RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 FAT1Q14517 4588 aa13.68□□□□□ -0.22
CLPTM1-201ENST00000337392 SPINK6Q6UWN8 80 aa13.66□□□□□ -0.22
CLPTM1-201ENST00000337392 A0A087X002 238 aa13.65□□□□□ -0.22
CLPTM1-201ENST00000337392 A8MUN3 132 aa13.64□□□□□ -0.23
CLPTM1-201ENST00000337392 KRTAP21-3Q3LHN1 58 aa13.64□□□□□ -0.23
CLPTM1-201ENST00000337392 NOTCH2NLQ7Z3S9 236 aa13.64□□□□□ -0.23
CLPTM1-201ENST00000337392 RBM12B-AS1Q9P1G2 102 aa13.63□□□□□ -0.23
CLPTM1-201ENST00000337392 IGHV6-1A0A0B4J1U7 121 aa13.62□□□□□ -0.23
CLPTM1-201ENST00000337392 MMP24-AS1A0A0U1RRL7 71 aa13.62□□□□□ -0.23
CLPTM1-201ENST00000337392 Q6ZSA8 131 aa13.62□□□□□ -0.23
CLPTM1-201ENST00000337392 PRR4Q16378 134 aa13.62□□□□□ -0.23
CLPTM1-201ENST00000337392 LCE6AA0A183 80 aa13.6□□□□□ -0.23
CLPTM1-201ENST00000337392 KTN1-AS1Q86SY8 53 aa13.56□□□□□ -0.24
CLPTM1-201ENST00000337392 ZCCHC13Q8WW36 166 aaKnown RBP13.56□□□□□ -0.24
CLPTM1-201ENST00000337392 RYR2Q92736 4967 aa13.56□□□□□ -0.24
CLPTM1-201ENST00000337392 Q5VV11 94 aa13.56□□□□□ -0.24
CLPTM1-201ENST00000337392 LINC00208Q96KT6 92 aa13.56□□□□□ -0.24
CLPTM1-201ENST00000337392 NDUFB1O75438 58 aa13.54□□□□□ -0.24
CLPTM1-201ENST00000337392 KRTAP13-2Q52LG2 175 aa13.54□□□□□ -0.24
CLPTM1-201ENST00000337392 H0Y9P7 68 aa13.49□□□□□ -0.25
CLPTM1-201ENST00000337392 CYP4F30PQ9H0H9 118 aa13.49□□□□□ -0.25
CLPTM1-201ENST00000337392 C8orf17Q9NRJ1 99 aa13.49□□□□□ -0.25
CLPTM1-201ENST00000337392 APOBP04114 4563 aaKnown RBP13.48□□□□□ -0.25
CLPTM1-201ENST00000337392 SMR3BP02814 79 aaPredicted RBP13.48□□□□□ -0.25
CLPTM1-201ENST00000337392 A0A1B0GVX0 72 aa13.47□□□□□ -0.25
CLPTM1-201ENST00000337392 NDUFS5O43920 106 aa13.46□□□□□ -0.25
CLPTM1-201ENST00000337392 CDK2AP2O75956 126 aa13.43□□□□□ -0.26
CLPTM1-201ENST00000337392 MP68P56378 58 aa13.43□□□□□ -0.26
CLPTM1-201ENST00000337392 KRTAP1-4P0C5Y4 121 aa13.43□□□□□ -0.26
CLPTM1-201ENST00000337392 SPTSSBQ8NFR3 76 aa13.43□□□□□ -0.26
CLPTM1-201ENST00000337392 CHKB-CPT1BH3BT56 60 aa13.42□□□□□ -0.26
CLPTM1-201ENST00000337392 LCA10Q71F78 164 aa13.37□□□□□ -0.27
CLPTM1-201ENST00000337392 ASB16-AS1Q495Z4 193 aa13.36□□□□□ -0.27
CLPTM1-201ENST00000337392 SSBP3-AS1Q7Z2R9 100 aa13.35□□□□□ -0.27
CLPTM1-201ENST00000337392 C4orf48Q5BLP8 95 aa13.35□□□□□ -0.27
CLPTM1-201ENST00000337392 Q8N9P0 234 aaPredicted RBP13.35□□□□□ -0.27
CLPTM1-201ENST00000337392 RYR3Q15413 4870 aa13.34□□□□□ -0.27
CLPTM1-201ENST00000337392 A6NN06 94 aa13.34□□□□□ -0.27
CLPTM1-201ENST00000337392 PLA2G1BP04054 148 aaKnown RBP13.34□□□□□ -0.27
CLPTM1-201ENST00000337392 PCOTHQ58A44 107 aa13.33□□□□□ -0.28
CLPTM1-201ENST00000337392 PRR15LQ9BU68 103 aa13.31□□□□□ -0.28
CLPTM1-201ENST00000337392 MRPL34Q9BQ48 92 aaKnown RBP13.31□□□□□ -0.28
CLPTM1-201ENST00000337392 ATP11AUNQ6ZP68 121 aa13.3□□□□□ -0.28
CLPTM1-201ENST00000337392 RETNLBQ9BQ08 111 aa13.26□□□□□ -0.29
CLPTM1-201ENST00000337392 Q5W150 140 aa13.26□□□□□ -0.29
CLPTM1-201ENST00000337392 LIMD2Q9BT23 127 aa13.26□□□□□ -0.29
CLPTM1-201ENST00000337392 PRR26Q8N8Z3 221 aa13.25□□□□□ -0.29
CLPTM1-201ENST00000337392 A0A1B0GVY2 172 aa13.21□□□□□ -0.29
CLPTM1-201ENST00000337392 A6NED7 52 aa13.21□□□□□ -0.3
CLPTM1-201ENST00000337392 TYMSOSQ8TAI1 123 aa13.21□□□□□ -0.3
CLPTM1-201ENST00000337392 Q75L30 129 aa13.2□□□□□ -0.3
CLPTM1-201ENST00000337392 LRP1Q07954 4544 aaKnown RBP13.19□□□□□ -0.3
CLPTM1-201ENST00000337392 C7orf65Q6ZTY9 151 aa13.17□□□□□ -0.3
CLPTM1-201ENST00000337392 C8orf87E5RJ46 101 aa13.16□□□□□ -0.3
CLPTM1-201ENST00000337392 TP53AIP1Q9HCN2 124 aa13.16□□□□□ -0.3
CLPTM1-201ENST00000337392 PKHD1L1Q86WI1 4243 aa13.15□□□□□ -0.3
CLPTM1-201ENST00000337392 LINC00313P59037 77 aa13.13□□□□□ -0.31
CLPTM1-201ENST00000337392 LOC101927531A0A1B0GV80 90 aa13.11□□□□□ -0.31
CLPTM1-201ENST00000337392 H3BPC8 53 aa13.11□□□□□ -0.31
CLPTM1-201ENST00000337392 CDC42SE1Q9NRR8 79 aa13.11□□□□□ -0.31
CLPTM1-201ENST00000337392 SPANXA2-OT1Q8N9U9 137 aa13.09□□□□□ -0.31
CLPTM1-201ENST00000337392 HSPG2P98160 4391 aa13.06□□□□□ -0.32
CLPTM1-201ENST00000337392 KRTAP13-3Q3SY46 172 aa13.05□□□□□ -0.32
CLPTM1-201ENST00000337392 KRTAP10-4P60372 401 aaPredicted RBP13.04□□□□□ -0.32
CLPTM1-201ENST00000337392 COA5Q86WW8 74 aa13□□□□□ -0.33
CLPTM1-201ENST00000337392 KRTAP16-1A8MUX0 517 aa13□□□□□ -0.33
CLPTM1-201ENST00000337392 LINC00304Q8N9R0 145 aa13□□□□□ -0.33
CLPTM1-201ENST00000337392 IGLV7-46A0A075B6I9 117 aa12.98□□□□□ -0.33
CLPTM1-201ENST00000337392 FLG2Q5D862 2391 aaPredicted RBP12.98□□□□□ -0.33
CLPTM1-201ENST00000337392 H3BS24 57 aa12.97□□□□□ -0.33
CLPTM1-201ENST00000337392 SPINK1P00995 79 aa12.96□□□□□ -0.33
CLPTM1-201ENST00000337392 MYCBP2O75592 4640 aa12.95□□□□□ -0.34
CLPTM1-201ENST00000337392 KIAA1109Q2LD37 5005 aa12.95□□□□□ -0.34
CLPTM1-201ENST00000337392 SPINK7P58062 85 aa12.92□□□□□ -0.34
CLPTM1-201ENST00000337392 PRAC1Q96KF2 57 aa12.91□□□□□ -0.34
CLPTM1-201ENST00000337392 TNXBP22105 4242 aa12.89□□□□□ -0.35
CLPTM1-201ENST00000337392 SPAG11AQ6PDA7 123 aa12.89□□□□□ -0.35
CLPTM1-201ENST00000337392 LINC01558Q9Y6Z2 57 aa12.88□□□□□ -0.35
CLPTM1-201ENST00000337392 C9orf92A6NGG3 77 aa12.88□□□□□ -0.35
CLPTM1-201ENST00000337392 RYR1P21817 5038 aa12.87□□□□□ -0.35
CLPTM1-201ENST00000337392 EPPK1P58107 5090 aaKnown RBP12.87□□□□□ -0.35
CLPTM1-201ENST00000337392 DMBT1Q9UGM3 2413 aaPredicted RBP12.84□□□□□ -0.35
CLPTM1-201ENST00000337392 IGKV2D-30A0A075B6S6 120 aa12.84□□□□□ -0.35
CLPTM1-201ENST00000337392 IGKV2-30P06310 120 aa12.84□□□□□ -0.35
CLPTM1-201ENST00000337392 HRES1P13985 223 aa12.84□□□□□ -0.35
CLPTM1-201ENST00000337392 FAM229AH3BQW9 127 aa12.82□□□□□ -0.36
CLPTM1-201ENST00000337392 KRTAP17-1Q9BYP8 105 aa12.82□□□□□ -0.36
CLPTM1-201ENST00000337392 ADM2Q7Z4H4 148 aa12.8□□□□□ -0.36
CLPTM1-201ENST00000337392 FAT3Q8TDW7 4589 aa12.78□□□□□ -0.36
CLPTM1-201ENST00000337392 LINC01554Q52M75 96 aa12.73□□□□□ -0.37
CLPTM1-201ENST00000337392 Q5VSD8 79 aa12.68□□□□□ -0.38
CLPTM1-201ENST00000337392 Q8N1X5 172 aa12.68□□□□□ -0.38
CLPTM1-201ENST00000337392 RPS29P62273 56 aaKnown RBP12.63□□□□□ -0.39
CLPTM1-201ENST00000337392 DMAC1Q96GE9 116 aa12.57□□□□□ -0.4
CLPTM1-201ENST00000337392 ACYP2P14621 99 aa12.54□□□□□ -0.4
CLPTM1-201ENST00000337392 ABCA13Q86UQ4 5058 aa12.44□□□□□ -0.42
CLPTM1-201ENST00000337392 KRTAP10-8P60410 259 aa12.44□□□□□ -0.42
CLPTM1-201ENST00000337392 A8MUU9 505 aa12.44□□□□□ -0.42
CLPTM1-201ENST00000337392 C20orf166-AS1Q96NR2 134 aa12.44□□□□□ -0.42
CLPTM1-201ENST00000337392 LPAP08519 4548 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms