RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 FAT2Q9NYQ8 4349 aa8.06□□□□□ -1.12
CPNE1-201ENST00000317677 LINC01558Q9Y6Z2 57 aa8.05□□□□□ -1.12
CPNE1-201ENST00000317677 KRTAP29-1A8MX34 341 aaPredicted RBP8.04□□□□□ -1.12
CPNE1-201ENST00000317677 PRLHP81277 87 aa8.04□□□□□ -1.12
CPNE1-201ENST00000317677 IGLV7-46A0A075B6I9 117 aa8.02□□□□□ -1.13
CPNE1-201ENST00000317677 PKD1P98161 4303 aa8.02□□□□□ -1.13
CPNE1-201ENST00000317677 H0Y9P7 68 aa8.01□□□□□ -1.13
CPNE1-201ENST00000317677 COA5Q86WW8 74 aa8.01□□□□□ -1.13
CPNE1-201ENST00000317677 IGLV5-52A0A0A0MRZ9 124 aa8.01□□□□□ -1.13
CPNE1-201ENST00000317677 KRTAP10-2P60368 255 aa8□□□□□ -1.13
CPNE1-201ENST00000317677 KRTAP13-1Q8IUC0 172 aa7.97□□□□□ -1.13
CPNE1-201ENST00000317677 SRRM2Q9UQ35 2752 aaKnown RBP7.96□□□□□ -1.13
CPNE1-201ENST00000317677 WFDC13Q8IUB5 93 aa7.96□□□□□ -1.14
CPNE1-201ENST00000317677 A0A1B0GVY2 172 aa7.95□□□□□ -1.14
CPNE1-201ENST00000317677 H0Y9J4 135 aa7.95□□□□□ -1.14
CPNE1-201ENST00000317677 A0A087X002 238 aa7.95□□□□□ -1.14
CPNE1-201ENST00000317677 ASB16-AS1Q495Z4 193 aa7.95□□□□□ -1.14
CPNE1-201ENST00000317677 DEFB116Q30KQ4 102 aa7.93□□□□□ -1.14
CPNE1-201ENST00000317677 CASC2Q6XLA1 102 aa7.92□□□□□ -1.14
CPNE1-201ENST00000317677 IGLV8-61A0A075B6I0 122 aa7.9□□□□□ -1.14
CPNE1-201ENST00000317677 PSORS1C2Q9UIG4 136 aa7.9□□□□□ -1.14
CPNE1-201ENST00000317677 PKHD1P08F94 4074 aa7.9□□□□□ -1.15
CPNE1-201ENST00000317677 PLA2G1BP04054 148 aaKnown RBP7.9□□□□□ -1.15
CPNE1-201ENST00000317677 LINC00313P59037 77 aa7.9□□□□□ -1.15
CPNE1-201ENST00000317677 A0A0G2JQZ4 141 aa7.89□□□□□ -1.15
CPNE1-201ENST00000317677 SPINK7P58062 85 aa7.89□□□□□ -1.15
CPNE1-201ENST00000317677 KRTAP10-1P60331 282 aa7.89□□□□□ -1.15
CPNE1-201ENST00000317677 SPRR1BP22528 89 aa7.88□□□□□ -1.15
CPNE1-201ENST00000317677 H3BS24 57 aa7.88□□□□□ -1.15
CPNE1-201ENST00000317677 LINC01554Q52M75 96 aa7.88□□□□□ -1.15
CPNE1-201ENST00000317677 LRP1BQ9NZR2 4599 aa7.87□□□□□ -1.15
CPNE1-201ENST00000317677 SPAG11AQ6PDA7 123 aa7.87□□□□□ -1.15
CPNE1-201ENST00000317677 IGFL1Q6UW32 110 aa7.87□□□□□ -1.15
CPNE1-201ENST00000317677 Q6ZSA8 131 aa7.86□□□□□ -1.15
CPNE1-201ENST00000317677 CIRBP-AS1Q8TBR5 109 aa7.86□□□□□ -1.15
CPNE1-201ENST00000317677 HERC2O95714 4834 aa7.86□□□□□ -1.15
CPNE1-201ENST00000317677 DYNC1H1Q14204 4646 aaKnown RBP7.85□□□□□ -1.15
CPNE1-201ENST00000317677 A8MWP4 228 aa7.85□□□□□ -1.15
CPNE1-201ENST00000317677 KIAA1109Q2LD37 5005 aa7.84□□□□□ -1.15
CPNE1-201ENST00000317677 A0A087WSZ3 146 aa7.82□□□□□ -1.16
CPNE1-201ENST00000317677 RPL37AP61513 92 aaKnown RBP7.82□□□□□ -1.16
CPNE1-201ENST00000317677 TP53AIP1Q9HCN2 124 aa7.81□□□□□ -1.16
CPNE1-201ENST00000317677 ZNF861PO60384 105 aa7.8□□□□□ -1.16
CPNE1-201ENST00000317677 LINC00472Q9H8W2 130 aa7.8□□□□□ -1.16
CPNE1-201ENST00000317677 LINC00483Q53H64 154 aa7.79□□□□□ -1.16
CPNE1-201ENST00000317677 HRES1P13985 223 aa7.79□□□□□ -1.16
CPNE1-201ENST00000317677 IGLV7-43P04211 117 aa7.78□□□□□ -1.16
CPNE1-201ENST00000317677 PRAC1Q96KF2 57 aa7.78□□□□□ -1.16
CPNE1-201ENST00000317677 CDK2AP2O75956 126 aa7.77□□□□□ -1.17
CPNE1-201ENST00000317677 RYR1P21817 5038 aa7.76□□□□□ -1.17
CPNE1-201ENST00000317677 MMP24-AS1A0A0U1RRL7 71 aa7.76□□□□□ -1.17
CPNE1-201ENST00000317677 ANAPC11Q9NYG5 84 aa7.76□□□□□ -1.17
CPNE1-201ENST00000317677 PCOTHQ58A44 107 aa7.73□□□□□ -1.17
CPNE1-201ENST00000317677 IGLV9-49A0A0B4J1Y8 123 aa7.73□□□□□ -1.17
CPNE1-201ENST00000317677 ZNF706Q9Y5V0 76 aaPredicted RBP7.72□□□□□ -1.17
CPNE1-201ENST00000317677 PRR26Q8N8Z3 221 aa7.71□□□□□ -1.18
CPNE1-201ENST00000317677 PCLOQ9Y6V0 5065 aa7.7□□□□□ -1.18
CPNE1-201ENST00000317677 ADM2Q7Z4H4 148 aa7.7□□□□□ -1.18
CPNE1-201ENST00000317677 HSPG2P98160 4391 aa7.7□□□□□ -1.18
CPNE1-201ENST00000317677 APOBP04114 4563 aaKnown RBP7.69□□□□□ -1.18
CPNE1-201ENST00000317677 SPATA8Q6RVD6 105 aa7.69□□□□□ -1.18
CPNE1-201ENST00000317677 KRTAP17-1Q9BYP8 105 aa7.68□□□□□ -1.18
CPNE1-201ENST00000317677 VPS13BQ7Z7G8 4022 aa7.68□□□□□ -1.18
CPNE1-201ENST00000317677 Q8N1X5 172 aa7.66□□□□□ -1.18
CPNE1-201ENST00000317677 ABCA13Q86UQ4 5058 aa7.64□□□□□ -1.19
CPNE1-201ENST00000317677 RETNLBQ9BQ08 111 aa7.62□□□□□ -1.19
CPNE1-201ENST00000317677 FAT1Q14517 4588 aa7.61□□□□□ -1.19
CPNE1-201ENST00000317677 KRTAP4-5Q9BYR2 181 aa7.61□□□□□ -1.19
CPNE1-201ENST00000317677 KRTAP1-4P0C5Y4 121 aa7.6□□□□□ -1.19
CPNE1-201ENST00000317677 ACYP2P14621 99 aa7.6□□□□□ -1.19
CPNE1-201ENST00000317677 KRTAP13-2Q52LG2 175 aa7.6□□□□□ -1.19
CPNE1-201ENST00000317677 Q96NJ1 140 aa7.6□□□□□ -1.19
CPNE1-201ENST00000317677 C8orf17Q9NRJ1 99 aa7.6□□□□□ -1.19
CPNE1-201ENST00000317677 SMR3BP02814 79 aaPredicted RBP7.57□□□□□ -1.2
CPNE1-201ENST00000317677 KRTAP10-4P60372 401 aaPredicted RBP7.55□□□□□ -1.2
CPNE1-201ENST00000317677 FAM229AH3BQW9 127 aa7.54□□□□□ -1.2
CPNE1-201ENST00000317677 Q5VSD8 79 aa7.54□□□□□ -1.2
CPNE1-201ENST00000317677 A0A1B0GU69 56 aa7.53□□□□□ -1.2
CPNE1-201ENST00000317677 MIR22HGQ0VDD5 57 aa7.53□□□□□ -1.2
CPNE1-201ENST00000317677 SSBP3-AS1Q7Z2R9 100 aa7.53□□□□□ -1.2
CPNE1-201ENST00000317677 MRPL34Q9BQ48 92 aaKnown RBP7.53□□□□□ -1.2
CPNE1-201ENST00000317677 UQCR11O14957 56 aa7.53□□□□□ -1.2
CPNE1-201ENST00000317677 CSAG1Q6PB30 78 aa7.53□□□□□ -1.2
CPNE1-201ENST00000317677 A0A1B0GVX0 72 aa7.51□□□□□ -1.21
CPNE1-201ENST00000317677 DMAC1Q96GE9 116 aa7.5□□□□□ -1.21
CPNE1-201ENST00000317677 KRTAP13-3Q3SY46 172 aa7.49□□□□□ -1.21
CPNE1-201ENST00000317677 SPINK6Q6UWN8 80 aa7.49□□□□□ -1.21
CPNE1-201ENST00000317677 PKHD1L1Q86WI1 4243 aa7.45□□□□□ -1.22
CPNE1-201ENST00000317677 DMBT1Q9UGM3 2413 aaPredicted RBP7.45□□□□□ -1.22
CPNE1-201ENST00000317677 FLG2Q5D862 2391 aaPredicted RBP7.44□□□□□ -1.22
CPNE1-201ENST00000317677 IGHV6-1A0A0B4J1U7 121 aa7.44□□□□□ -1.22
CPNE1-201ENST00000317677 NOTCH2NLQ7Z3S9 236 aa7.42□□□□□ -1.22
CPNE1-201ENST00000317677 TYMSOSQ8TAI1 123 aa7.41□□□□□ -1.22
CPNE1-201ENST00000317677 Q5W150 140 aa7.4□□□□□ -1.22
CPNE1-201ENST00000317677 ROMO1P60602 79 aa7.37□□□□□ -1.23
CPNE1-201ENST00000317677 J3QL48 77 aa7.35□□□□□ -1.23
CPNE1-201ENST00000317677 MYCBP2O75592 4640 aa7.35□□□□□ -1.23
CPNE1-201ENST00000317677 KRTAP25-1Q3LHN0 102 aa7.33□□□□□ -1.24
CPNE1-201ENST00000317677 LINC00304Q8N9R0 145 aa7.32□□□□□ -1.24
CPNE1-201ENST00000317677 SPINK1P00995 79 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms