RNA–Protein interactions for RNA: ENST00000332859.10

SUMO3-201, Transcript of small ubiquitin-like modifier 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO3, Length 1,807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-201ENST00000332859 SERP1Q9Y6X1 66 aa11.73□□□□□ -0.53
SUMO3-201ENST00000332859 TYMSOSQ8TAI1 123 aa11.72□□□□□ -0.53
SUMO3-201ENST00000332859 Q5VSD8 79 aa11.72□□□□□ -0.53
SUMO3-201ENST00000332859 FAT1Q14517 4588 aa11.71□□□□□ -0.53
SUMO3-201ENST00000332859 MP68P56378 58 aa11.7□□□□□ -0.54
SUMO3-201ENST00000332859 hDV103S1A0JD37 113 aa11.69□□□□□ -0.54
SUMO3-201ENST00000332859 A0A1B0GVX0 72 aa11.68□□□□□ -0.54
SUMO3-201ENST00000332859 ASB16-AS1Q495Z4 193 aa11.68□□□□□ -0.54
SUMO3-201ENST00000332859 PRR26Q8N8Z3 221 aa11.68□□□□□ -0.54
SUMO3-201ENST00000332859 RYR1P21817 5038 aa11.68□□□□□ -0.54
SUMO3-201ENST00000332859 H3BPC8 53 aa11.67□□□□□ -0.54
SUMO3-201ENST00000332859 OXTP01178 125 aa11.67□□□□□ -0.54
SUMO3-201ENST00000332859 C8orf17Q9NRJ1 99 aa11.67□□□□□ -0.54
SUMO3-201ENST00000332859 HSPG2P98160 4391 aa11.65□□□□□ -0.54
SUMO3-201ENST00000332859 C4orf48Q5BLP8 95 aa11.64□□□□□ -0.55
SUMO3-201ENST00000332859 PKHD1L1Q86WI1 4243 aa11.62□□□□□ -0.55
SUMO3-201ENST00000332859 IGHV6-1A0A0B4J1U7 121 aa11.61□□□□□ -0.55
SUMO3-201ENST00000332859 H0Y9P7 68 aa11.61□□□□□ -0.55
SUMO3-201ENST00000332859 Q5XG85 94 aa11.61□□□□□ -0.55
SUMO3-201ENST00000332859 TP53AIP1Q9HCN2 124 aa11.61□□□□□ -0.55
SUMO3-201ENST00000332859 LIMD2Q9BT23 127 aa11.6□□□□□ -0.55
SUMO3-201ENST00000332859 EPPK1P58107 5090 aaKnown RBP11.6□□□□□ -0.55
SUMO3-201ENST00000332859 SPINK1P00995 79 aa11.58□□□□□ -0.56
SUMO3-201ENST00000332859 Q8N1X5 172 aa11.58□□□□□ -0.56
SUMO3-201ENST00000332859 LINC00304Q8N9R0 145 aa11.58□□□□□ -0.56
SUMO3-201ENST00000332859 LINC00208Q96KT6 92 aa11.58□□□□□ -0.56
SUMO3-201ENST00000332859 SPAG11AQ6PDA7 123 aa11.57□□□□□ -0.56
SUMO3-201ENST00000332859 TRAV22A0A0B4J277 110 aa11.56□□□□□ -0.56
SUMO3-201ENST00000332859 MRPL34Q9BQ48 92 aaKnown RBP11.54□□□□□ -0.56
SUMO3-201ENST00000332859 KRTAP17-1Q9BYP8 105 aa11.53□□□□□ -0.56
SUMO3-201ENST00000332859 KIAA1109Q2LD37 5005 aa11.52□□□□□ -0.56
SUMO3-201ENST00000332859 RPS29P62273 56 aaKnown RBP11.52□□□□□ -0.57
SUMO3-201ENST00000332859 C8orf87E5RJ46 101 aa11.5□□□□□ -0.57
SUMO3-201ENST00000332859 C1orf64Q8NEQ6 169 aa11.5□□□□□ -0.57
SUMO3-201ENST00000332859 SMIM26A0A096LP01 95 aa11.49□□□□□ -0.57
SUMO3-201ENST00000332859 C1orf195Q5TG92 126 aa11.48□□□□□ -0.57
SUMO3-201ENST00000332859 CYP4F30PQ9H0H9 118 aa11.48□□□□□ -0.57
SUMO3-201ENST00000332859 NDUFS5O43920 106 aa11.46□□□□□ -0.57
SUMO3-201ENST00000332859 NOTCH2NLQ7Z3S9 236 aa11.46□□□□□ -0.57
SUMO3-201ENST00000332859 SPANXA2-OT1Q8N9U9 137 aa11.46□□□□□ -0.58
SUMO3-201ENST00000332859 KRTAP10-8P60410 259 aa11.41□□□□□ -0.58
SUMO3-201ENST00000332859 LINC00313P59037 77 aa11.37□□□□□ -0.59
SUMO3-201ENST00000332859 FP248Q71RG6 208 aaPredicted RBP11.35□□□□□ -0.59
SUMO3-201ENST00000332859 PRR4Q16378 134 aa11.33□□□□□ -0.6
SUMO3-201ENST00000332859 C4orf26Q17RF5 130 aa11.32□□□□□ -0.6
SUMO3-201ENST00000332859 IGLV7-46A0A075B6I9 117 aa11.3□□□□□ -0.6
SUMO3-201ENST00000332859 LOC101927531A0A1B0GV80 90 aa11.29□□□□□ -0.6
SUMO3-201ENST00000332859 KRTAP13-3Q3SY46 172 aa11.28□□□□□ -0.6
SUMO3-201ENST00000332859 Q8N9P0 234 aaPredicted RBP11.28□□□□□ -0.6
SUMO3-201ENST00000332859 FAT3Q8TDW7 4589 aa11.27□□□□□ -0.61
SUMO3-201ENST00000332859 LRP1Q07954 4544 aaKnown RBP11.27□□□□□ -0.61
SUMO3-201ENST00000332859 TNXBP22105 4242 aa11.25□□□□□ -0.61
SUMO3-201ENST00000332859 PCOTHQ58A44 107 aa11.25□□□□□ -0.61
SUMO3-201ENST00000332859 Q5W150 140 aa11.25□□□□□ -0.61
SUMO3-201ENST00000332859 BIRC6Q9NR09 4857 aa11.24□□□□□ -0.61
SUMO3-201ENST00000332859 MT1HL1P0DM35 61 aa11.24□□□□□ -0.61
SUMO3-201ENST00000332859 KRTAP4-5Q9BYR2 181 aa11.24□□□□□ -0.61
SUMO3-201ENST00000332859 KRTAP16-1A8MUX0 517 aa11.23□□□□□ -0.61
SUMO3-201ENST00000332859 FLG2Q5D862 2391 aaPredicted RBP11.2□□□□□ -0.62
SUMO3-201ENST00000332859 RETNLBQ9BQ08 111 aa11.2□□□□□ -0.62
SUMO3-201ENST00000332859 MPLKIPQ8TAP9 179 aa11.17□□□□□ -0.62
SUMO3-201ENST00000332859 Q1T7F1 81 aa11.16□□□□□ -0.62
SUMO3-201ENST00000332859 MYCBP2O75592 4640 aa11.12□□□□□ -0.63
SUMO3-201ENST00000332859 COA5Q86WW8 74 aa11.1□□□□□ -0.63
SUMO3-201ENST00000332859 SVIPQ8NHG7 77 aa11.1□□□□□ -0.63
SUMO3-201ENST00000332859 HERC2O95714 4834 aa11.1□□□□□ -0.63
SUMO3-201ENST00000332859 V9GYY9 64 aa11.09□□□□□ -0.63
SUMO3-201ENST00000332859 IGKV2-30P06310 120 aa11.07□□□□□ -0.64
SUMO3-201ENST00000332859 C9orf92A6NGG3 77 aa11.05□□□□□ -0.64
SUMO3-201ENST00000332859 ABCA13Q86UQ4 5058 aa11.01□□□□□ -0.65
SUMO3-201ENST00000332859 DMBT1Q9UGM3 2413 aaPredicted RBP11□□□□□ -0.65
SUMO3-201ENST00000332859 HRES1P13985 223 aa11□□□□□ -0.65
SUMO3-201ENST00000332859 J3QL48 77 aa10.95□□□□□ -0.66
SUMO3-201ENST00000332859 C20orf166-AS1Q96NR2 134 aa10.95□□□□□ -0.66
SUMO3-201ENST00000332859 ACYP2P14621 99 aa10.95□□□□□ -0.66
SUMO3-201ENST00000332859 A8MUU9 505 aa10.94□□□□□ -0.66
SUMO3-201ENST00000332859 DMAC1Q96GE9 116 aa10.94□□□□□ -0.66
SUMO3-201ENST00000332859 IGKV2D-30A0A075B6S6 120 aa10.9□□□□□ -0.66
SUMO3-201ENST00000332859 PSPHP1O15172 72 aa10.89□□□□□ -0.67
SUMO3-201ENST00000332859 Q75L30 129 aa10.86□□□□□ -0.67
SUMO3-201ENST00000332859 A8MUN3 132 aa10.86□□□□□ -0.67
SUMO3-201ENST00000332859 PRO0628Q9UI54 55 aa10.85□□□□□ -0.67
SUMO3-201ENST00000332859 C7orf65Q6ZTY9 151 aa10.84□□□□□ -0.67
SUMO3-201ENST00000332859 BRK1Q8WUW1 75 aa10.82□□□□□ -0.68
SUMO3-201ENST00000332859 LINC01558Q9Y6Z2 57 aa10.82□□□□□ -0.68
SUMO3-201ENST00000332859 Q5VV11 94 aa10.81□□□□□ -0.68
SUMO3-201ENST00000332859 PRR15LQ9BU68 103 aa10.81□□□□□ -0.68
SUMO3-201ENST00000332859 XP32Q5T750 250 aa10.8□□□□□ -0.68
SUMO3-201ENST00000332859 TPRXLQ17RH7 258 aa10.79□□□□□ -0.68
SUMO3-201ENST00000332859 CHKB-CPT1BH3BT56 60 aa10.78□□□□□ -0.68
SUMO3-201ENST00000332859 RPL37P61927 97 aaKnown RBP10.76□□□□□ -0.69
SUMO3-201ENST00000332859 ATP11AUNQ6ZP68 121 aa10.72□□□□□ -0.69
SUMO3-201ENST00000332859 PCLOQ9Y6V0 5065 aa10.62□□□□□ -0.71
SUMO3-201ENST00000332859 SPINK7P58062 85 aa10.59□□□□□ -0.71
SUMO3-201ENST00000332859 A6NED7 52 aa10.57□□□□□ -0.72
SUMO3-201ENST00000332859 A0A1B0GU69 56 aa10.49□□□□□ -0.73
SUMO3-201ENST00000332859 CDC42SE1Q9NRR8 79 aa10.48□□□□□ -0.73
SUMO3-201ENST00000332859 SPTSSBQ8NFR3 76 aa10.47□□□□□ -0.73
SUMO3-201ENST00000332859 LPAP08519 4548 aa10.46□□□□□ -0.73
SUMO3-201ENST00000332859 LCA10Q71F78 164 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms