RNA–Protein interactions for RNA: ENST00000325167.9

CHMP6-201, Transcript of charged multivesicular body protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP6, Length 1,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-201ENST00000325167 ABCA13Q86UQ4 5058 aa11.3□□□□□ -0.6
CHMP6-201ENST00000325167 FAM236DA0A1B0GTK5 79 aa11.3□□□□□ -0.6
CHMP6-201ENST00000325167 FAM236CP0DP71 79 aa11.3□□□□□ -0.6
CHMP6-201ENST00000325167 RPS28P62857 69 aaKnown RBP11.3□□□□□ -0.6
CHMP6-201ENST00000325167 A0A087X002 238 aa11.3□□□□□ -0.6
CHMP6-201ENST00000325167 KRTAP1-4P0C5Y4 121 aa11.29□□□□□ -0.6
CHMP6-201ENST00000325167 MP68P56378 58 aa11.29□□□□□ -0.6
CHMP6-201ENST00000325167 C8orf17Q9NRJ1 99 aa11.29□□□□□ -0.6
CHMP6-201ENST00000325167 KRTAP13-2Q52LG2 175 aa11.28□□□□□ -0.6
CHMP6-201ENST00000325167 H3BPC8 53 aa11.27□□□□□ -0.6
CHMP6-201ENST00000325167 KRTAP4-5Q9BYR2 181 aa11.27□□□□□ -0.6
CHMP6-201ENST00000325167 APOBP04114 4563 aaKnown RBP11.26□□□□□ -0.61
CHMP6-201ENST00000325167 LIMD2Q9BT23 127 aa11.26□□□□□ -0.61
CHMP6-201ENST00000325167 TP53AIP1Q9HCN2 124 aa11.26□□□□□ -0.61
CHMP6-201ENST00000325167 IGHV6-1A0A0B4J1U7 121 aa11.24□□□□□ -0.61
CHMP6-201ENST00000325167 PLA2G1BP04054 148 aaKnown RBP11.24□□□□□ -0.61
CHMP6-201ENST00000325167 ZCCHC13Q8WW36 166 aaKnown RBP11.23□□□□□ -0.61
CHMP6-201ENST00000325167 C8orf87E5RJ46 101 aa11.21□□□□□ -0.61
CHMP6-201ENST00000325167 C4orf48Q5BLP8 95 aa11.21□□□□□ -0.61
CHMP6-201ENST00000325167 TYMSOSQ8TAI1 123 aa11.2□□□□□ -0.62
CHMP6-201ENST00000325167 MRPL34Q9BQ48 92 aaKnown RBP11.18□□□□□ -0.62
CHMP6-201ENST00000325167 H0Y9P7 68 aa11.17□□□□□ -0.62
CHMP6-201ENST00000325167 SPINK1P00995 79 aa11.17□□□□□ -0.62
CHMP6-201ENST00000325167 SERP1Q9Y6X1 66 aa11.16□□□□□ -0.62
CHMP6-201ENST00000325167 VPS13BQ7Z7G8 4022 aa11.15□□□□□ -0.62
CHMP6-201ENST00000325167 TRAV22A0A0B4J277 110 aa11.15□□□□□ -0.62
CHMP6-201ENST00000325167 SPAG11AQ6PDA7 123 aa11.14□□□□□ -0.63
CHMP6-201ENST00000325167 RPS29P62273 56 aaKnown RBP11.13□□□□□ -0.63
CHMP6-201ENST00000325167 C1orf195Q5TG92 126 aa11.12□□□□□ -0.63
CHMP6-201ENST00000325167 Q8N1X5 172 aa11.12□□□□□ -0.63
CHMP6-201ENST00000325167 LINC00208Q96KT6 92 aa11.12□□□□□ -0.63
CHMP6-201ENST00000325167 SMR3BP02814 79 aaPredicted RBP11.11□□□□□ -0.63
CHMP6-201ENST00000325167 NDUFS5O43920 106 aa11.09□□□□□ -0.63
CHMP6-201ENST00000325167 C1orf64Q8NEQ6 169 aa11.07□□□□□ -0.64
CHMP6-201ENST00000325167 LINC00313P59037 77 aa11.06□□□□□ -0.64
CHMP6-201ENST00000325167 LINC00304Q8N9R0 145 aa11.06□□□□□ -0.64
CHMP6-201ENST00000325167 NOTCH2NLQ7Z3S9 236 aa11.05□□□□□ -0.64
CHMP6-201ENST00000325167 KRTAP10-4P60372 401 aaPredicted RBP11.04□□□□□ -0.64
CHMP6-201ENST00000325167 FAT1Q14517 4588 aa11.04□□□□□ -0.64
CHMP6-201ENST00000325167 PRR26Q8N8Z3 221 aa11.04□□□□□ -0.64
CHMP6-201ENST00000325167 SPANXA2-OT1Q8N9U9 137 aa11.01□□□□□ -0.65
CHMP6-201ENST00000325167 CYP4F30PQ9H0H9 118 aa10.99□□□□□ -0.65
CHMP6-201ENST00000325167 FAM229AH3BQW9 127 aa10.98□□□□□ -0.65
CHMP6-201ENST00000325167 OXTP01178 125 aa10.96□□□□□ -0.65
CHMP6-201ENST00000325167 Q5VSD8 79 aa10.96□□□□□ -0.65
CHMP6-201ENST00000325167 Q8N9P0 234 aaPredicted RBP10.95□□□□□ -0.66
CHMP6-201ENST00000325167 LOC101927531A0A1B0GV80 90 aa10.94□□□□□ -0.66
CHMP6-201ENST00000325167 SMIM26A0A096LP01 95 aa10.92□□□□□ -0.66
CHMP6-201ENST00000325167 KRTAP16-1A8MUX0 517 aa10.88□□□□□ -0.67
CHMP6-201ENST00000325167 KRTAP13-3Q3SY46 172 aa10.87□□□□□ -0.67
CHMP6-201ENST00000325167 MYCBP2O75592 4640 aa10.86□□□□□ -0.67
CHMP6-201ENST00000325167 IGLV7-46A0A075B6I9 117 aa10.85□□□□□ -0.67
CHMP6-201ENST00000325167 HERC1Q15751 4861 aa10.85□□□□□ -0.67
CHMP6-201ENST00000325167 FLG2Q5D862 2391 aaPredicted RBP10.84□□□□□ -0.67
CHMP6-201ENST00000325167 Q5W150 140 aa10.82□□□□□ -0.68
CHMP6-201ENST00000325167 PRR4Q16378 134 aa10.8□□□□□ -0.68
CHMP6-201ENST00000325167 PCOTHQ58A44 107 aa10.8□□□□□ -0.68
CHMP6-201ENST00000325167 DMBT1Q9UGM3 2413 aaPredicted RBP10.8□□□□□ -0.68
CHMP6-201ENST00000325167 PKHD1L1Q86WI1 4243 aa10.8□□□□□ -0.68
CHMP6-201ENST00000325167 IGKV2-30P06310 120 aa10.72□□□□□ -0.69
CHMP6-201ENST00000325167 FP248Q71RG6 208 aaPredicted RBP10.72□□□□□ -0.69
CHMP6-201ENST00000325167 KRTAP10-8P60410 259 aa10.69□□□□□ -0.7
CHMP6-201ENST00000325167 J3QL48 77 aa10.65□□□□□ -0.7
CHMP6-201ENST00000325167 RETNLBQ9BQ08 111 aa10.64□□□□□ -0.71
CHMP6-201ENST00000325167 COA5Q86WW8 74 aa10.63□□□□□ -0.71
CHMP6-201ENST00000325167 V9GYY9 64 aa10.63□□□□□ -0.71
CHMP6-201ENST00000325167 C4orf26Q17RF5 130 aa10.63□□□□□ -0.71
CHMP6-201ENST00000325167 C20orf166-AS1Q96NR2 134 aa10.63□□□□□ -0.71
CHMP6-201ENST00000325167 LRP1Q07954 4544 aaKnown RBP10.63□□□□□ -0.71
CHMP6-201ENST00000325167 A8MUU9 505 aa10.61□□□□□ -0.71
CHMP6-201ENST00000325167 Q1T7F1 81 aa10.61□□□□□ -0.71
CHMP6-201ENST00000325167 HRES1P13985 223 aa10.6□□□□□ -0.71
CHMP6-201ENST00000325167 MPLKIPQ8TAP9 179 aa10.58□□□□□ -0.72
CHMP6-201ENST00000325167 ACYP2P14621 99 aa10.57□□□□□ -0.72
CHMP6-201ENST00000325167 FAT3Q8TDW7 4589 aa10.56□□□□□ -0.72
CHMP6-201ENST00000325167 IGKV2D-30A0A075B6S6 120 aa10.56□□□□□ -0.72
CHMP6-201ENST00000325167 C9orf92A6NGG3 77 aa10.56□□□□□ -0.72
CHMP6-201ENST00000325167 C7orf65Q6ZTY9 151 aa10.56□□□□□ -0.72
CHMP6-201ENST00000325167 DMAC1Q96GE9 116 aa10.54□□□□□ -0.72
CHMP6-201ENST00000325167 Q75L30 129 aa10.5□□□□□ -0.73
CHMP6-201ENST00000325167 TNXBP22105 4242 aa10.47□□□□□ -0.73
CHMP6-201ENST00000325167 A8MUN3 132 aa10.41□□□□□ -0.74
CHMP6-201ENST00000325167 CHKB-CPT1BH3BT56 60 aa10.41□□□□□ -0.74
CHMP6-201ENST00000325167 HMCN2Q8NDA2 5059 aa10.4□□□□□ -0.74
CHMP6-201ENST00000325167 MT1HL1P0DM35 61 aa10.4□□□□□ -0.74
CHMP6-201ENST00000325167 LINC01558Q9Y6Z2 57 aa10.34□□□□□ -0.75
CHMP6-201ENST00000325167 ATP11AUNQ6ZP68 121 aa10.33□□□□□ -0.76
CHMP6-201ENST00000325167 PSPHP1O15172 72 aa10.32□□□□□ -0.76
CHMP6-201ENST00000325167 SPINK7P58062 85 aa10.3□□□□□ -0.76
CHMP6-201ENST00000325167 RPL37P61927 97 aaKnown RBP10.3□□□□□ -0.76
CHMP6-201ENST00000325167 PRR15LQ9BU68 103 aa10.29□□□□□ -0.76
CHMP6-201ENST00000325167 UBR4Q5T4S7 5183 aa10.27□□□□□ -0.77
CHMP6-201ENST00000325167 Q5VV11 94 aa10.25□□□□□ -0.77
CHMP6-201ENST00000325167 XP32Q5T750 250 aa10.25□□□□□ -0.77
CHMP6-201ENST00000325167 BRK1Q8WUW1 75 aa10.21□□□□□ -0.78
CHMP6-201ENST00000325167 PRO0628Q9UI54 55 aa10.21□□□□□ -0.78
CHMP6-201ENST00000325167 SPTSSBQ8NFR3 76 aa10.19□□□□□ -0.78
CHMP6-201ENST00000325167 TPRXLQ17RH7 258 aa10.17□□□□□ -0.78
CHMP6-201ENST00000325167 COX6B2Q6YFQ2 88 aa10.13□□□□□ -0.79
CHMP6-201ENST00000325167 LRP2P98164 4655 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms