RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 SS18L2Q9UHA2 77 aa7.7□□□□□ -1.18
CTHRC1-201ENST00000330295 TMEM256-PLSCR3K7ERE1 68 aa7.69□□□□□ -1.18
CTHRC1-201ENST00000330295 MT1FP04733 61 aa7.68□□□□□ -1.18
CTHRC1-201ENST00000330295 RPL37P61927 97 aaKnown RBP7.68□□□□□ -1.18
CTHRC1-201ENST00000330295 TEN1Q86WV5 123 aa7.68□□□□□ -1.18
CTHRC1-201ENST00000330295 LST1O00453 97 aa7.67□□□□□ -1.18
CTHRC1-201ENST00000330295 MUC12Q9UKN1 5478 aa7.67□□□□□ -1.18
CTHRC1-201ENST00000330295 TSTD3H0UI37 97 aa7.66□□□□□ -1.18
CTHRC1-201ENST00000330295 TRACP01848 142 aa7.65□□□□□ -1.18
CTHRC1-201ENST00000330295 ANKRD29Q8N6D5 301 aa7.64□□□□□ -1.19
CTHRC1-201ENST00000330295 UBE2V1Q13404 147 aa7.62□□□□□ -1.19
CTHRC1-201ENST00000330295 A0A087WSZ3 146 aa7.6□□□□□ -1.19
CTHRC1-201ENST00000330295 KRTAP10-10P60014 251 aa7.6□□□□□ -1.19
CTHRC1-201ENST00000330295 LYRM7Q5U5X0 104 aa7.59□□□□□ -1.19
CTHRC1-201ENST00000330295 ATXN8Q156A1 80 aa7.58□□□□□ -1.2
CTHRC1-201ENST00000330295 TRBV7-4A0A0J9YYF1 115 aa7.57□□□□□ -1.2
CTHRC1-201ENST00000330295 A0A1B0GV72 72 aa7.57□□□□□ -1.2
CTHRC1-201ENST00000330295 BAALC-AS2P0C853 105 aa7.56□□□□□ -1.2
CTHRC1-201ENST00000330295 RBM3P98179 157 aaKnown RBP7.56□□□□□ -1.2
CTHRC1-201ENST00000330295 DSCR8Q96T75 97 aa7.56□□□□□ -1.2
CTHRC1-201ENST00000330295 A0A1W2PNM2 257 aa7.55□□□□□ -1.2
CTHRC1-201ENST00000330295 CCKP06307 115 aa7.55□□□□□ -1.2
CTHRC1-201ENST00000330295 BATFQ16520 125 aa7.55□□□□□ -1.2
CTHRC1-201ENST00000330295 LOC105371267A0A1B0GV96 52 aa7.53□□□□□ -1.2
CTHRC1-201ENST00000330295 C21orf62-AS1Q17RA5 79 aa7.53□□□□□ -1.2
CTHRC1-201ENST00000330295 OBSCN-AS1Q96MR7 158 aa7.53□□□□□ -1.2
CTHRC1-201ENST00000330295 TRBV20-1A0A075B6N2 111 aa7.51□□□□□ -1.21
CTHRC1-201ENST00000330295 C9JAW5 83 aa7.51□□□□□ -1.21
CTHRC1-201ENST00000330295 NAA38Q9BRA0 125 aaKnown RBP7.51□□□□□ -1.21
CTHRC1-201ENST00000330295 VPS25Q9BRG1 176 aa7.51□□□□□ -1.21
CTHRC1-201ENST00000330295 SIGMAR1Q99720 223 aa7.5□□□□□ -1.21
CTHRC1-201ENST00000330295 JMJD7-PLA2G4BH0Y9G9 81 aa7.49□□□□□ -1.21
CTHRC1-201ENST00000330295 ATP11AUNQ6ZP68 121 aa7.49□□□□□ -1.21
CTHRC1-201ENST00000330295 Q96NJ1 140 aa7.49□□□□□ -1.21
CTHRC1-201ENST00000330295 IGKV4-1P06312 121 aa7.48□□□□□ -1.21
CTHRC1-201ENST00000330295 Q75L30 129 aa7.47□□□□□ -1.21
CTHRC1-201ENST00000330295 PDE6GP18545 87 aa7.46□□□□□ -1.22
CTHRC1-201ENST00000330295 C9orf118A6NHY6 69 aa7.43□□□□□ -1.22
CTHRC1-201ENST00000330295 LINC00313P59037 77 aa7.43□□□□□ -1.22
CTHRC1-201ENST00000330295 A0A1B0GW54 56 aa7.42□□□□□ -1.22
CTHRC1-201ENST00000330295 LINC00472Q9H8W2 130 aa7.42□□□□□ -1.22
CTHRC1-201ENST00000330295 J3KT08 172 aa7.41□□□□□ -1.22
CTHRC1-201ENST00000330295 LOC110117498A0A087WWA1 95 aa7.4□□□□□ -1.22
CTHRC1-201ENST00000330295 KRTAP2-3P0C7H8 128 aa7.4□□□□□ -1.22
CTHRC1-201ENST00000330295 DSCR10P59022 87 aa7.4□□□□□ -1.22
CTHRC1-201ENST00000330295 KRTAP2-4Q9BYR9 128 aa7.4□□□□□ -1.22
CTHRC1-201ENST00000330295 A0A1W2PPM0 123 aa7.39□□□□□ -1.23
CTHRC1-201ENST00000330295 DEFB116Q30KQ4 102 aa7.39□□□□□ -1.23
CTHRC1-201ENST00000330295 C20orf166-AS1Q96NR2 134 aa7.39□□□□□ -1.23
CTHRC1-201ENST00000330295 TAX1BP3O14907 124 aa7.38□□□□□ -1.23
CTHRC1-201ENST00000330295 Q6ZQT0 140 aa7.38□□□□□ -1.23
CTHRC1-201ENST00000330295 IGHV6-1A0A0B4J1U7 121 aa7.37□□□□□ -1.23
CTHRC1-201ENST00000330295 A8MUU9 505 aa7.37□□□□□ -1.23
CTHRC1-201ENST00000330295 H3BT86 120 aa7.37□□□□□ -1.23
CTHRC1-201ENST00000330295 NDUFB1O75438 58 aa7.37□□□□□ -1.23
CTHRC1-201ENST00000330295 C8orf87E5RJ46 101 aa7.36□□□□□ -1.23
CTHRC1-201ENST00000330295 C14orf132Q9NPU4 83 aa7.36□□□□□ -1.23
CTHRC1-201ENST00000330295 KMT2DO14686 5537 aa7.34□□□□□ -1.23
CTHRC1-201ENST00000330295 COL5A1-AS1Q5SY13 56 aa7.34□□□□□ -1.23
CTHRC1-201ENST00000330295 A0A1B0GVX0 72 aa7.33□□□□□ -1.24
CTHRC1-201ENST00000330295 SPCS1Q9Y6A9 102 aa7.32□□□□□ -1.24
CTHRC1-201ENST00000330295 NREPQ16612 68 aa7.31□□□□□ -1.24
CTHRC1-201ENST00000330295 MDN1Q9NU22 5596 aa7.31□□□□□ -1.24
CTHRC1-201ENST00000330295 KRTAP16-1A8MUX0 517 aa7.27□□□□□ -1.25
CTHRC1-201ENST00000330295 A8MWP4 228 aa7.27□□□□□ -1.25
CTHRC1-201ENST00000330295 NOTCH2NLQ7Z3S9 236 aa7.27□□□□□ -1.25
CTHRC1-201ENST00000330295 MTURNQ8N3F0 131 aa7.27□□□□□ -1.25
CTHRC1-201ENST00000330295 KRTAP5-9P26371 169 aa7.26□□□□□ -1.25
CTHRC1-201ENST00000330295 FAM236DA0A1B0GTK5 79 aa7.25□□□□□ -1.25
CTHRC1-201ENST00000330295 FAM236CP0DP71 79 aa7.25□□□□□ -1.25
CTHRC1-201ENST00000330295 C8orf17Q9NRJ1 99 aa7.21□□□□□ -1.26
CTHRC1-201ENST00000330295 IGKV3D-7A0A0C4DH55 119 aa7.2□□□□□ -1.26
CTHRC1-201ENST00000330295 PCP4L1A6NKN8 68 aa7.2□□□□□ -1.26
CTHRC1-201ENST00000330295 GTF2H5Q6ZYL4 71 aa7.2□□□□□ -1.26
CTHRC1-201ENST00000330295 K7EP34 96 aa7.19□□□□□ -1.26
CTHRC1-201ENST00000330295 PRR15Q8IV56 129 aa7.19□□□□□ -1.26
CTHRC1-201ENST00000330295 BPY2O14599 106 aa7.18□□□□□ -1.26
CTHRC1-201ENST00000330295 Q6ZVQ6 151 aa7.17□□□□□ -1.26
CTHRC1-201ENST00000330295 ZCCHC13Q8WW36 166 aaKnown RBP7.17□□□□□ -1.26
CTHRC1-201ENST00000330295 RBM12B-AS1Q9P1G2 102 aa7.17□□□□□ -1.26
CTHRC1-201ENST00000330295 Q8N9P0 234 aaPredicted RBP7.16□□□□□ -1.26
CTHRC1-201ENST00000330295 UBL5Q9BZL1 73 aa7.13□□□□□ -1.27
CTHRC1-201ENST00000330295 GPR98Q8WXG9 6306 aa7.13□□□□□ -1.27
CTHRC1-201ENST00000330295 TMEM254Q8TBM7 123 aa7.12□□□□□ -1.27
CTHRC1-201ENST00000330295 PRO0461Q9UI25 63 aa7.12□□□□□ -1.27
CTHRC1-201ENST00000330295 hDV103S1A0JD37 113 aa7.11□□□□□ -1.27
CTHRC1-201ENST00000330295 F8W1H4 67 aa7.11□□□□□ -1.27
CTHRC1-201ENST00000330295 K7EQZ3 153 aa7.11□□□□□ -1.27
CTHRC1-201ENST00000330295 MRPL34Q9BQ48 92 aaKnown RBP7.11□□□□□ -1.27
CTHRC1-201ENST00000330295 KRTAP2-2Q9BYT5 123 aa7.11□□□□□ -1.27
CTHRC1-201ENST00000330295 KRTAP2-1Q9BYU5 128 aa7.11□□□□□ -1.27
CTHRC1-201ENST00000330295 MMP24-AS1A0A0U1RRL7 71 aa7.09□□□□□ -1.27
CTHRC1-201ENST00000330295 NDUFS5O43920 106 aa7.09□□□□□ -1.27
CTHRC1-201ENST00000330295 A6NN06 94 aa7.08□□□□□ -1.28
CTHRC1-201ENST00000330295 SPINK7P58062 85 aa7.08□□□□□ -1.28
CTHRC1-201ENST00000330295 MPLKIPQ8TAP9 179 aa7.08□□□□□ -1.28
CTHRC1-201ENST00000330295 HRES1P13985 223 aa7.06□□□□□ -1.28
CTHRC1-201ENST00000330295 CASC2Q6XLA1 102 aa7.04□□□□□ -1.28
CTHRC1-201ENST00000330295 ETDBQ3ZM63 59 aa7.02□□□□□ -1.29
CTHRC1-201ENST00000330295 WFDC13Q8IUB5 93 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 209 ms