RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 LINC00483Q53H64 154 aa7.63□□□□□ -1.19
DNMT3A-202ENST00000321117 SPINT4Q6UDR6 99 aa7.63□□□□□ -1.19
DNMT3A-202ENST00000321117 PLAC8Q9NZF1 115 aa7.63□□□□□ -1.19
DNMT3A-202ENST00000321117 TENM4Q6N022 2769 aa7.62□□□□□ -1.19
DNMT3A-202ENST00000321117 VPS13CQ709C8 3753 aa7.61□□□□□ -1.19
DNMT3A-202ENST00000321117 PRAC1Q96KF2 57 aa7.6□□□□□ -1.19
DNMT3A-202ENST00000321117 ZFHX3Q15911 3703 aa7.6□□□□□ -1.19
DNMT3A-202ENST00000321117 PLA2G1BP04054 148 aaKnown RBP7.6□□□□□ -1.19
DNMT3A-202ENST00000321117 A0A087X002 238 aa7.59□□□□□ -1.19
DNMT3A-202ENST00000321117 NOTCH2NLQ7Z3S9 236 aa7.59□□□□□ -1.19
DNMT3A-202ENST00000321117 PKD1L1Q8TDX9 2849 aa7.59□□□□□ -1.19
DNMT3A-202ENST00000321117 Q5W150 140 aa7.57□□□□□ -1.2
DNMT3A-202ENST00000321117 KRTAP13-1Q8IUC0 172 aa7.57□□□□□ -1.2
DNMT3A-202ENST00000321117 LINC01554Q52M75 96 aa7.56□□□□□ -1.2
DNMT3A-202ENST00000321117 OTOGQ6ZRI0 2925 aa7.54□□□□□ -1.2
DNMT3A-202ENST00000321117 H3BS24 57 aa7.53□□□□□ -1.2
DNMT3A-202ENST00000321117 Q6ZRN7 208 aaPredicted RBP7.51□□□□□ -1.21
DNMT3A-202ENST00000321117 Q8N1X5 172 aa7.51□□□□□ -1.21
DNMT3A-202ENST00000321117 DMAC1Q96GE9 116 aa7.51□□□□□ -1.21
DNMT3A-202ENST00000321117 A6NN06 94 aa7.49□□□□□ -1.21
DNMT3A-202ENST00000321117 CRIPTQ9P021 101 aa7.48□□□□□ -1.21
DNMT3A-202ENST00000321117 NBPF19A0A087WUL8 3843 aa7.48□□□□□ -1.21
DNMT3A-202ENST00000321117 LINC00304Q8N9R0 145 aa7.47□□□□□ -1.21
DNMT3A-202ENST00000321117 FBN1P35555 2871 aaKnown RBP7.46□□□□□ -1.22
DNMT3A-202ENST00000321117 FLG2Q5D862 2391 aaPredicted RBP7.43□□□□□ -1.22
DNMT3A-202ENST00000321117 C9orf92A6NGG3 77 aa7.42□□□□□ -1.22
DNMT3A-202ENST00000321117 ASB16-AS1Q495Z4 193 aa7.42□□□□□ -1.22
DNMT3A-202ENST00000321117 CSAG1Q6PB30 78 aa7.38□□□□□ -1.23
DNMT3A-202ENST00000321117 ANK3Q12955 4377 aaKnown RBP7.37□□□□□ -1.23
DNMT3A-202ENST00000321117 DMBT1Q9UGM3 2413 aaPredicted RBP7.36□□□□□ -1.23
DNMT3A-202ENST00000321117 KRTAP10-2P60368 255 aa7.34□□□□□ -1.23
DNMT3A-202ENST00000321117 SPATA8Q6RVD6 105 aa7.34□□□□□ -1.23
DNMT3A-202ENST00000321117 SMR3BP02814 79 aaPredicted RBP7.33□□□□□ -1.24
DNMT3A-202ENST00000321117 TRRAPQ9Y4A5 3859 aa7.33□□□□□ -1.24
DNMT3A-202ENST00000321117 A0A1B0GU33 70 aa7.31□□□□□ -1.24
DNMT3A-202ENST00000321117 SRRM2Q9UQ35 2752 aaKnown RBP7.3□□□□□ -1.24
DNMT3A-202ENST00000321117 KRTAP10-1P60331 282 aa7.29□□□□□ -1.24
DNMT3A-202ENST00000321117 ZNF469Q96JG9 3925 aaPredicted RBP7.29□□□□□ -1.24
DNMT3A-202ENST00000321117 TENM2Q9NT68 2774 aa7.28□□□□□ -1.24
DNMT3A-202ENST00000321117 KRTAP13-2Q52LG2 175 aa7.27□□□□□ -1.25
DNMT3A-202ENST00000321117 ADM2Q7Z4H4 148 aa7.26□□□□□ -1.25
DNMT3A-202ENST00000321117 A0A0D9SG42 100 aa7.24□□□□□ -1.25
DNMT3A-202ENST00000321117 AKAP9Q99996 3911 aa7.23□□□□□ -1.25
DNMT3A-202ENST00000321117 LUZP6Q538Z0 58 aa7.2□□□□□ -1.26
DNMT3A-202ENST00000321117 TGP01266 2768 aa7.19□□□□□ -1.26
DNMT3A-202ENST00000321117 KRTAP13-3Q3SY46 172 aa7.15□□□□□ -1.26
DNMT3A-202ENST00000321117 COX6B2Q6YFQ2 88 aa7.13□□□□□ -1.27
DNMT3A-202ENST00000321117 H1FX-AS1Q4G0G2 97 aa7.12□□□□□ -1.27
DNMT3A-202ENST00000321117 KRTAP16-1A8MUX0 517 aa7.07□□□□□ -1.28
DNMT3A-202ENST00000321117 KRTAP1-4P0C5Y4 121 aa7.04□□□□□ -1.28
DNMT3A-202ENST00000321117 RPS29P62273 56 aaKnown RBP7.04□□□□□ -1.28
DNMT3A-202ENST00000321117 Q6ZSA8 131 aa7.02□□□□□ -1.29
DNMT3A-202ENST00000321117 J3QL48 77 aa7.01□□□□□ -1.29
DNMT3A-202ENST00000321117 FBN3Q75N90 2809 aa7□□□□□ -1.29
DNMT3A-202ENST00000321117 RPL37P61927 97 aaKnown RBP6.99□□□□□ -1.29
DNMT3A-202ENST00000321117 CAMK2N1Q7Z7J9 78 aa6.98□□□□□ -1.29
DNMT3A-202ENST00000321117 KRTAP25-1Q3LHN0 102 aa6.98□□□□□ -1.29
DNMT3A-202ENST00000321117 COL7A1Q02388 2944 aa6.97□□□□□ -1.29
DNMT3A-202ENST00000321117 ROMO1P60602 79 aa6.96□□□□□ -1.29
DNMT3A-202ENST00000321117 A0A0A0MQY5 61 aa6.95□□□□□ -1.3
DNMT3A-202ENST00000321117 S4R3F8 94 aa6.95□□□□□ -1.3
DNMT3A-202ENST00000321117 A8MUU9 505 aa6.94□□□□□ -1.3
DNMT3A-202ENST00000321117 MEGF8Q7Z7M0 2845 aa6.92□□□□□ -1.3
DNMT3A-202ENST00000321117 C20orf166-AS1Q96NR2 134 aa6.92□□□□□ -1.3
DNMT3A-202ENST00000321117 H0YAA0 97 aa6.91□□□□□ -1.3
DNMT3A-202ENST00000321117 CSMD3Q7Z407 3707 aa6.82□□□□□ -1.32
DNMT3A-202ENST00000321117 HUWE1Q7Z6Z7 4374 aaKnown RBP6.81□□□□□ -1.32
DNMT3A-202ENST00000321117 R4GN34 69 aa6.81□□□□□ -1.32
DNMT3A-202ENST00000321117 NDUFAF8A1L188 74 aa6.77□□□□□ -1.33
DNMT3A-202ENST00000321117 Q5VSD8 79 aa6.75□□□□□ -1.33
DNMT3A-202ENST00000321117 M0QZ58 72 aa6.67□□□□□ -1.34
DNMT3A-202ENST00000321117 DNAH10Q8IVF4 4471 aa6.66□□□□□ -1.34
DNMT3A-202ENST00000321117 KRTAP3-1Q9BYR8 98 aa6.65□□□□□ -1.34
DNMT3A-202ENST00000321117 M0R2T5 61 aa6.62□□□□□ -1.35
DNMT3A-202ENST00000321117 SEC61BP60468 96 aaKnown RBP6.6□□□□□ -1.35
DNMT3A-202ENST00000321117 C10orf95Q9H7T3 257 aa6.59□□□□□ -1.35
DNMT3A-202ENST00000321117 XP32Q5T750 250 aa6.57□□□□□ -1.36
DNMT3A-202ENST00000321117 DNAH9Q9NYC9 4486 aa6.54□□□□□ -1.36
DNMT3A-202ENST00000321117 P0C880 135 aa6.54□□□□□ -1.36
DNMT3A-202ENST00000321117 PLECQ15149 4684 aaKnown RBP6.52□□□□□ -1.37
DNMT3A-202ENST00000321117 DNAH1Q9P2D7 4330 aa6.47□□□□□ -1.37
DNMT3A-202ENST00000321117 ANK2Q01484 3957 aa6.46□□□□□ -1.38
DNMT3A-202ENST00000321117 PLAC4Q8WY50 150 aa6.44□□□□□ -1.38
DNMT3A-202ENST00000321117 A0A1B0GVY2 172 aa6.44□□□□□ -1.38
DNMT3A-202ENST00000321117 KRTAP10-6P60371 365 aaPredicted RBP6.42□□□□□ -1.38
DNMT3A-202ENST00000321117 KRTAP10-8P60410 259 aa6.42□□□□□ -1.38
DNMT3A-202ENST00000321117 KRTAP13-4Q3LI77 160 aa6.4□□□□□ -1.38
DNMT3A-202ENST00000321117 TPRXLQ17RH7 258 aa6.39□□□□□ -1.39
DNMT3A-202ENST00000321117 KRTAP21-3Q3LHN1 58 aa6.39□□□□□ -1.39
DNMT3A-202ENST00000321117 VPS13DQ5THJ4 4388 aa6.38□□□□□ -1.39
DNMT3A-202ENST00000321117 KRTAP12-2P59991 146 aa6.37□□□□□ -1.39
DNMT3A-202ENST00000321117 DNAH8Q96JB1 4490 aa6.37□□□□□ -1.39
DNMT3A-202ENST00000321117 DNAH17Q9UFH2 4485 aa6.36□□□□□ -1.39
DNMT3A-202ENST00000321117 DNAH11Q96DT5 4516 aa6.35□□□□□ -1.39
DNMT3A-202ENST00000321117 DNAH3Q8TD57 4116 aa6.35□□□□□ -1.39
DNMT3A-202ENST00000321117 STARD9Q9P2P6 4700 aa6.32□□□□□ -1.4
DNMT3A-202ENST00000321117 KRTAP12-1P59990 96 aa6.31□□□□□ -1.4
DNMT3A-202ENST00000321117 KRTAP3-3Q9BYR6 98 aa6.3□□□□□ -1.4
DNMT3A-202ENST00000321117 LYSTQ99698 3801 aa6.29□□□□□ -1.4
DNMT3A-202ENST00000321117 KRTAP3-2Q9BYR7 98 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms