RNA–Protein interactions for RNA: ENST00000328933.9

SYNGR1-203, Transcript of synaptogyrin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR1, Length 4,391 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-203ENST00000328933 SPINK7P58062 85 aa8.39□□□□□ -1.07
SYNGR1-203ENST00000328933 MMP24-AS1A0A0U1RRL7 71 aa8.38□□□□□ -1.07
SYNGR1-203ENST00000328933 CUBNO60494 3623 aa8.36□□□□□ -1.07
SYNGR1-203ENST00000328933 LINC01600Q96MT4 127 aa8.35□□□□□ -1.07
SYNGR1-203ENST00000328933 KRTAP13-2Q52LG2 175 aa8.35□□□□□ -1.07
SYNGR1-203ENST00000328933 SVEP1Q4LDE5 3571 aa8.34□□□□□ -1.07
SYNGR1-203ENST00000328933 COA5Q86WW8 74 aa8.33□□□□□ -1.08
SYNGR1-203ENST00000328933 COL7A1Q02388 2944 aa8.3□□□□□ -1.08
SYNGR1-203ENST00000328933 Q8N9P0 234 aaPredicted RBP8.29□□□□□ -1.08
SYNGR1-203ENST00000328933 KRTAP13-1Q8IUC0 172 aa8.28□□□□□ -1.08
SYNGR1-203ENST00000328933 TRRAPQ9Y4A5 3859 aa8.27□□□□□ -1.09
SYNGR1-203ENST00000328933 CSAG1Q6PB30 78 aa8.27□□□□□ -1.09
SYNGR1-203ENST00000328933 HRES1P13985 223 aa8.26□□□□□ -1.09
SYNGR1-203ENST00000328933 Q5W150 140 aa8.23□□□□□ -1.09
SYNGR1-203ENST00000328933 KLKP1Q107X0 134 aa8.22□□□□□ -1.09
SYNGR1-203ENST00000328933 OCR1Q9BZK8 76 aa8.22□□□□□ -1.09
SYNGR1-203ENST00000328933 RPS29P62273 56 aaKnown RBP8.21□□□□□ -1.1
SYNGR1-203ENST00000328933 ANK3Q12955 4377 aaKnown RBP8.19□□□□□ -1.1
SYNGR1-203ENST00000328933 CYP4F30PQ9H0H9 118 aa8.18□□□□□ -1.1
SYNGR1-203ENST00000328933 A0A0D9SG42 100 aa8.17□□□□□ -1.1
SYNGR1-203ENST00000328933 A0A1B0GVY2 172 aa8.16□□□□□ -1.1
SYNGR1-203ENST00000328933 S4R3F8 94 aa8.16□□□□□ -1.1
SYNGR1-203ENST00000328933 BSNQ9UPA5 3926 aa8.16□□□□□ -1.1
SYNGR1-203ENST00000328933 A8MUN3 132 aa8.16□□□□□ -1.1
SYNGR1-203ENST00000328933 NOTCH2NLQ7Z3S9 236 aa8.15□□□□□ -1.11
SYNGR1-203ENST00000328933 SPINT4Q6UDR6 99 aa8.14□□□□□ -1.11
SYNGR1-203ENST00000328933 UQCR11O14957 56 aa8.12□□□□□ -1.11
SYNGR1-203ENST00000328933 PMAIP1Q13794 54 aa8.12□□□□□ -1.11
SYNGR1-203ENST00000328933 KRTAP1-4P0C5Y4 121 aa8.11□□□□□ -1.11
SYNGR1-203ENST00000328933 H7BZZ5 65 aa8.11□□□□□ -1.11
SYNGR1-203ENST00000328933 ASB16-AS1Q495Z4 193 aa8.11□□□□□ -1.11
SYNGR1-203ENST00000328933 SPANXA2-OT1Q8N9U9 137 aa8.1□□□□□ -1.11
SYNGR1-203ENST00000328933 CAMK2N1Q7Z7J9 78 aa8.06□□□□□ -1.12
SYNGR1-203ENST00000328933 Q5XG85 94 aa8.06□□□□□ -1.12
SYNGR1-203ENST00000328933 RPL37P61927 97 aaKnown RBP8.03□□□□□ -1.12
SYNGR1-203ENST00000328933 R4GN34 69 aa8.03□□□□□ -1.12
SYNGR1-203ENST00000328933 Q75L30 129 aa8.02□□□□□ -1.13
SYNGR1-203ENST00000328933 MEGF8Q7Z7M0 2845 aa8.01□□□□□ -1.13
SYNGR1-203ENST00000328933 MIR22HGQ0VDD5 57 aa7.99□□□□□ -1.13
SYNGR1-203ENST00000328933 KRTAP29-1A8MX34 341 aaPredicted RBP7.96□□□□□ -1.13
SYNGR1-203ENST00000328933 RPS28P62857 69 aaKnown RBP7.95□□□□□ -1.14
SYNGR1-203ENST00000328933 A0A1B0GU33 70 aa7.93□□□□□ -1.14
SYNGR1-203ENST00000328933 C20orf166-AS1Q96NR2 134 aa7.92□□□□□ -1.14
SYNGR1-203ENST00000328933 H1FX-AS1Q4G0G2 97 aa7.89□□□□□ -1.15
SYNGR1-203ENST00000328933 XP32Q5T750 250 aa7.89□□□□□ -1.15
SYNGR1-203ENST00000328933 TPRXLQ17RH7 258 aa7.86□□□□□ -1.15
SYNGR1-203ENST00000328933 M0QZ58 72 aa7.86□□□□□ -1.15
SYNGR1-203ENST00000328933 KRTAP10-8P60410 259 aa7.86□□□□□ -1.15
SYNGR1-203ENST00000328933 LCA10Q71F78 164 aa7.85□□□□□ -1.15
SYNGR1-203ENST00000328933 DNHD1Q96M86 4753 aa7.85□□□□□ -1.15
SYNGR1-203ENST00000328933 A8MUU9 505 aa7.83□□□□□ -1.16
SYNGR1-203ENST00000328933 CRIPTQ9P021 101 aa7.82□□□□□ -1.16
SYNGR1-203ENST00000328933 DMAC1Q96GE9 116 aa7.8□□□□□ -1.16
SYNGR1-203ENST00000328933 ADM2Q7Z4H4 148 aa7.79□□□□□ -1.16
SYNGR1-203ENST00000328933 ZNF469Q96JG9 3925 aaPredicted RBP7.78□□□□□ -1.16
SYNGR1-203ENST00000328933 KRTAP13-3Q3SY46 172 aa7.73□□□□□ -1.17
SYNGR1-203ENST00000328933 PLAC4Q8WY50 150 aa7.73□□□□□ -1.17
SYNGR1-203ENST00000328933 CDC42SE1Q9NRR8 79 aa7.73□□□□□ -1.17
SYNGR1-203ENST00000328933 CYSTM1Q9H1C7 97 aa7.69□□□□□ -1.18
SYNGR1-203ENST00000328933 PRO0628Q9UI54 55 aa7.69□□□□□ -1.18
SYNGR1-203ENST00000328933 VPS13CQ709C8 3753 aa7.63□□□□□ -1.19
SYNGR1-203ENST00000328933 LINC01558Q9Y6Z2 57 aa7.63□□□□□ -1.19
SYNGR1-203ENST00000328933 KRTAP4-5Q9BYR2 181 aa7.59□□□□□ -1.19
SYNGR1-203ENST00000328933 AKAP9Q99996 3911 aa7.57□□□□□ -1.2
SYNGR1-203ENST00000328933 Q1T7F1 81 aa7.56□□□□□ -1.2
SYNGR1-203ENST00000328933 SPATA8Q6RVD6 105 aa7.55□□□□□ -1.2
SYNGR1-203ENST00000328933 KRTAP10-10P60014 251 aa7.52□□□□□ -1.21
SYNGR1-203ENST00000328933 HUWE1Q7Z6Z7 4374 aaKnown RBP7.49□□□□□ -1.21
SYNGR1-203ENST00000328933 KRTAP16-1A8MUX0 517 aa7.48□□□□□ -1.21
SYNGR1-203ENST00000328933 MT1HL1P0DM35 61 aa7.46□□□□□ -1.22
SYNGR1-203ENST00000328933 Q5VV11 94 aa7.39□□□□□ -1.23
SYNGR1-203ENST00000328933 DNAH9Q9NYC9 4486 aa7.36□□□□□ -1.23
SYNGR1-203ENST00000328933 A8MU10 97 aa7.32□□□□□ -1.24
SYNGR1-203ENST00000328933 KRTAP10-4P60372 401 aaPredicted RBP7.31□□□□□ -1.24
SYNGR1-203ENST00000328933 CSMD3Q7Z407 3707 aa7.26□□□□□ -1.25
SYNGR1-203ENST00000328933 ROMO1P60602 79 aa7.22□□□□□ -1.25
SYNGR1-203ENST00000328933 DNAH5Q8TE73 4624 aa7.22□□□□□ -1.25
SYNGR1-203ENST00000328933 KTN1-AS1Q86SY8 53 aa7.18□□□□□ -1.26
SYNGR1-203ENST00000328933 LUZP6Q538Z0 58 aa7.15□□□□□ -1.26
SYNGR1-203ENST00000328933 PLECQ15149 4684 aaKnown RBP7.13□□□□□ -1.27
SYNGR1-203ENST00000328933 TNP1P09430 55 aa7.12□□□□□ -1.27
SYNGR1-203ENST00000328933 PRKDCP78527 4128 aaKnown RBP7.11□□□□□ -1.27
SYNGR1-203ENST00000328933 P0C880 135 aa7.11□□□□□ -1.27
SYNGR1-203ENST00000328933 PRAC1Q96KF2 57 aa7.1□□□□□ -1.27
SYNGR1-203ENST00000328933 PRO2289Q9P1D8 64 aa7.08□□□□□ -1.28
SYNGR1-203ENST00000328933 ALMS1Q8TCU4 4167 aa7.07□□□□□ -1.28
SYNGR1-203ENST00000328933 RYR1P21817 5038 aa7.05□□□□□ -1.28
SYNGR1-203ENST00000328933 DNAH11Q96DT5 4516 aa7.03□□□□□ -1.28
SYNGR1-203ENST00000328933 KIAA1109Q2LD37 5005 aa7.03□□□□□ -1.28
SYNGR1-203ENST00000328933 FAT1Q14517 4588 aa6.97□□□□□ -1.29
SYNGR1-203ENST00000328933 DYNC1H1Q14204 4646 aaKnown RBP6.97□□□□□ -1.29
SYNGR1-203ENST00000328933 STARD9Q9P2P6 4700 aa6.96□□□□□ -1.29
SYNGR1-203ENST00000328933 DNAH1Q9P2D7 4330 aa6.91□□□□□ -1.3
SYNGR1-203ENST00000328933 KRTAP3-1Q9BYR8 98 aa6.89□□□□□ -1.31
SYNGR1-203ENST00000328933 RYR3Q15413 4870 aa6.89□□□□□ -1.31
SYNGR1-203ENST00000328933 ANK2Q01484 3957 aa6.88□□□□□ -1.31
SYNGR1-203ENST00000328933 LRP1BQ9NZR2 4599 aa6.86□□□□□ -1.31
SYNGR1-203ENST00000328933 VPS13DQ5THJ4 4388 aa6.86□□□□□ -1.31
SYNGR1-203ENST00000328933 H0YAA0 97 aa6.83□□□□□ -1.32
SYNGR1-203ENST00000328933 DNAH10Q8IVF4 4471 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms