RNA–Protein interactions for RNA: ENST00000326279.10

LIN28A-202, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-202ENST00000326279 RPS28P62857 69 aaKnown RBP7.71□□□□□ -1.17
LIN28A-202ENST00000326279 H3BPC8 53 aa7.71□□□□□ -1.18
LIN28A-202ENST00000326279 NOTCH2NLQ7Z3S9 236 aa7.71□□□□□ -1.18
LIN28A-202ENST00000326279 SEC61GP60059 68 aa7.7□□□□□ -1.18
LIN28A-202ENST00000326279 LINC00483Q53H64 154 aa7.7□□□□□ -1.18
LIN28A-202ENST00000326279 PLECQ15149 4684 aaKnown RBP7.68□□□□□ -1.18
LIN28A-202ENST00000326279 LOC101927531A0A1B0GV80 90 aa7.68□□□□□ -1.18
LIN28A-202ENST00000326279 FAM229BQ4G0N7 80 aa7.67□□□□□ -1.18
LIN28A-202ENST00000326279 C1orf195Q5TG92 126 aa7.67□□□□□ -1.18
LIN28A-202ENST00000326279 CD164Q04900 197 aa7.66□□□□□ -1.18
LIN28A-202ENST00000326279 V9GYY9 64 aa7.66□□□□□ -1.18
LIN28A-202ENST00000326279 KRTAP13-2Q52LG2 175 aa7.66□□□□□ -1.18
LIN28A-202ENST00000326279 IGLV7-46A0A075B6I9 117 aa7.65□□□□□ -1.18
LIN28A-202ENST00000326279 COA5Q86WW8 74 aa7.65□□□□□ -1.19
LIN28A-202ENST00000326279 Q6ZSA8 131 aa7.64□□□□□ -1.19
LIN28A-202ENST00000326279 ACYP2P14621 99 aa7.63□□□□□ -1.19
LIN28A-202ENST00000326279 ATP11AUNQ6ZP68 121 aa7.63□□□□□ -1.19
LIN28A-202ENST00000326279 Q8N9P0 234 aaPredicted RBP7.62□□□□□ -1.19
LIN28A-202ENST00000326279 Q8N1X5 172 aa7.62□□□□□ -1.19
LIN28A-202ENST00000326279 A8MUN3 132 aa7.61□□□□□ -1.19
LIN28A-202ENST00000326279 STARD9Q9P2P6 4700 aa7.6□□□□□ -1.19
LIN28A-202ENST00000326279 KRTAP29-1A8MX34 341 aaPredicted RBP7.58□□□□□ -1.2
LIN28A-202ENST00000326279 DNAH10Q8IVF4 4471 aa7.56□□□□□ -1.2
LIN28A-202ENST00000326279 OXTP01178 125 aa7.54□□□□□ -1.2
LIN28A-202ENST00000326279 A0A1B0GVY2 172 aa7.52□□□□□ -1.21
LIN28A-202ENST00000326279 HRES1P13985 223 aa7.52□□□□□ -1.21
LIN28A-202ENST00000326279 Q5W150 140 aa7.52□□□□□ -1.21
LIN28A-202ENST00000326279 A0A1B0GU69 56 aa7.51□□□□□ -1.21
LIN28A-202ENST00000326279 LYSTQ99698 3801 aa7.51□□□□□ -1.21
LIN28A-202ENST00000326279 KRTAP1-4P0C5Y4 121 aa7.49□□□□□ -1.21
LIN28A-202ENST00000326279 CYP4F30PQ9H0H9 118 aa7.49□□□□□ -1.21
LIN28A-202ENST00000326279 PMAIP1Q13794 54 aa7.47□□□□□ -1.21
LIN28A-202ENST00000326279 SPANXA2-OT1Q8N9U9 137 aa7.47□□□□□ -1.21
LIN28A-202ENST00000326279 COX6B2Q6YFQ2 88 aa7.46□□□□□ -1.22
LIN28A-202ENST00000326279 KMT2AQ03164 3969 aa7.45□□□□□ -1.22
LIN28A-202ENST00000326279 FP248Q71RG6 208 aaPredicted RBP7.45□□□□□ -1.22
LIN28A-202ENST00000326279 DNAH11Q96DT5 4516 aa7.44□□□□□ -1.22
LIN28A-202ENST00000326279 ZCCHC13Q8WW36 166 aaKnown RBP7.42□□□□□ -1.22
LIN28A-202ENST00000326279 CMYA5Q8N3K9 4069 aa7.42□□□□□ -1.22
LIN28A-202ENST00000326279 SPINK7P58062 85 aa7.38□□□□□ -1.23
LIN28A-202ENST00000326279 Q5XG85 94 aa7.37□□□□□ -1.23
LIN28A-202ENST00000326279 DNAH1Q9P2D7 4330 aa7.37□□□□□ -1.23
LIN28A-202ENST00000326279 PRO0628Q9UI54 55 aa7.37□□□□□ -1.23
LIN28A-202ENST00000326279 DNAH5Q8TE73 4624 aa7.36□□□□□ -1.23
LIN28A-202ENST00000326279 FAT1Q14517 4588 aa7.35□□□□□ -1.23
LIN28A-202ENST00000326279 ASB16-AS1Q495Z4 193 aa7.31□□□□□ -1.24
LIN28A-202ENST00000326279 K7ERS5 55 aa7.3□□□□□ -1.24
LIN28A-202ENST00000326279 KIAA1109Q2LD37 5005 aa7.29□□□□□ -1.24
LIN28A-202ENST00000326279 DNAH7Q8WXX0 4024 aa7.29□□□□□ -1.24
LIN28A-202ENST00000326279 KRTAP4-5Q9BYR2 181 aa7.29□□□□□ -1.24
LIN28A-202ENST00000326279 Q1T7F1 81 aa7.26□□□□□ -1.25
LIN28A-202ENST00000326279 DNAH3Q8TD57 4116 aa7.25□□□□□ -1.25
LIN28A-202ENST00000326279 VPS13DQ5THJ4 4388 aa7.25□□□□□ -1.25
LIN28A-202ENST00000326279 KMT2CQ8NEZ4 4911 aaKnown RBP7.25□□□□□ -1.25
LIN28A-202ENST00000326279 UQCR11O14957 56 aa7.24□□□□□ -1.25
LIN28A-202ENST00000326279 RBM12B-AS1Q9P1G2 102 aa7.21□□□□□ -1.26
LIN28A-202ENST00000326279 HYDINQ4G0P3 5121 aa7.21□□□□□ -1.26
LIN28A-202ENST00000326279 MIR22HGQ0VDD5 57 aa7.19□□□□□ -1.26
LIN28A-202ENST00000326279 DYNC1H1Q14204 4646 aaKnown RBP7.19□□□□□ -1.26
LIN28A-202ENST00000326279 DMAC1Q96GE9 116 aa7.18□□□□□ -1.26
LIN28A-202ENST00000326279 M0R2T5 61 aa7.18□□□□□ -1.26
LIN28A-202ENST00000326279 Q5VV11 94 aa7.18□□□□□ -1.26
LIN28A-202ENST00000326279 LRP1BQ9NZR2 4599 aa7.17□□□□□ -1.26
LIN28A-202ENST00000326279 A0A0D9SG42 100 aa7.17□□□□□ -1.26
LIN28A-202ENST00000326279 RPS29P62273 56 aaKnown RBP7.15□□□□□ -1.26
LIN28A-202ENST00000326279 RYR3Q15413 4870 aa7.15□□□□□ -1.26
LIN28A-202ENST00000326279 LINC01558Q9Y6Z2 57 aa7.15□□□□□ -1.27
LIN28A-202ENST00000326279 SEC61BP60468 96 aaKnown RBP7.14□□□□□ -1.27
LIN28A-202ENST00000326279 RYR1P21817 5038 aa7.14□□□□□ -1.27
LIN28A-202ENST00000326279 KRTAP10-8P60410 259 aa7.13□□□□□ -1.27
LIN28A-202ENST00000326279 LINC01554Q52M75 96 aa7.13□□□□□ -1.27
LIN28A-202ENST00000326279 SACSQ9NZJ4 4579 aa7.09□□□□□ -1.27
LIN28A-202ENST00000326279 DNAH8Q96JB1 4490 aa7.09□□□□□ -1.28
LIN28A-202ENST00000326279 KRTAP16-1A8MUX0 517 aa7.08□□□□□ -1.28
LIN28A-202ENST00000326279 Q75L30 129 aa7.08□□□□□ -1.28
LIN28A-202ENST00000326279 DNAH2Q9P225 4427 aa7.08□□□□□ -1.28
LIN28A-202ENST00000326279 DNAH6Q9C0G6 4158 aa7.07□□□□□ -1.28
LIN28A-202ENST00000326279 A8MU10 97 aa7.07□□□□□ -1.28
LIN28A-202ENST00000326279 XP32Q5T750 250 aa7.07□□□□□ -1.28
LIN28A-202ENST00000326279 CDC42SE1Q9NRR8 79 aa7.06□□□□□ -1.28
LIN28A-202ENST00000326279 A0A1B0GU33 70 aa7.05□□□□□ -1.28
LIN28A-202ENST00000326279 A8MUU9 505 aa7.04□□□□□ -1.28
LIN28A-202ENST00000326279 PKHD1P08F94 4074 aa7.04□□□□□ -1.28
LIN28A-202ENST00000326279 KRTAP10-4P60372 401 aaPredicted RBP7.04□□□□□ -1.28
LIN28A-202ENST00000326279 S4R3F8 94 aa7.04□□□□□ -1.28
LIN28A-202ENST00000326279 DYNC2H1Q8NCM8 4307 aaKnown RBP7.03□□□□□ -1.28
LIN28A-202ENST00000326279 DNAH17Q9UFH2 4485 aa7.03□□□□□ -1.28
LIN28A-202ENST00000326279 C20orf166-AS1Q96NR2 134 aa7.03□□□□□ -1.28
LIN28A-202ENST00000326279 RPL37P61927 97 aaKnown RBP7.02□□□□□ -1.29
LIN28A-202ENST00000326279 SPINT4Q6UDR6 99 aa7.01□□□□□ -1.29
LIN28A-202ENST00000326279 MYCBP2O75592 4640 aa7□□□□□ -1.29
LIN28A-202ENST00000326279 ALMS1Q8TCU4 4167 aa7□□□□□ -1.29
LIN28A-202ENST00000326279 RYR2Q92736 4967 aa6.98□□□□□ -1.29
LIN28A-202ENST00000326279 CSAG1Q6PB30 78 aa6.98□□□□□ -1.29
LIN28A-202ENST00000326279 MT1HL1P0DM35 61 aa6.97□□□□□ -1.29
LIN28A-202ENST00000326279 VPS13BQ7Z7G8 4022 aa6.97□□□□□ -1.29
LIN28A-202ENST00000326279 APOBP04114 4563 aaKnown RBP6.97□□□□□ -1.29
LIN28A-202ENST00000326279 LCA10Q71F78 164 aa6.97□□□□□ -1.29
LIN28A-202ENST00000326279 FAT3Q8TDW7 4589 aa6.96□□□□□ -1.29
LIN28A-202ENST00000326279 KRTAP13-3Q3SY46 172 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms