RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 IGFL1Q6UW32 110 aa9.66□□□□□ -0.86
RAB28-202ENST00000330852 CCKP06307 115 aa9.65□□□□□ -0.87
RAB28-202ENST00000330852 LINC00846Q9NV44 126 aa9.65□□□□□ -0.87
RAB28-202ENST00000330852 FAM236AA0A1B0GUQ0 79 aa9.61□□□□□ -0.87
RAB28-202ENST00000330852 FAM236BA0A1B0GV22 79 aa9.61□□□□□ -0.87
RAB28-202ENST00000330852 CCDC179H3BU77 68 aa9.6□□□□□ -0.87
RAB28-202ENST00000330852 HIST1H4AP62805 103 aaKnown RBP9.59□□□□□ -0.87
RAB28-202ENST00000330852 H3BQ85 93 aa9.57□□□□□ -0.88
RAB28-202ENST00000330852 LOC110117498A0A087WWA1 95 aa9.56□□□□□ -0.88
RAB28-202ENST00000330852 COX6B2Q6YFQ2 88 aa9.56□□□□□ -0.88
RAB28-202ENST00000330852 Q6ZQT0 140 aa9.55□□□□□ -0.88
RAB28-202ENST00000330852 Q75L30 129 aa9.55□□□□□ -0.88
RAB28-202ENST00000330852 SS18L2Q9UHA2 77 aa9.55□□□□□ -0.88
RAB28-202ENST00000330852 GHRHP01286 108 aa9.53□□□□□ -0.88
RAB28-202ENST00000330852 RBM3P98179 157 aaKnown RBP9.53□□□□□ -0.88
RAB28-202ENST00000330852 ATP11AUNQ6ZP68 121 aa9.53□□□□□ -0.88
RAB28-202ENST00000330852 LORP23490 312 aaPredicted RBP9.53□□□□□ -0.88
RAB28-202ENST00000330852 IGKV3D-7A0A0C4DH55 119 aa9.52□□□□□ -0.89
RAB28-202ENST00000330852 KRTAP10-6P60371 365 aaPredicted RBP9.51□□□□□ -0.89
RAB28-202ENST00000330852 CRCT1Q9UGL9 99 aa9.51□□□□□ -0.89
RAB28-202ENST00000330852 M0R2T5 61 aa9.51□□□□□ -0.89
RAB28-202ENST00000330852 ATP5EP2Q5VTU8 51 aa9.51□□□□□ -0.89
RAB28-202ENST00000330852 TRBV7-4A0A0J9YYF1 115 aa9.48□□□□□ -0.89
RAB28-202ENST00000330852 PDE6GP18545 87 aa9.48□□□□□ -0.89
RAB28-202ENST00000330852 ATOX1O00244 68 aa9.46□□□□□ -0.89
RAB28-202ENST00000330852 DSCR8Q96T75 97 aa9.45□□□□□ -0.9
RAB28-202ENST00000330852 A0A087WVE0 104 aa9.45□□□□□ -0.9
RAB28-202ENST00000330852 UQCRQO14949 82 aa9.45□□□□□ -0.9
RAB28-202ENST00000330852 Q96NJ1 140 aa9.45□□□□□ -0.9
RAB28-202ENST00000330852 UBL5Q9BZL1 73 aa9.45□□□□□ -0.9
RAB28-202ENST00000330852 COX7CP15954 63 aa9.43□□□□□ -0.9
RAB28-202ENST00000330852 C20orf166-AS1Q96NR2 134 aa9.42□□□□□ -0.9
RAB28-202ENST00000330852 A0A087WSZ3 146 aa9.41□□□□□ -0.9
RAB28-202ENST00000330852 FLGP20930 4061 aaPredicted RBP9.41□□□□□ -0.9
RAB28-202ENST00000330852 Q6ZVQ6 151 aa9.4□□□□□ -0.9
RAB28-202ENST00000330852 FSIP2Q5CZC0 6907 aa9.4□□□□□ -0.9
RAB28-202ENST00000330852 A8MUU9 505 aa9.39□□□□□ -0.91
RAB28-202ENST00000330852 SERP2Q8N6R1 65 aa9.36□□□□□ -0.91
RAB28-202ENST00000330852 CXCL6P80162 114 aa9.34□□□□□ -0.91
RAB28-202ENST00000330852 A0A1W2PNM2 257 aa9.33□□□□□ -0.92
RAB28-202ENST00000330852 DSCR10P59022 87 aa9.28□□□□□ -0.92
RAB28-202ENST00000330852 LINC00313P59037 77 aa9.28□□□□□ -0.92
RAB28-202ENST00000330852 CYSTM1Q9H1C7 97 aa9.28□□□□□ -0.92
RAB28-202ENST00000330852 IGKV4-1P06312 121 aa9.26□□□□□ -0.93
RAB28-202ENST00000330852 A0A1B0GW54 56 aa9.23□□□□□ -0.93
RAB28-202ENST00000330852 LINC00472Q9H8W2 130 aa9.22□□□□□ -0.93
RAB28-202ENST00000330852 KRTAP16-1A8MUX0 517 aa9.21□□□□□ -0.94
RAB28-202ENST00000330852 TRAV7A0A075B6U4 112 aa9.2□□□□□ -0.94
RAB28-202ENST00000330852 SMIM20Q8N5G0 67 aa9.19□□□□□ -0.94
RAB28-202ENST00000330852 NREPQ16612 68 aa9.19□□□□□ -0.94
RAB28-202ENST00000330852 TMEM258P61165 79 aa9.17□□□□□ -0.94
RAB28-202ENST00000330852 KRTAP3-3Q9BYR6 98 aa9.16□□□□□ -0.94
RAB28-202ENST00000330852 KRTAP3-2Q9BYR7 98 aa9.16□□□□□ -0.94
RAB28-202ENST00000330852 KRTAP9-8Q9BYQ0 159 aa9.14□□□□□ -0.95
RAB28-202ENST00000330852 BPY2O14599 106 aa9.14□□□□□ -0.95
RAB28-202ENST00000330852 DEFB116Q30KQ4 102 aa9.14□□□□□ -0.95
RAB28-202ENST00000330852 NOTCH2NLQ7Z3S9 236 aa9.14□□□□□ -0.95
RAB28-202ENST00000330852 IGHV6-1A0A0B4J1U7 121 aa9.13□□□□□ -0.95
RAB28-202ENST00000330852 C8orf87E5RJ46 101 aa9.13□□□□□ -0.95
RAB28-202ENST00000330852 Q8N9L7 120 aa9.13□□□□□ -0.95
RAB28-202ENST00000330852 RBM12B-AS1Q9P1G2 102 aa9.13□□□□□ -0.95
RAB28-202ENST00000330852 FAM236DA0A1B0GTK5 79 aa9.12□□□□□ -0.95
RAB28-202ENST00000330852 FAM236CP0DP71 79 aa9.12□□□□□ -0.95
RAB28-202ENST00000330852 C20orf197Q8N268 126 aa9.12□□□□□ -0.95
RAB28-202ENST00000330852 KLKP1Q107X0 134 aa9.11□□□□□ -0.95
RAB28-202ENST00000330852 RPS28P62857 69 aaKnown RBP9.1□□□□□ -0.95
RAB28-202ENST00000330852 MPLKIPQ8TAP9 179 aa9.1□□□□□ -0.95
RAB28-202ENST00000330852 A0A1B0GVX0 72 aa9.09□□□□□ -0.95
RAB28-202ENST00000330852 J3KT08 172 aa9.08□□□□□ -0.96
RAB28-202ENST00000330852 HRES1P13985 223 aa9.08□□□□□ -0.96
RAB28-202ENST00000330852 H7BZZ5 65 aa9.07□□□□□ -0.96
RAB28-202ENST00000330852 OCR1Q9BZK8 76 aa9.06□□□□□ -0.96
RAB28-202ENST00000330852 NDUFB1O75438 58 aa9□□□□□ -0.97
RAB28-202ENST00000330852 SNURFQ9Y675 71 aa9□□□□□ -0.97
RAB28-202ENST00000330852 ZCCHC13Q8WW36 166 aaKnown RBP9□□□□□ -0.97
RAB28-202ENST00000330852 MT2AP02795 61 aa8.99□□□□□ -0.97
RAB28-202ENST00000330852 K7EQZ3 153 aa8.98□□□□□ -0.97
RAB28-202ENST00000330852 TMEM254Q8TBM7 123 aa8.98□□□□□ -0.97
RAB28-202ENST00000330852 NDUFC1O43677 76 aa8.97□□□□□ -0.97
RAB28-202ENST00000330852 Q8N9P0 234 aaPredicted RBP8.96□□□□□ -0.98
RAB28-202ENST00000330852 SPINK7P58062 85 aa8.94□□□□□ -0.98
RAB28-202ENST00000330852 A8MWP4 228 aa8.91□□□□□ -0.98
RAB28-202ENST00000330852 HCG22E2RYF7 251 aa8.9□□□□□ -0.98
RAB28-202ENST00000330852 MT1FP04733 61 aa8.9□□□□□ -0.98
RAB28-202ENST00000330852 C8orf17Q9NRJ1 99 aa8.9□□□□□ -0.98
RAB28-202ENST00000330852 KRTAP10-10P60014 251 aa8.89□□□□□ -0.99
RAB28-202ENST00000330852 SERP1Q9Y6X1 66 aa8.89□□□□□ -0.99
RAB28-202ENST00000330852 USH2AO75445 5202 aa8.88□□□□□ -0.99
RAB28-202ENST00000330852 ATP5EP56381 51 aaPredicted RBP8.87□□□□□ -0.99
RAB28-202ENST00000330852 SVIPQ8NHG7 77 aa8.86□□□□□ -0.99
RAB28-202ENST00000330852 KRTAP9-3Q9BYQ3 159 aa8.86□□□□□ -0.99
RAB28-202ENST00000330852 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.85□□□□□ -0.99
RAB28-202ENST00000330852 SSPOA2VEC9 5147 aa8.84□□□□□ -1
RAB28-202ENST00000330852 LCE2BO14633 110 aa8.83□□□□□ -1
RAB28-202ENST00000330852 PRR15Q8IV56 129 aa8.82□□□□□ -1
RAB28-202ENST00000330852 C5orf47Q569G3 176 aa8.8□□□□□ -1
RAB28-202ENST00000330852 WFDC13Q8IUB5 93 aa8.8□□□□□ -1
RAB28-202ENST00000330852 KRTAP9-7A8MTY7 169 aa8.79□□□□□ -1
RAB28-202ENST00000330852 MRPL34Q9BQ48 92 aaKnown RBP8.76□□□□□ -1.01
RAB28-202ENST00000330852 CASC2Q6XLA1 102 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms