RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 C20orf197Q8N268 126 aa5.21□□□□□ -1.57
LSAMP-201ENST00000333617 ANAPC11Q9NYG5 84 aa5.21□□□□□ -1.57
LSAMP-201ENST00000333617 DYNC1H1Q14204 4646 aaKnown RBP5.21□□□□□ -1.57
LSAMP-201ENST00000333617 CYSTM1Q9H1C7 97 aa5.21□□□□□ -1.58
LSAMP-201ENST00000333617 LINC00472Q9H8W2 130 aa5.21□□□□□ -1.58
LSAMP-201ENST00000333617 HCG22E2RYF7 251 aa5.2□□□□□ -1.58
LSAMP-201ENST00000333617 OCR1Q9BZK8 76 aa5.2□□□□□ -1.58
LSAMP-201ENST00000333617 LCE6AA0A183 80 aa5.19□□□□□ -1.58
LSAMP-201ENST00000333617 HRCT1Q6UXD1 115 aa5.19□□□□□ -1.58
LSAMP-201ENST00000333617 KMT2CQ8NEZ4 4911 aaKnown RBP5.18□□□□□ -1.58
LSAMP-201ENST00000333617 J3KT08 172 aa5.18□□□□□ -1.58
LSAMP-201ENST00000333617 KRTAP10-7P60409 375 aaPredicted RBP5.18□□□□□ -1.58
LSAMP-201ENST00000333617 A8MWP4 228 aa5.17□□□□□ -1.58
LSAMP-201ENST00000333617 TMEM258P61165 79 aa5.17□□□□□ -1.58
LSAMP-201ENST00000333617 LINC00336Q6ZUF6 198 aa5.17□□□□□ -1.58
LSAMP-201ENST00000333617 KLKP1Q107X0 134 aa5.16□□□□□ -1.58
LSAMP-201ENST00000333617 PRR15Q8IV56 129 aa5.16□□□□□ -1.58
LSAMP-201ENST00000333617 SNURFQ9Y675 71 aa5.16□□□□□ -1.58
LSAMP-201ENST00000333617 NDUFB1O75438 58 aa5.15□□□□□ -1.59
LSAMP-201ENST00000333617 WFDC13Q8IUB5 93 aa5.15□□□□□ -1.59
LSAMP-201ENST00000333617 TMEM254Q8TBM7 123 aa5.15□□□□□ -1.59
LSAMP-201ENST00000333617 Q96NJ1 140 aa5.15□□□□□ -1.59
LSAMP-201ENST00000333617 APOBP04114 4563 aaKnown RBP5.14□□□□□ -1.59
LSAMP-201ENST00000333617 KRTAP5-4Q6L8H1 288 aa5.14□□□□□ -1.59
LSAMP-201ENST00000333617 SSBP3-AS1Q7Z2R9 100 aa5.14□□□□□ -1.59
LSAMP-201ENST00000333617 C5orf47Q569G3 176 aa5.13□□□□□ -1.59
LSAMP-201ENST00000333617 KRTAP29-1A8MX34 341 aaPredicted RBP5.12□□□□□ -1.59
LSAMP-201ENST00000333617 H7BZZ5 65 aa5.12□□□□□ -1.59
LSAMP-201ENST00000333617 NDUFC1O43677 76 aa5.12□□□□□ -1.59
LSAMP-201ENST00000333617 RPS28P62857 69 aaKnown RBP5.12□□□□□ -1.59
LSAMP-201ENST00000333617 CD164Q04900 197 aa5.12□□□□□ -1.59
LSAMP-201ENST00000333617 FAM229BQ4G0N7 80 aa5.12□□□□□ -1.59
LSAMP-201ENST00000333617 CASC2Q6XLA1 102 aa5.12□□□□□ -1.59
LSAMP-201ENST00000333617 A0A0U1RQV1 116 aa5.12□□□□□ -1.59
LSAMP-201ENST00000333617 RYR3Q15413 4870 aa5.11□□□□□ -1.59
LSAMP-201ENST00000333617 CDK2AP2O75956 126 aa5.11□□□□□ -1.59
LSAMP-201ENST00000333617 A0A087X002 238 aa5.1□□□□□ -1.59
LSAMP-201ENST00000333617 MMP24-AS1A0A0U1RRL7 71 aa5.1□□□□□ -1.59
LSAMP-201ENST00000333617 KRTAP5-1Q6L8H4 278 aa5.1□□□□□ -1.59
LSAMP-201ENST00000333617 FAM236DA0A1B0GTK5 79 aa5.09□□□□□ -1.59
LSAMP-201ENST00000333617 A0A1B0GVX0 72 aa5.09□□□□□ -1.59
LSAMP-201ENST00000333617 A0A1B0GVY2 172 aa5.09□□□□□ -1.59
LSAMP-201ENST00000333617 FAM236CP0DP71 79 aa5.09□□□□□ -1.59
LSAMP-201ENST00000333617 KRTAP13-2Q52LG2 175 aa5.09□□□□□ -1.59
LSAMP-201ENST00000333617 hDV103S1A0JD37 113 aa5.08□□□□□ -1.6
LSAMP-201ENST00000333617 PKHD1L1Q86WI1 4243 aa5.08□□□□□ -1.6
LSAMP-201ENST00000333617 IGHV6-1A0A0B4J1U7 121 aa5.08□□□□□ -1.6
LSAMP-201ENST00000333617 KRTAP1-4P0C5Y4 121 aa5.08□□□□□ -1.6
LSAMP-201ENST00000333617 C8orf17Q9NRJ1 99 aa5.08□□□□□ -1.6
LSAMP-201ENST00000333617 FAT1Q14517 4588 aa5.07□□□□□ -1.6
LSAMP-201ENST00000333617 ASB16-AS1Q495Z4 193 aa5.07□□□□□ -1.6
LSAMP-201ENST00000333617 SPINK6Q6UWN8 80 aa5.07□□□□□ -1.6
LSAMP-201ENST00000333617 MP68P56378 58 aa5.06□□□□□ -1.6
LSAMP-201ENST00000333617 ZCCHC13Q8WW36 166 aaKnown RBP5.05□□□□□ -1.6
LSAMP-201ENST00000333617 ATP5EP56381 51 aaPredicted RBP5.04□□□□□ -1.6
LSAMP-201ENST00000333617 Q5XG85 94 aa5.04□□□□□ -1.6
LSAMP-201ENST00000333617 H0Y9P7 68 aa5.04□□□□□ -1.6
LSAMP-201ENST00000333617 SMR3BP02814 79 aaPredicted RBP5.04□□□□□ -1.6
LSAMP-201ENST00000333617 TP53AIP1Q9HCN2 124 aa5.04□□□□□ -1.6
LSAMP-201ENST00000333617 H3BPC8 53 aa5.03□□□□□ -1.6
LSAMP-201ENST00000333617 TYMSOSQ8TAI1 123 aa5.03□□□□□ -1.6
LSAMP-201ENST00000333617 LIMD2Q9BT23 127 aa5.03□□□□□ -1.6
LSAMP-201ENST00000333617 LINC00208Q96KT6 92 aa5.02□□□□□ -1.61
LSAMP-201ENST00000333617 MRPL34Q9BQ48 92 aaKnown RBP5.02□□□□□ -1.61
LSAMP-201ENST00000333617 TRAV22A0A0B4J277 110 aa5.01□□□□□ -1.61
LSAMP-201ENST00000333617 NDUFS5O43920 106 aa5.01□□□□□ -1.61
LSAMP-201ENST00000333617 NOTCH2NLQ7Z3S9 236 aa5.01□□□□□ -1.61
LSAMP-201ENST00000333617 KRTAP4-4Q9BYR3 166 aa5.01□□□□□ -1.61
LSAMP-201ENST00000333617 SERP1Q9Y6X1 66 aa5.01□□□□□ -1.61
LSAMP-201ENST00000333617 C8orf87E5RJ46 101 aa5□□□□□ -1.61
LSAMP-201ENST00000333617 C1orf195Q5TG92 126 aa5□□□□□ -1.61
LSAMP-201ENST00000333617 SPINK1P00995 79 aa4.99□□□□□ -1.61
LSAMP-201ENST00000333617 OXTP01178 125 aa4.99□□□□□ -1.61
LSAMP-201ENST00000333617 C1orf64Q8NEQ6 169 aa4.99□□□□□ -1.61
LSAMP-201ENST00000333617 PRR26Q8N8Z3 221 aa4.98□□□□□ -1.61
LSAMP-201ENST00000333617 LINC00313P59037 77 aa4.97□□□□□ -1.61
LSAMP-201ENST00000333617 KRTAP10-4P60372 401 aaPredicted RBP4.97□□□□□ -1.61
LSAMP-201ENST00000333617 Q8N9P0 234 aaPredicted RBP4.97□□□□□ -1.61
LSAMP-201ENST00000333617 LINC00304Q8N9R0 145 aa4.97□□□□□ -1.61
LSAMP-201ENST00000333617 RYR1P21817 5038 aa4.96□□□□□ -1.62
LSAMP-201ENST00000333617 HSPG2P98160 4391 aa4.95□□□□□ -1.62
LSAMP-201ENST00000333617 SPAG11AQ6PDA7 123 aa4.95□□□□□ -1.62
LSAMP-201ENST00000333617 EPPK1P58107 5090 aaKnown RBP4.94□□□□□ -1.62
LSAMP-201ENST00000333617 RPS29P62273 56 aaKnown RBP4.94□□□□□ -1.62
LSAMP-201ENST00000333617 SPANXA2-OT1Q8N9U9 137 aa4.93□□□□□ -1.62
LSAMP-201ENST00000333617 CYP4F30PQ9H0H9 118 aa4.93□□□□□ -1.62
LSAMP-201ENST00000333617 LCE1AQ5T7P2 110 aa4.92□□□□□ -1.62
LSAMP-201ENST00000333617 PRR4Q16378 134 aa4.91□□□□□ -1.62
LSAMP-201ENST00000333617 TNXBP22105 4242 aa4.91□□□□□ -1.62
LSAMP-201ENST00000333617 SMIM26A0A096LP01 95 aa4.91□□□□□ -1.62
LSAMP-201ENST00000333617 KRTAP16-1A8MUX0 517 aa4.9□□□□□ -1.63
LSAMP-201ENST00000333617 PCOTHQ58A44 107 aa4.9□□□□□ -1.63
LSAMP-201ENST00000333617 Q5W150 140 aa4.9□□□□□ -1.63
LSAMP-201ENST00000333617 FAT3Q8TDW7 4589 aa4.89□□□□□ -1.63
LSAMP-201ENST00000333617 LOC101927531A0A1B0GV80 90 aa4.89□□□□□ -1.63
LSAMP-201ENST00000333617 KRTAP13-3Q3SY46 172 aa4.89□□□□□ -1.63
LSAMP-201ENST00000333617 BIRC6Q9NR09 4857 aa4.89□□□□□ -1.63
LSAMP-201ENST00000333617 LRP1Q07954 4544 aaKnown RBP4.89□□□□□ -1.63
LSAMP-201ENST00000333617 IGKV2-30P06310 120 aa4.88□□□□□ -1.63
LSAMP-201ENST00000333617 PRO0628Q9UI54 55 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms