RNA–Protein interactions for RNA: ENST00000332556.4

LAMP1-201, Transcript of lysosomal associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMP1, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-201ENST00000332556 KRTAP10-2P60368 255 aa11.39□□□□□ -0.59
LAMP1-201ENST00000332556 Q96NJ1 140 aa11.39□□□□□ -0.59
LAMP1-201ENST00000332556 CD164Q04900 197 aa11.38□□□□□ -0.59
LAMP1-201ENST00000332556 LIMD2Q9BT23 127 aa11.38□□□□□ -0.59
LAMP1-201ENST00000332556 WWC2-AS2Q96NR7 200 aa11.37□□□□□ -0.59
LAMP1-201ENST00000332556 NDUFS5O43920 106 aa11.37□□□□□ -0.59
LAMP1-201ENST00000332556 IGLV7-46A0A075B6I9 117 aa11.35□□□□□ -0.59
LAMP1-201ENST00000332556 IGHV6-1A0A0B4J1U7 121 aa11.35□□□□□ -0.59
LAMP1-201ENST00000332556 SPTSSBQ8NFR3 76 aa11.34□□□□□ -0.59
LAMP1-201ENST00000332556 PLAC8Q9NZF1 115 aa11.34□□□□□ -0.59
LAMP1-201ENST00000332556 ZNF861PO60384 105 aa11.33□□□□□ -0.6
LAMP1-201ENST00000332556 SPINK6Q6UWN8 80 aa11.33□□□□□ -0.6
LAMP1-201ENST00000332556 A0A087X002 238 aa11.32□□□□□ -0.6
LAMP1-201ENST00000332556 NOTCH2NLQ7Z3S9 236 aa11.32□□□□□ -0.6
LAMP1-201ENST00000332556 C8orf17Q9NRJ1 99 aa11.32□□□□□ -0.6
LAMP1-201ENST00000332556 LRP1BQ9NZR2 4599 aa11.32□□□□□ -0.6
LAMP1-201ENST00000332556 SPAG11AQ6PDA7 123 aa11.31□□□□□ -0.6
LAMP1-201ENST00000332556 A6NED7 52 aa11.31□□□□□ -0.6
LAMP1-201ENST00000332556 LCA10Q71F78 164 aa11.3□□□□□ -0.6
LAMP1-201ENST00000332556 LINC00483Q53H64 154 aa11.29□□□□□ -0.6
LAMP1-201ENST00000332556 CIRBP-AS1Q8TBR5 109 aa11.29□□□□□ -0.6
LAMP1-201ENST00000332556 ASB16-AS1Q495Z4 193 aa11.27□□□□□ -0.6
LAMP1-201ENST00000332556 PKD1P98161 4303 aa11.25□□□□□ -0.61
LAMP1-201ENST00000332556 IGLV7-43P04211 117 aa11.25□□□□□ -0.61
LAMP1-201ENST00000332556 Q75L30 129 aa11.25□□□□□ -0.61
LAMP1-201ENST00000332556 TP53AIP1Q9HCN2 124 aa11.25□□□□□ -0.61
LAMP1-201ENST00000332556 A0A1B0GVX0 72 aa11.23□□□□□ -0.61
LAMP1-201ENST00000332556 LOC101927531A0A1B0GV80 90 aa11.22□□□□□ -0.61
LAMP1-201ENST00000332556 ZNF706Q9Y5V0 76 aaPredicted RBP11.22□□□□□ -0.61
LAMP1-201ENST00000332556 FAT2Q9NYQ8 4349 aa11.22□□□□□ -0.61
LAMP1-201ENST00000332556 CDK2AP2O75956 126 aa11.21□□□□□ -0.61
LAMP1-201ENST00000332556 HRES1P13985 223 aa11.2□□□□□ -0.62
LAMP1-201ENST00000332556 KRTAP10-1P60331 282 aa11.19□□□□□ -0.62
LAMP1-201ENST00000332556 MRPL34Q9BQ48 92 aaKnown RBP11.19□□□□□ -0.62
LAMP1-201ENST00000332556 PKHD1P08F94 4074 aa11.16□□□□□ -0.62
LAMP1-201ENST00000332556 VPS13BQ7Z7G8 4022 aa11.16□□□□□ -0.62
LAMP1-201ENST00000332556 LINC01558Q9Y6Z2 57 aa11.14□□□□□ -0.63
LAMP1-201ENST00000332556 SPINK7P58062 85 aa11.13□□□□□ -0.63
LAMP1-201ENST00000332556 Q5W150 140 aa11.12□□□□□ -0.63
LAMP1-201ENST00000332556 ATP11AUNQ6ZP68 121 aa11.12□□□□□ -0.63
LAMP1-201ENST00000332556 PRR26Q8N8Z3 221 aa11.11□□□□□ -0.63
LAMP1-201ENST00000332556 CDC42SE1Q9NRR8 79 aa11.1□□□□□ -0.63
LAMP1-201ENST00000332556 KTN1-AS1Q86SY8 53 aa11.09□□□□□ -0.63
LAMP1-201ENST00000332556 RETNLBQ9BQ08 111 aa11.09□□□□□ -0.63
LAMP1-201ENST00000332556 A6NN06 94 aa11.06□□□□□ -0.64
LAMP1-201ENST00000332556 KRTAP13-2Q52LG2 175 aa11.06□□□□□ -0.64
LAMP1-201ENST00000332556 SACSQ9NZJ4 4579 aa10.98□□□□□ -0.65
LAMP1-201ENST00000332556 KRTAP13-3Q3SY46 172 aa10.98□□□□□ -0.65
LAMP1-201ENST00000332556 RBM12B-AS1Q9P1G2 102 aa10.98□□□□□ -0.65
LAMP1-201ENST00000332556 Q6ZSA8 131 aa10.95□□□□□ -0.66
LAMP1-201ENST00000332556 SMR3BP02814 79 aaPredicted RBP10.92□□□□□ -0.66
LAMP1-201ENST00000332556 SSBP3-AS1Q7Z2R9 100 aa10.92□□□□□ -0.66
LAMP1-201ENST00000332556 KRTAP1-4P0C5Y4 121 aa10.9□□□□□ -0.66
LAMP1-201ENST00000332556 FAT1Q14517 4588 aa10.9□□□□□ -0.66
LAMP1-201ENST00000332556 ACYP2P14621 99 aa10.89□□□□□ -0.67
LAMP1-201ENST00000332556 PLA2G1BP04054 148 aaKnown RBP10.86□□□□□ -0.67
LAMP1-201ENST00000332556 C7orf65Q6ZTY9 151 aa10.86□□□□□ -0.67
LAMP1-201ENST00000332556 DYNC1H1Q14204 4646 aaKnown RBP10.85□□□□□ -0.67
LAMP1-201ENST00000332556 LINC00313P59037 77 aa10.85□□□□□ -0.67
LAMP1-201ENST00000332556 DMAC1Q96GE9 116 aa10.81□□□□□ -0.68
LAMP1-201ENST00000332556 C8orf87E5RJ46 101 aa10.78□□□□□ -0.68
LAMP1-201ENST00000332556 TYMSOSQ8TAI1 123 aa10.78□□□□□ -0.68
LAMP1-201ENST00000332556 PRAC1Q96KF2 57 aa10.75□□□□□ -0.69
LAMP1-201ENST00000332556 A0A1B0GU69 56 aa10.75□□□□□ -0.69
LAMP1-201ENST00000332556 FAM229AH3BQW9 127 aa10.75□□□□□ -0.69
LAMP1-201ENST00000332556 KMT2CQ8NEZ4 4911 aaKnown RBP10.74□□□□□ -0.69
LAMP1-201ENST00000332556 IGKV2-30P06310 120 aa10.72□□□□□ -0.69
LAMP1-201ENST00000332556 ADM2Q7Z4H4 148 aa10.72□□□□□ -0.69
LAMP1-201ENST00000332556 IGKV2D-30A0A075B6S6 120 aa10.71□□□□□ -0.69
LAMP1-201ENST00000332556 KRTAP16-1A8MUX0 517 aa10.69□□□□□ -0.7
LAMP1-201ENST00000332556 APOBP04114 4563 aaKnown RBP10.66□□□□□ -0.7
LAMP1-201ENST00000332556 C9orf92A6NGG3 77 aa10.6□□□□□ -0.71
LAMP1-201ENST00000332556 RYR2Q92736 4967 aa10.59□□□□□ -0.71
LAMP1-201ENST00000332556 MIR22HGQ0VDD5 57 aa10.59□□□□□ -0.71
LAMP1-201ENST00000332556 SPATA8Q6RVD6 105 aa10.59□□□□□ -0.71
LAMP1-201ENST00000332556 LINC00304Q8N9R0 145 aa10.59□□□□□ -0.71
LAMP1-201ENST00000332556 SPINK1P00995 79 aa10.56□□□□□ -0.72
LAMP1-201ENST00000332556 UQCR11O14957 56 aa10.55□□□□□ -0.72
LAMP1-201ENST00000332556 LRP1Q07954 4544 aaKnown RBP10.53□□□□□ -0.72
LAMP1-201ENST00000332556 A0A1B0GVY2 172 aa10.51□□□□□ -0.73
LAMP1-201ENST00000332556 Q8N1X5 172 aa10.51□□□□□ -0.73
LAMP1-201ENST00000332556 J3QL48 77 aa10.5□□□□□ -0.73
LAMP1-201ENST00000332556 KRTAP21-3Q3LHN1 58 aa10.49□□□□□ -0.73
LAMP1-201ENST00000332556 PKHD1L1Q86WI1 4243 aa10.47□□□□□ -0.73
LAMP1-201ENST00000332556 KRTAP10-4P60372 401 aaPredicted RBP10.46□□□□□ -0.74
LAMP1-201ENST00000332556 FLG2Q5D862 2391 aaPredicted RBP10.39□□□□□ -0.75
LAMP1-201ENST00000332556 RYR3Q15413 4870 aa10.38□□□□□ -0.75
LAMP1-201ENST00000332556 LINC01554Q52M75 96 aa10.34□□□□□ -0.75
LAMP1-201ENST00000332556 CSAG1Q6PB30 78 aa10.33□□□□□ -0.76
LAMP1-201ENST00000332556 MYCBP2O75592 4640 aa10.33□□□□□ -0.76
LAMP1-201ENST00000332556 DMBT1Q9UGM3 2413 aaPredicted RBP10.32□□□□□ -0.76
LAMP1-201ENST00000332556 HSPG2P98160 4391 aa10.28□□□□□ -0.76
LAMP1-201ENST00000332556 KRTAP17-1Q9BYP8 105 aa10.24□□□□□ -0.77
LAMP1-201ENST00000332556 TNXBP22105 4242 aa10.23□□□□□ -0.77
LAMP1-201ENST00000332556 FAT3Q8TDW7 4589 aa10.23□□□□□ -0.77
LAMP1-201ENST00000332556 RPS29P62273 56 aaKnown RBP10.22□□□□□ -0.77
LAMP1-201ENST00000332556 H0YAA0 97 aa10.21□□□□□ -0.77
LAMP1-201ENST00000332556 KIAA1109Q2LD37 5005 aa10.2□□□□□ -0.78
LAMP1-201ENST00000332556 A8MUU9 505 aa10.17□□□□□ -0.78
LAMP1-201ENST00000332556 C20orf166-AS1Q96NR2 134 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms