RNA–Protein interactions for RNA: ENST00000323055.10

PPP3CA-201, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 4,519 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-201ENST00000323055 Q8N9P0 234 aaPredicted RBP10.13□□□□□ -0.79
PPP3CA-201ENST00000323055 LINC00483Q53H64 154 aa10.12□□□□□ -0.79
PPP3CA-201ENST00000323055 A0A087X002 238 aa10.11□□□□□ -0.79
PPP3CA-201ENST00000323055 HRES1P13985 223 aa10.09□□□□□ -0.79
PPP3CA-201ENST00000323055 IGLV7-46A0A075B6I9 117 aa10.07□□□□□ -0.8
PPP3CA-201ENST00000323055 CYP4F30PQ9H0H9 118 aa10.07□□□□□ -0.8
PPP3CA-201ENST00000323055 UQCR11O14957 56 aa10.03□□□□□ -0.8
PPP3CA-201ENST00000323055 NOTCH2NLQ7Z3S9 236 aa10□□□□□ -0.81
PPP3CA-201ENST00000323055 Q5W150 140 aa10□□□□□ -0.81
PPP3CA-201ENST00000323055 KRTAP29-1A8MX34 341 aaPredicted RBP9.99□□□□□ -0.81
PPP3CA-201ENST00000323055 FP248Q71RG6 208 aaPredicted RBP9.98□□□□□ -0.81
PPP3CA-201ENST00000323055 OXTP01178 125 aa9.97□□□□□ -0.81
PPP3CA-201ENST00000323055 KRTAP13-1Q8IUC0 172 aa9.97□□□□□ -0.81
PPP3CA-201ENST00000323055 ZCCHC13Q8WW36 166 aaKnown RBP9.95□□□□□ -0.82
PPP3CA-201ENST00000323055 Q5VSD8 79 aa9.95□□□□□ -0.82
PPP3CA-201ENST00000323055 TRRAPQ9Y4A5 3859 aa9.95□□□□□ -0.82
PPP3CA-201ENST00000323055 MIR22HGQ0VDD5 57 aa9.94□□□□□ -0.82
PPP3CA-201ENST00000323055 Q5XG85 94 aa9.93□□□□□ -0.82
PPP3CA-201ENST00000323055 Q1T7F1 81 aa9.92□□□□□ -0.82
PPP3CA-201ENST00000323055 COX6B2Q6YFQ2 88 aa9.92□□□□□ -0.82
PPP3CA-201ENST00000323055 KRTAP13-2Q52LG2 175 aa9.85□□□□□ -0.83
PPP3CA-201ENST00000323055 SPINK7P58062 85 aa9.85□□□□□ -0.83
PPP3CA-201ENST00000323055 RBM12B-AS1Q9P1G2 102 aa9.83□□□□□ -0.84
PPP3CA-201ENST00000323055 Q6ZSA8 131 aa9.83□□□□□ -0.84
PPP3CA-201ENST00000323055 ANK3Q12955 4377 aaKnown RBP9.82□□□□□ -0.84
PPP3CA-201ENST00000323055 VPS13CQ709C8 3753 aa9.78□□□□□ -0.84
PPP3CA-201ENST00000323055 A0A0D9SG42 100 aa9.77□□□□□ -0.85
PPP3CA-201ENST00000323055 CDC42SE1Q9NRR8 79 aa9.76□□□□□ -0.85
PPP3CA-201ENST00000323055 SRRM2Q9UQ35 2752 aaKnown RBP9.76□□□□□ -0.85
PPP3CA-201ENST00000323055 LINC01558Q9Y6Z2 57 aa9.75□□□□□ -0.85
PPP3CA-201ENST00000323055 LINC01554Q52M75 96 aa9.72□□□□□ -0.85
PPP3CA-201ENST00000323055 Q5VV11 94 aa9.71□□□□□ -0.85
PPP3CA-201ENST00000323055 Q75L30 129 aa9.71□□□□□ -0.86
PPP3CA-201ENST00000323055 ASB16-AS1Q495Z4 193 aa9.69□□□□□ -0.86
PPP3CA-201ENST00000323055 DMAC1Q96GE9 116 aa9.66□□□□□ -0.86
PPP3CA-201ENST00000323055 A0A1B0GU33 70 aa9.66□□□□□ -0.86
PPP3CA-201ENST00000323055 SPINT4Q6UDR6 99 aa9.63□□□□□ -0.87
PPP3CA-201ENST00000323055 FBN3Q75N90 2809 aa9.62□□□□□ -0.87
PPP3CA-201ENST00000323055 ZNF469Q96JG9 3925 aaPredicted RBP9.6□□□□□ -0.87
PPP3CA-201ENST00000323055 KTN1-AS1Q86SY8 53 aa9.57□□□□□ -0.88
PPP3CA-201ENST00000323055 KRTAP1-4P0C5Y4 121 aa9.54□□□□□ -0.88
PPP3CA-201ENST00000323055 S4R3F8 94 aa9.54□□□□□ -0.88
PPP3CA-201ENST00000323055 RPS29P62273 56 aaKnown RBP9.52□□□□□ -0.89
PPP3CA-201ENST00000323055 CSAG1Q6PB30 78 aa9.52□□□□□ -0.89
PPP3CA-201ENST00000323055 SEC61BP60468 96 aaKnown RBP9.45□□□□□ -0.9
PPP3CA-201ENST00000323055 CRIPTQ9P021 101 aa9.45□□□□□ -0.9
PPP3CA-201ENST00000323055 MEGF8Q7Z7M0 2845 aa9.45□□□□□ -0.9
PPP3CA-201ENST00000323055 COL7A1Q02388 2944 aa9.41□□□□□ -0.9
PPP3CA-201ENST00000323055 LCA10Q71F78 164 aa9.39□□□□□ -0.91
PPP3CA-201ENST00000323055 M0R2T5 61 aa9.37□□□□□ -0.91
PPP3CA-201ENST00000323055 PRAC1Q96KF2 57 aa9.37□□□□□ -0.91
PPP3CA-201ENST00000323055 SPATA8Q6RVD6 105 aa9.32□□□□□ -0.92
PPP3CA-201ENST00000323055 A8MU10 97 aa9.29□□□□□ -0.92
PPP3CA-201ENST00000323055 R4GN34 69 aa9.29□□□□□ -0.92
PPP3CA-201ENST00000323055 H1FX-AS1Q4G0G2 97 aa9.28□□□□□ -0.92
PPP3CA-201ENST00000323055 A8MUU9 505 aa9.28□□□□□ -0.92
PPP3CA-201ENST00000323055 CAMK2N1Q7Z7J9 78 aa9.27□□□□□ -0.93
PPP3CA-201ENST00000323055 RPL37P61927 97 aaKnown RBP9.26□□□□□ -0.93
PPP3CA-201ENST00000323055 C20orf166-AS1Q96NR2 134 aa9.25□□□□□ -0.93
PPP3CA-201ENST00000323055 ADM2Q7Z4H4 148 aa9.21□□□□□ -0.93
PPP3CA-201ENST00000323055 KRTAP16-1A8MUX0 517 aa9.17□□□□□ -0.94
PPP3CA-201ENST00000323055 M0QZ58 72 aa9.17□□□□□ -0.94
PPP3CA-201ENST00000323055 AKAP9Q99996 3911 aa9.15□□□□□ -0.94
PPP3CA-201ENST00000323055 A0A1B0GVY2 172 aa9.13□□□□□ -0.95
PPP3CA-201ENST00000323055 XP32Q5T750 250 aa9.11□□□□□ -0.95
PPP3CA-201ENST00000323055 CSMD3Q7Z407 3707 aa9.1□□□□□ -0.95
PPP3CA-201ENST00000323055 HUWE1Q7Z6Z7 4374 aaKnown RBP9.03□□□□□ -0.96
PPP3CA-201ENST00000323055 ROMO1P60602 79 aa8.99□□□□□ -0.97
PPP3CA-201ENST00000323055 A6NN06 94 aa8.98□□□□□ -0.97
PPP3CA-201ENST00000323055 KRTAP13-3Q3SY46 172 aa8.97□□□□□ -0.97
PPP3CA-201ENST00000323055 KRTAP10-8P60410 259 aa8.94□□□□□ -0.98
PPP3CA-201ENST00000323055 TPRXLQ17RH7 258 aa8.85□□□□□ -0.99
PPP3CA-201ENST00000323055 DNAH9Q9NYC9 4486 aa8.76□□□□□ -1.01
PPP3CA-201ENST00000323055 DNHD1Q96M86 4753 aa8.74□□□□□ -1.01
PPP3CA-201ENST00000323055 H0YAA0 97 aa8.73□□□□□ -1.01
PPP3CA-201ENST00000323055 PLAC4Q8WY50 150 aa8.7□□□□□ -1.02
PPP3CA-201ENST00000323055 LUZP6Q538Z0 58 aa8.7□□□□□ -1.02
PPP3CA-201ENST00000323055 P0C880 135 aa8.67□□□□□ -1.02
PPP3CA-201ENST00000323055 KRTAP25-1Q3LHN0 102 aa8.66□□□□□ -1.02
PPP3CA-201ENST00000323055 PLECQ15149 4684 aaKnown RBP8.62□□□□□ -1.03
PPP3CA-201ENST00000323055 KRTAP3-1Q9BYR8 98 aa8.58□□□□□ -1.04
PPP3CA-201ENST00000323055 KRTAP10-4P60372 401 aaPredicted RBP8.52□□□□□ -1.05
PPP3CA-201ENST00000323055 DNAH10Q8IVF4 4471 aa8.5□□□□□ -1.05
PPP3CA-201ENST00000323055 DNAH11Q96DT5 4516 aa8.48□□□□□ -1.05
PPP3CA-201ENST00000323055 C10orf95Q9H7T3 257 aa8.48□□□□□ -1.05
PPP3CA-201ENST00000323055 MT1HL1P0DM35 61 aa8.47□□□□□ -1.05
PPP3CA-201ENST00000323055 DNAH1Q9P2D7 4330 aa8.47□□□□□ -1.05
PPP3CA-201ENST00000323055 DNAH5Q8TE73 4624 aa8.44□□□□□ -1.06
PPP3CA-201ENST00000323055 STARD9Q9P2P6 4700 aa8.39□□□□□ -1.07
PPP3CA-201ENST00000323055 PRKDCP78527 4128 aaKnown RBP8.39□□□□□ -1.07
PPP3CA-201ENST00000323055 KRTAP4-5Q9BYR2 181 aa8.38□□□□□ -1.07
PPP3CA-201ENST00000323055 TNP1P09430 55 aa8.34□□□□□ -1.07
PPP3CA-201ENST00000323055 H3BS24 57 aa8.33□□□□□ -1.08
PPP3CA-201ENST00000323055 KRTAP10-10P60014 251 aa8.32□□□□□ -1.08
PPP3CA-201ENST00000323055 VPS13DQ5THJ4 4388 aa8.31□□□□□ -1.08
PPP3CA-201ENST00000323055 FAT1Q14517 4588 aa8.25□□□□□ -1.09
PPP3CA-201ENST00000323055 KRTAP12-2P59991 146 aa8.23□□□□□ -1.09
PPP3CA-201ENST00000323055 ANK2Q01484 3957 aa8.23□□□□□ -1.09
PPP3CA-201ENST00000323055 KRTAP10-6P60371 365 aaPredicted RBP8.19□□□□□ -1.1
PPP3CA-201ENST00000323055 ALMS1Q8TCU4 4167 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms