RNA–Protein interactions for RNA: ENST00000322019.13

TM6SF1-202, Transcript of transmembrane 6 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM6SF1, Length 2,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-202ENST00000322019 NDUFC1O43677 76 aa15.18■□□□□ 0.02
TM6SF1-202ENST00000322019 KRTAP17-1Q9BYP8 105 aa15.18■□□□□ 0.02
TM6SF1-202ENST00000322019 FAM229AH3BQW9 127 aa15.17■□□□□ 0.02
TM6SF1-202ENST00000322019 CDK2AP2O75956 126 aa15.17■□□□□ 0.02
TM6SF1-202ENST00000322019 KRTAP29-1A8MX34 341 aaPredicted RBP15.16■□□□□ 0.02
TM6SF1-202ENST00000322019 MMP24-AS1A0A0U1RRL7 71 aa15.16■□□□□ 0.02
TM6SF1-202ENST00000322019 Q5VSD8 79 aa15.16■□□□□ 0.02
TM6SF1-202ENST00000322019 CASC2Q6XLA1 102 aa15.16■□□□□ 0.02
TM6SF1-202ENST00000322019 PKHD1L1Q86WI1 4243 aa15.15■□□□□ 0.02
TM6SF1-202ENST00000322019 A0A1B0GVX0 72 aa15.13■□□□□ 0.01
TM6SF1-202ENST00000322019 NOTCH2NLQ7Z3S9 236 aa15.13■□□□□ 0.01
TM6SF1-202ENST00000322019 C4orf48Q5BLP8 95 aa15.13■□□□□ 0.01
TM6SF1-202ENST00000322019 ASB16-AS1Q495Z4 193 aa15.11■□□□□ 0.01
TM6SF1-202ENST00000322019 C1orf195Q5TG92 126 aa15.11■□□□□ 0.01
TM6SF1-202ENST00000322019 LRP1Q07954 4544 aaKnown RBP15.1■□□□□ 0.01
TM6SF1-202ENST00000322019 LINC00304Q8N9R0 145 aa15.09■□□□□ 0.01
TM6SF1-202ENST00000322019 C8orf17Q9NRJ1 99 aa15.08■□□□□ 0.01
TM6SF1-202ENST00000322019 Q5XG85 94 aa15.08■□□□□ 0
TM6SF1-202ENST00000322019 hDV103S1A0JD37 113 aa15.07■□□□□ 0
TM6SF1-202ENST00000322019 ZCCHC13Q8WW36 166 aaKnown RBP15.05■□□□□ 0
TM6SF1-202ENST00000322019 LIMD2Q9BT23 127 aa15.05■□□□□ 0
TM6SF1-202ENST00000322019 SPINK1P00995 79 aa15.05■□□□□ -0
TM6SF1-202ENST00000322019 C5orf47Q569G3 176 aa15.03■□□□□ -0
TM6SF1-202ENST00000322019 SERP1Q9Y6X1 66 aa15.02□□□□□ -0.01
TM6SF1-202ENST00000322019 ATP5EP56381 51 aaPredicted RBP14.98□□□□□ -0.01
TM6SF1-202ENST00000322019 TNXBP22105 4242 aa14.94□□□□□ -0.02
TM6SF1-202ENST00000322019 FLG2Q5D862 2391 aaPredicted RBP14.93□□□□□ -0.02
TM6SF1-202ENST00000322019 SPAG11AQ6PDA7 123 aa14.93□□□□□ -0.02
TM6SF1-202ENST00000322019 MYCBP2O75592 4640 aa14.9□□□□□ -0.02
TM6SF1-202ENST00000322019 NDUFS5O43920 106 aa14.89□□□□□ -0.03
TM6SF1-202ENST00000322019 MRPL34Q9BQ48 92 aaKnown RBP14.88□□□□□ -0.03
TM6SF1-202ENST00000322019 MP68P56378 58 aa14.87□□□□□ -0.03
TM6SF1-202ENST00000322019 FAT3Q8TDW7 4589 aa14.87□□□□□ -0.03
TM6SF1-202ENST00000322019 H0Y9P7 68 aa14.86□□□□□ -0.03
TM6SF1-202ENST00000322019 RPS29P62273 56 aaKnown RBP14.86□□□□□ -0.03
TM6SF1-202ENST00000322019 Q8N1X5 172 aa14.85□□□□□ -0.03
TM6SF1-202ENST00000322019 LINC00208Q96KT6 92 aa14.85□□□□□ -0.03
TM6SF1-202ENST00000322019 LINC00313P59037 77 aa14.84□□□□□ -0.03
TM6SF1-202ENST00000322019 C8orf87E5RJ46 101 aa14.81□□□□□ -0.04
TM6SF1-202ENST00000322019 RETNLBQ9BQ08 111 aa14.81□□□□□ -0.04
TM6SF1-202ENST00000322019 TRAV22A0A0B4J277 110 aa14.8□□□□□ -0.04
TM6SF1-202ENST00000322019 KRTAP10-8P60410 259 aa14.77□□□□□ -0.04
TM6SF1-202ENST00000322019 H3BPC8 53 aa14.75□□□□□ -0.05
TM6SF1-202ENST00000322019 KRTAP16-1A8MUX0 517 aa14.72□□□□□ -0.05
TM6SF1-202ENST00000322019 C4orf26Q17RF5 130 aa14.72□□□□□ -0.05
TM6SF1-202ENST00000322019 FP248Q71RG6 208 aaPredicted RBP14.72□□□□□ -0.05
TM6SF1-202ENST00000322019 TP53AIP1Q9HCN2 124 aa14.72□□□□□ -0.05
TM6SF1-202ENST00000322019 C1orf64Q8NEQ6 169 aa14.71□□□□□ -0.05
TM6SF1-202ENST00000322019 SMIM26A0A096LP01 95 aa14.7□□□□□ -0.06
TM6SF1-202ENST00000322019 PRR4Q16378 134 aa14.7□□□□□ -0.06
TM6SF1-202ENST00000322019 KRTAP4-5Q9BYR2 181 aa14.69□□□□□ -0.06
TM6SF1-202ENST00000322019 Q5W150 140 aa14.67□□□□□ -0.06
TM6SF1-202ENST00000322019 CYP4F30PQ9H0H9 118 aa14.65□□□□□ -0.06
TM6SF1-202ENST00000322019 DMBT1Q9UGM3 2413 aaPredicted RBP14.65□□□□□ -0.06
TM6SF1-202ENST00000322019 Q8N9P0 234 aaPredicted RBP14.63□□□□□ -0.07
TM6SF1-202ENST00000322019 C9orf92A6NGG3 77 aa14.62□□□□□ -0.07
TM6SF1-202ENST00000322019 MT1HL1P0DM35 61 aa14.61□□□□□ -0.07
TM6SF1-202ENST00000322019 SPANXA2-OT1Q8N9U9 137 aa14.56□□□□□ -0.08
TM6SF1-202ENST00000322019 KRTAP13-3Q3SY46 172 aa14.56□□□□□ -0.08
TM6SF1-202ENST00000322019 ABCA13Q86UQ4 5058 aa14.53□□□□□ -0.08
TM6SF1-202ENST00000322019 PCOTHQ58A44 107 aa14.5□□□□□ -0.09
TM6SF1-202ENST00000322019 BIRC6Q9NR09 4857 aa14.48□□□□□ -0.09
TM6SF1-202ENST00000322019 MPLKIPQ8TAP9 179 aa14.46□□□□□ -0.09
TM6SF1-202ENST00000322019 IGLV7-46A0A075B6I9 117 aa14.42□□□□□ -0.1
TM6SF1-202ENST00000322019 SVIPQ8NHG7 77 aa14.41□□□□□ -0.1
TM6SF1-202ENST00000322019 HERC2O95714 4834 aa14.38□□□□□ -0.11
TM6SF1-202ENST00000322019 LOC101927531A0A1B0GV80 90 aa14.35□□□□□ -0.11
TM6SF1-202ENST00000322019 C20orf166-AS1Q96NR2 134 aa14.32□□□□□ -0.12
TM6SF1-202ENST00000322019 A8MUU9 505 aa14.3□□□□□ -0.12
TM6SF1-202ENST00000322019 Q1T7F1 81 aa14.27□□□□□ -0.12
TM6SF1-202ENST00000322019 IGKV2D-30A0A075B6S6 120 aa14.27□□□□□ -0.13
TM6SF1-202ENST00000322019 IGKV2-30P06310 120 aa14.27□□□□□ -0.13
TM6SF1-202ENST00000322019 COA5Q86WW8 74 aa14.25□□□□□ -0.13
TM6SF1-202ENST00000322019 HRES1P13985 223 aa14.15□□□□□ -0.14
TM6SF1-202ENST00000322019 Q75L30 129 aa14.14□□□□□ -0.15
TM6SF1-202ENST00000322019 XP32Q5T750 250 aa14.11□□□□□ -0.15
TM6SF1-202ENST00000322019 PSPHP1O15172 72 aa14.1□□□□□ -0.15
TM6SF1-202ENST00000322019 LPAP08519 4548 aa14.08□□□□□ -0.16
TM6SF1-202ENST00000322019 J3QL48 77 aa14.06□□□□□ -0.16
TM6SF1-202ENST00000322019 C7orf65Q6ZTY9 151 aa14.06□□□□□ -0.16
TM6SF1-202ENST00000322019 V9GYY9 64 aa14.05□□□□□ -0.16
TM6SF1-202ENST00000322019 A8MUN3 132 aa14.03□□□□□ -0.16
TM6SF1-202ENST00000322019 PCLOQ9Y6V0 5065 aa14.03□□□□□ -0.16
TM6SF1-202ENST00000322019 RPL37P61927 97 aaKnown RBP14□□□□□ -0.17
TM6SF1-202ENST00000322019 BRK1Q8WUW1 75 aa13.99□□□□□ -0.17
TM6SF1-202ENST00000322019 LRP2P98164 4655 aa13.98□□□□□ -0.17
TM6SF1-202ENST00000322019 ATP11AUNQ6ZP68 121 aa13.97□□□□□ -0.17
TM6SF1-202ENST00000322019 SPINK7P58062 85 aa13.95□□□□□ -0.18
TM6SF1-202ENST00000322019 PRO0628Q9UI54 55 aa13.95□□□□□ -0.18
TM6SF1-202ENST00000322019 Q5VV11 94 aa13.95□□□□□ -0.18
TM6SF1-202ENST00000322019 DMAC1Q96GE9 116 aa13.95□□□□□ -0.18
TM6SF1-202ENST00000322019 TPRXLQ17RH7 258 aa13.91□□□□□ -0.18
TM6SF1-202ENST00000322019 PRR15LQ9BU68 103 aa13.91□□□□□ -0.18
TM6SF1-202ENST00000322019 ACYP2P14621 99 aa13.91□□□□□ -0.18
TM6SF1-202ENST00000322019 LINC01558Q9Y6Z2 57 aa13.84□□□□□ -0.19
TM6SF1-202ENST00000322019 CHKB-CPT1BH3BT56 60 aa13.76□□□□□ -0.21
TM6SF1-202ENST00000322019 HERC1Q15751 4861 aa13.76□□□□□ -0.21
TM6SF1-202ENST00000322019 KRTAP3-1Q9BYR8 98 aa13.7□□□□□ -0.22
TM6SF1-202ENST00000322019 A8MU10 97 aa13.68□□□□□ -0.22
TM6SF1-202ENST00000322019 A6NED7 52 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms