RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 A0A1B0GU69 56 aa5.5□□□□□ -1.53
FNDC3B-201ENST00000336824 KRTAP13-1Q8IUC0 172 aa5.49□□□□□ -1.53
FNDC3B-201ENST00000336824 PKD1L1Q8TDX9 2849 aa5.49□□□□□ -1.53
FNDC3B-201ENST00000336824 MMP24-AS1A0A0U1RRL7 71 aa5.48□□□□□ -1.53
FNDC3B-201ENST00000336824 SEC61BP60468 96 aaKnown RBP5.48□□□□□ -1.53
FNDC3B-201ENST00000336824 Q8N1X5 172 aa5.48□□□□□ -1.53
FNDC3B-201ENST00000336824 OCR1Q9BZK8 76 aa5.48□□□□□ -1.53
FNDC3B-201ENST00000336824 ASB16-AS1Q495Z4 193 aa5.47□□□□□ -1.53
FNDC3B-201ENST00000336824 SPANXA2-OT1Q8N9U9 137 aa5.47□□□□□ -1.53
FNDC3B-201ENST00000336824 ZCCHC13Q8WW36 166 aaKnown RBP5.47□□□□□ -1.53
FNDC3B-201ENST00000336824 FLG2Q5D862 2391 aaPredicted RBP5.46□□□□□ -1.54
FNDC3B-201ENST00000336824 RPS28P62857 69 aaKnown RBP5.46□□□□□ -1.54
FNDC3B-201ENST00000336824 TENM2Q9NT68 2774 aa5.45□□□□□ -1.54
FNDC3B-201ENST00000336824 A8MUN3 132 aa5.44□□□□□ -1.54
FNDC3B-201ENST00000336824 COA5Q86WW8 74 aa5.44□□□□□ -1.54
FNDC3B-201ENST00000336824 Q5XG85 94 aa5.42□□□□□ -1.54
FNDC3B-201ENST00000336824 H7BZZ5 65 aa5.4□□□□□ -1.54
FNDC3B-201ENST00000336824 PRO0628Q9UI54 55 aa5.39□□□□□ -1.55
FNDC3B-201ENST00000336824 KRTAP13-2Q52LG2 175 aa5.38□□□□□ -1.55
FNDC3B-201ENST00000336824 C4orf26Q17RF5 130 aa5.37□□□□□ -1.55
FNDC3B-201ENST00000336824 CYP4F30PQ9H0H9 118 aa5.37□□□□□ -1.55
FNDC3B-201ENST00000336824 Q5W150 140 aa5.35□□□□□ -1.55
FNDC3B-201ENST00000336824 SPINK7P58062 85 aa5.34□□□□□ -1.55
FNDC3B-201ENST00000336824 HRES1P13985 223 aa5.34□□□□□ -1.55
FNDC3B-201ENST00000336824 CUBNO60494 3623 aa5.34□□□□□ -1.56
FNDC3B-201ENST00000336824 A0A1B0GVY2 172 aa5.32□□□□□ -1.56
FNDC3B-201ENST00000336824 M0R2T5 61 aa5.3□□□□□ -1.56
FNDC3B-201ENST00000336824 UQCR11O14957 56 aa5.3□□□□□ -1.56
FNDC3B-201ENST00000336824 COL7A1Q02388 2944 aa5.29□□□□□ -1.56
FNDC3B-201ENST00000336824 Q75L30 129 aa5.29□□□□□ -1.56
FNDC3B-201ENST00000336824 KRTAP29-1A8MX34 341 aaPredicted RBP5.29□□□□□ -1.56
FNDC3B-201ENST00000336824 S4R3F8 94 aa5.28□□□□□ -1.56
FNDC3B-201ENST00000336824 LINC01554Q52M75 96 aa5.28□□□□□ -1.56
FNDC3B-201ENST00000336824 Q8N9P0 234 aaPredicted RBP5.27□□□□□ -1.57
FNDC3B-201ENST00000336824 KRTAP1-4P0C5Y4 121 aa5.27□□□□□ -1.57
FNDC3B-201ENST00000336824 CSAG1Q6PB30 78 aa5.27□□□□□ -1.57
FNDC3B-201ENST00000336824 CRIPTQ9P021 101 aa5.24□□□□□ -1.57
FNDC3B-201ENST00000336824 LUZP6Q538Z0 58 aa5.22□□□□□ -1.57
FNDC3B-201ENST00000336824 NOTCH2NLQ7Z3S9 236 aa5.21□□□□□ -1.57
FNDC3B-201ENST00000336824 RPL37P61927 97 aaKnown RBP5.21□□□□□ -1.58
FNDC3B-201ENST00000336824 MIR22HGQ0VDD5 57 aa5.2□□□□□ -1.58
FNDC3B-201ENST00000336824 HUWE1Q7Z6Z7 4374 aaKnown RBP5.2□□□□□ -1.58
FNDC3B-201ENST00000336824 DMAC1Q96GE9 116 aa5.18□□□□□ -1.58
FNDC3B-201ENST00000336824 A8MUU9 505 aa5.17□□□□□ -1.58
FNDC3B-201ENST00000336824 FBN3Q75N90 2809 aa5.16□□□□□ -1.58
FNDC3B-201ENST00000336824 C20orf166-AS1Q96NR2 134 aa5.16□□□□□ -1.58
FNDC3B-201ENST00000336824 H3BS24 57 aa5.15□□□□□ -1.58
FNDC3B-201ENST00000336824 Q1T7F1 81 aa5.15□□□□□ -1.58
FNDC3B-201ENST00000336824 TPRXLQ17RH7 258 aa5.14□□□□□ -1.59
FNDC3B-201ENST00000336824 A0A1B0GU33 70 aa5.13□□□□□ -1.59
FNDC3B-201ENST00000336824 H1FX-AS1Q4G0G2 97 aa5.12□□□□□ -1.59
FNDC3B-201ENST00000336824 MEGF8Q7Z7M0 2845 aa5.12□□□□□ -1.59
FNDC3B-201ENST00000336824 KTN1-AS1Q86SY8 53 aa5.1□□□□□ -1.59
FNDC3B-201ENST00000336824 LCA10Q71F78 164 aa5.1□□□□□ -1.59
FNDC3B-201ENST00000336824 KRTAP10-8P60410 259 aa5.1□□□□□ -1.59
FNDC3B-201ENST00000336824 ANK2Q01484 3957 aa5.1□□□□□ -1.59
FNDC3B-201ENST00000336824 ALMS1Q8TCU4 4167 aa5.09□□□□□ -1.59
FNDC3B-201ENST00000336824 A0A0D9SG42 100 aa5.09□□□□□ -1.6
FNDC3B-201ENST00000336824 LINC01558Q9Y6Z2 57 aa5.08□□□□□ -1.6
FNDC3B-201ENST00000336824 CYSTM1Q9H1C7 97 aa5.08□□□□□ -1.6
FNDC3B-201ENST00000336824 XP32Q5T750 250 aa5.08□□□□□ -1.6
FNDC3B-201ENST00000336824 R4GN34 69 aa5.07□□□□□ -1.6
FNDC3B-201ENST00000336824 DNAH9Q9NYC9 4486 aa5.05□□□□□ -1.6
FNDC3B-201ENST00000336824 CDC42SE1Q9NRR8 79 aa5.04□□□□□ -1.6
FNDC3B-201ENST00000336824 CAMK2N1Q7Z7J9 78 aa5.03□□□□□ -1.6
FNDC3B-201ENST00000336824 KRTAP13-3Q3SY46 172 aa5.02□□□□□ -1.61
FNDC3B-201ENST00000336824 CMYA5Q8N3K9 4069 aa5.01□□□□□ -1.61
FNDC3B-201ENST00000336824 A0A0A0MQY5 61 aa5.01□□□□□ -1.61
FNDC3B-201ENST00000336824 ADM2Q7Z4H4 148 aa4.99□□□□□ -1.61
FNDC3B-201ENST00000336824 KRTAP16-1A8MUX0 517 aa4.97□□□□□ -1.61
FNDC3B-201ENST00000336824 M0QZ58 72 aa4.96□□□□□ -1.62
FNDC3B-201ENST00000336824 DNAH3Q8TD57 4116 aa4.96□□□□□ -1.62
FNDC3B-201ENST00000336824 SRRM2Q9UQ35 2752 aaKnown RBP4.95□□□□□ -1.62
FNDC3B-201ENST00000336824 PRKDCP78527 4128 aaKnown RBP4.92□□□□□ -1.62
FNDC3B-201ENST00000336824 Q5VV11 94 aa4.92□□□□□ -1.62
FNDC3B-201ENST00000336824 PLAC4Q8WY50 150 aa4.91□□□□□ -1.62
FNDC3B-201ENST00000336824 CSMD3Q7Z407 3707 aa4.85□□□□□ -1.63
FNDC3B-201ENST00000336824 DNAH1Q9P2D7 4330 aa4.84□□□□□ -1.63
FNDC3B-201ENST00000336824 KRTAP10-4P60372 401 aaPredicted RBP4.81□□□□□ -1.64
FNDC3B-201ENST00000336824 SPATA8Q6RVD6 105 aa4.8□□□□□ -1.64
FNDC3B-201ENST00000336824 PRAC1Q96KF2 57 aa4.8□□□□□ -1.64
FNDC3B-201ENST00000336824 MT1HL1P0DM35 61 aa4.79□□□□□ -1.64
FNDC3B-201ENST00000336824 KMT2AQ03164 3969 aa4.79□□□□□ -1.64
FNDC3B-201ENST00000336824 VPS13DQ5THJ4 4388 aa4.78□□□□□ -1.64
FNDC3B-201ENST00000336824 DNAH6Q9C0G6 4158 aa4.78□□□□□ -1.64
FNDC3B-201ENST00000336824 DNAH7Q8WXX0 4024 aa4.76□□□□□ -1.65
FNDC3B-201ENST00000336824 PLECQ15149 4684 aaKnown RBP4.76□□□□□ -1.65
FNDC3B-201ENST00000336824 ROMO1P60602 79 aa4.75□□□□□ -1.65
FNDC3B-201ENST00000336824 STARD9Q9P2P6 4700 aa4.71□□□□□ -1.66
FNDC3B-201ENST00000336824 KRTAP4-5Q9BYR2 181 aa4.7□□□□□ -1.66
FNDC3B-201ENST00000336824 DYNC2H1Q8NCM8 4307 aaKnown RBP4.68□□□□□ -1.66
FNDC3B-201ENST00000336824 KRTAP10-10P60014 251 aa4.67□□□□□ -1.66
FNDC3B-201ENST00000336824 LYSTQ99698 3801 aa4.66□□□□□ -1.66
FNDC3B-201ENST00000336824 DNAH10Q8IVF4 4471 aa4.65□□□□□ -1.66
FNDC3B-201ENST00000336824 A8MU10 97 aa4.65□□□□□ -1.67
FNDC3B-201ENST00000336824 HECTD4Q9Y4D8 3996 aa4.62□□□□□ -1.67
FNDC3B-201ENST00000336824 FAT2Q9NYQ8 4349 aa4.62□□□□□ -1.67
FNDC3B-201ENST00000336824 DNHD1Q96M86 4753 aa4.62□□□□□ -1.67
FNDC3B-201ENST00000336824 DNAH17Q9UFH2 4485 aa4.61□□□□□ -1.67
FNDC3B-201ENST00000336824 DNAH2Q9P225 4427 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms