022 87 aa6.03□□□□□ -1.44
SLC28A1-202ENST00000338602 Q6ZVQ6 151 aa6.02□□□□□ -1.45
SLC28A1-202ENST00000338602 UBL5Q9BZL1 73 aa6.02□□□□□ -1.45
SLC28A1-202ENST00000338602 MT-ATP8P03928 68 aa6.01□□□□□ -1.45
SLC28A1-202ENST00000338602 LINC00643Q86TS7 51 aa6.01□□□□□ -1.45
SLC28A1-202ENST00000338602 C20orf166-AS1Q96NR2 134 aa6.01□□□□□ -1.45
SLC28A1-202ENST00000338602 IGHV6-1A0A0B4J1U7 121 aa6□□□□□ -1.45
SLC28A1-202ENST00000338602 KRTAP9-7A8MTY7 169 aa6□□□□□ -1.45
SLC28A1-202ENST00000338602 A8MUU9 505 aa6□□□□□ -1.45
SLC28A1-202ENST00000338602 NDUFB1O75438 58 aa6□□□□□ -1.45
SLC28A1-202ENST00000338602 NREPQ16612 68 aa6□□□□□ -1.45
SLC28A1-202ENST00000338602 C8orf87E5RJ46 101 aa5.99□□□□□ -1.45
SLC28A1-202ENST00000338602 IGKV3D-7A0A0C4DH55 119 aa5.98□□□□□ -1.45
SLC28A1-202ENST00000338602 A0A1B0GVX0 72 aa5.98□□□□□ -1.45
SLC28A1-202ENST00000338602 COX6B2Q6YFQ2 88 aa5.94□□□□□ -1.46
SLC28A1-202ENST00000338602 KRTAP16-1A8MUX0 517 aa5.93□□□□□ -1.46
SLC28A1-202ENST00000338602 A8MWP4 228 aa5.93□□□□□ -1.46
SLC28A1-202ENST00000338602 BPY2O14599 106 aa5.93□□□□□ -1.46
SLC28A1-202ENST00000338602 ATP5EP2Q5VTU8 51 aa5.93□□□□□ -1.46
SLC28A1-202ENST00000338602 NOTCH2NLQ7Z3S9 236 aa5.93□□□□□ -1.46
SLC28A1-202ENST00000338602 CXCL6P80162 114 aa5.92□□□□□ -1.46
SLC28A1-202ENST00000338602 HIST1H4AP62805 103 aaKnown RBP5.89□□□□□ -1.47
SLC28A1-202ENST00000338602 KRTAP19-2Q3LHN2 52 aa5.89□□□□□ -1.47
SLC28A1-202ENST00000338602 LCE2CQ5TA81 110 aa5.89□□□□□ -1.47
SLC28A1-202ENST00000338602 Q8N9L7 120 aa5.89□□□□□ -1.47
SLC28A1-202ENST00000338602 IMUPQ9GZP8 106 aa5.89□□□□□ -1.47
SLC28A1-202ENST00000338602 C8orf17Q9NRJ1 99 aa5.88□□□□□ -1.47
SLC28A1-202ENST00000338602 A0A087WVE0 104 aa5.87□□□□□ -1.47
SLC28A1-202ENST00000338602 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.87□□□□□ -1.47
SLC28A1-202ENST00000338602 PRR15Q8IV56 129 aa5.87□□□□□ -1.47
SLC28A1-202ENST00000338602 K7EQZ3 153 aa5.84□□□□□ -1.47
SLC28A1-202ENST00000338602 M0R2T5 61 aa5.84□□□□□ -1.47
SLC28A1-202ENST00000338602 MT1HP80294 61 aa5.84□□□□□ -1.47
SLC28A1-202ENST00000338602 Q8N9P0 234 aaPredicted RBP5.83□□□□□ -1.48
SLC28A1-202ENST00000338602 ZCCHC13Q8WW36 166 aaKnown RBP5.83□□□□□ -1.48
SLC28A1-202ENST00000338602 FAM236AA0A1B0GUQ0 79 aa5.8□□□□□ -1.48
SLC28A1-202ENST00000338602 FAM236BA0A1B0GV22 79 aa5.8□□□□□ -1.48
SLC28A1-202ENST00000338602 SCGB1A1P11684 91 aa5.8□□□□□ -1.48
SLC28A1-202ENST00000338602 TMEM254Q8TBM7 123 aa5.8□□□□□ -1.48
SLC28A1-202ENST00000338602 MRPL34Q9BQ48 92 aaKnown RBP5.8□□□□□ -1.48
SLC28A1-202ENST00000338602 RBM12B-AS1Q9P1G2 102 aa5.8□□□□□ -1.48
SLC28A1-202ENST00000338602 MMP24-AS1A0A0U1RRL7 71 aa5.8□□□□□ -1.48
SLC28A1-202ENST00000338602 FAM236DA0A1B0GTK5 79 aa5.8□□□□□ -1.48
SLC28A1-202ENST00000338602 hDV103S1A0JD37 113 aa5.8□□□□□ -1.48
SLC28A1-202ENST00000338602 FAM236CP0DP71 79 aa5.8□□□□□ -1.48
SLC28A1-202ENST00000338602 FLGP20930 4061 aaPredicted RBP5.78□□□□□ -1.48
SLC28A1-202ENST00000338602 NDUFS5O43920 106 aa5.78□□□□□ -1.48
SLC28A1-202ENST00000338602 HCG22E2RYF7 251 aa5.76□□□□□ -1.49
SLC28A1-202ENST00000338602 SPINK7P58062 85 aa5.76□□□□□ -1.49
SLC28A1-202ENST00000338602 WFDC13Q8IUB5 93 aa5.76□□□□□ -1.49
SLC28A1-202ENST00000338602 HRES1P13985 223 aa5.74□□□□□ -1.49
SLC28A1-202ENST00000338602 CASC2Q6XLA1 102 aa5.74□□□□□ -1.49
SLC28A1-202ENST00000338602 KRTAP10-6P60371 365 aaPredicted RBP5.72□□□□□ -1.49
SLC28A1-202ENST00000338602 ATOX1O00244 68 aa5.71□□□□□ -1.5
SLC28A1-202ENST00000338602 MPLKIPQ8TAP9 179 aa5.71□□□□□ -1.5
SLC28A1-202ENST00000338602 ANAPC13Q9BS18 74 aa5.7□□□□□ -1.5
SLC28A1-202ENST00000338602 SYNE2Q8WXH0 6885 aaKnown RBP5.7□□□□□ -1.5
SLC28A1-202ENST00000338602 LORP23490 312 aaPredicted RBP5.69□□□□□ -1.5
SLC28A1-202ENST00000338602 PCP4P48539 62 aa5.67□□□□□ -1.5
SLC28A1-202ENST00000338602 TRAV7A0A075B6U4 112 aa5.67□□□□□ -1.5
SLC28A1-202ENST00000338602 OCR1Q9BZK8 76 aa5.67□□□□□ -1.5
SLC28A1-202ENST00000338602 SMIM20Q8N5G0 67 aa5.66□□□□□ -1.5
SLC28A1-202ENST00000338602 SERP2Q8N6R1 65 aa5.66□□□□□ -1.5
SLC28A1-202ENST00000338602 SSPOA2VEC9 5147 aa5.64□□□□□ -1.51
SLC28A1-202ENST00000338602 IGKV2D-30A0A075B6S6 120 aa5.64□□□□□ -1.51
SLC28A1-202ENST00000338602 IGKV2-30P06310 120 aa5.64□□□□□ -1.51
SLC28A1-202ENST00000338602 C7orf65Q6ZTY9 151 aa5.64□□□□□ -1.51
SLC28A1-202ENST00000338602 SVIPQ8NHG7 77 aa5.64□□□□□ -1.51
SLC28A1-202ENST00000338602 COX7CP15954 63 aa5.63□□□□□ -1.51
SLC28A1-202ENST00000338602 USH2AO75445 5202 aa5.63□□□□□ -1.51
SLC28A1-202ENST00000338602 Q5W150 140 aa5.62□□□□□ -1.51
SLC28A1-202ENST00000338602 FCGBPQ9Y6R7 5405 aaPredicted RBP5.61□□□□□ -1.51
SLC28A1-202ENST00000338602 MACF1Q9UPN3 7388 aaKnown RBP5.61□□□□□ -1.51
SLC28A1-202ENST00000338602 CCDC179H3BU77 68 aa5.61□□□□□ -1.51
SLC28A1-202ENST00000338602 TP53AIP1Q9HCN2 124 aa5.61□□□□□ -1.51
SLC28A1-202ENST00000338602 UQCRQO14949 82 aa5.6□□□□□ -1.51
SLC28A1-202ENST00000338602 C5orf47Q569G3 176 aa5.56□□□□□ -1.52
SLC28A1-202ENST00000338602 C20orf197Q8N268 126 aa5.56□□□□□ -1.52
SLC28A1-202ENST00000338602 H0Y9P7 68 aa5.55□□□□□ -1.52
SLC28A1-202ENST00000338602 H1FX-AS1Q4G0G2 97 aa5.55□□□□□ -1.52
SLC28A1-202ENST00000338602 TRAV22A0A0B4J277 110 aa5.54□□□□□ -1.52
SLC28A1-202ENST00000338602 MP68P56378 58 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms