RNA–Protein interactions for RNA: ENST00000317623.8

PCNX4-201, Transcript of pecanex 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCNX4, Length 17,339 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-201ENST00000317623 KRTAP7-1Q8IUC3 87 aa3.68□□□□□ -1.82
PCNX4-201ENST00000317623 TENM1Q9UKZ4 2725 aa3.67□□□□□ -1.82
PCNX4-201ENST00000317623 UTRNP46939 3433 aa3.67□□□□□ -1.82
PCNX4-201ENST00000317623 WDFY4Q6ZS81 3184 aa3.66□□□□□ -1.82
PCNX4-201ENST00000317623 ZZEF1O43149 2961 aa3.66□□□□□ -1.82
PCNX4-201ENST00000317623 ADGRG4Q8IZF6 3080 aa3.65□□□□□ -1.83
PCNX4-201ENST00000317623 TNP1P09430 55 aa3.65□□□□□ -1.83
PCNX4-201ENST00000317623 ATMQ13315 3056 aa3.64□□□□□ -1.83
PCNX4-201ENST00000317623 RPS29P62273 56 aaKnown RBP3.64□□□□□ -1.83
PCNX4-201ENST00000317623 KRTAP13-1Q8IUC0 172 aa3.63□□□□□ -1.83
PCNX4-201ENST00000317623 DMXL1Q9Y485 3027 aa3.63□□□□□ -1.83
PCNX4-201ENST00000317623 HTTP42858 3142 aa3.62□□□□□ -1.83
PCNX4-201ENST00000317623 RANBP2P49792 3224 aaKnown RBP3.62□□□□□ -1.83
PCNX4-201ENST00000317623 KRTAP10-2P60368 255 aa3.62□□□□□ -1.83
PCNX4-201ENST00000317623 LAMA1P25391 3075 aa3.61□□□□□ -1.83
PCNX4-201ENST00000317623 ZANQ9Y493 2812 aa3.59□□□□□ -1.83
PCNX4-201ENST00000317623 VWFP04275 2813 aa3.59□□□□□ -1.83
PCNX4-201ENST00000317623 REV3LO60673 3130 aa3.59□□□□□ -1.84
PCNX4-201ENST00000317623 FBN2P35556 2912 aa3.58□□□□□ -1.84
PCNX4-201ENST00000317623 KRTAP10-8P60410 259 aa3.58□□□□□ -1.84
PCNX4-201ENST00000317623 KRTAP13-2Q52LG2 175 aa3.58□□□□□ -1.84
PCNX4-201ENST00000317623 BOD1L1Q8NFC6 3051 aa3.58□□□□□ -1.84
PCNX4-201ENST00000317623 TNRC18O15417 2968 aaPredicted RBP3.55□□□□□ -1.84
PCNX4-201ENST00000317623 Q6ZRN7 208 aaPredicted RBP3.55□□□□□ -1.84
PCNX4-201ENST00000317623 Q5VSD8 79 aa3.55□□□□□ -1.84
PCNX4-201ENST00000317623 PKD1L1Q8TDX9 2849 aa3.55□□□□□ -1.84
PCNX4-201ENST00000317623 TENM4Q6N022 2769 aa3.54□□□□□ -1.84
PCNX4-201ENST00000317623 ZFHX3Q15911 3703 aa3.54□□□□□ -1.84
PCNX4-201ENST00000317623 CELSR1Q9NYQ6 3014 aa3.53□□□□□ -1.84
PCNX4-201ENST00000317623 UNC80Q8N2C7 3258 aa3.52□□□□□ -1.85
PCNX4-201ENST00000317623 MKI67P46013 3256 aaKnown RBP3.52□□□□□ -1.85
PCNX4-201ENST00000317623 CFAP47Q6ZTR5 3102 aa3.52□□□□□ -1.85
PCNX4-201ENST00000317623 CELSR3Q9NYQ7 3312 aa3.5□□□□□ -1.85
PCNX4-201ENST00000317623 XIRP2A4UGR9 3374 aa3.49□□□□□ -1.85
PCNX4-201ENST00000317623 COL6A3P12111 3177 aa3.47□□□□□ -1.85
PCNX4-201ENST00000317623 TPRXLQ17RH7 258 aa3.45□□□□□ -1.86
PCNX4-201ENST00000317623 MXRA5Q9NR99 2828 aa3.44□□□□□ -1.86
PCNX4-201ENST00000317623 TENM2Q9NT68 2774 aa3.44□□□□□ -1.86
PCNX4-201ENST00000317623 DNAH14Q0VDD8 3507 aa3.41□□□□□ -1.86
PCNX4-201ENST00000317623 VCANP13611 3396 aa3.4□□□□□ -1.86
PCNX4-201ENST00000317623 KRTAP13-3Q3SY46 172 aa3.4□□□□□ -1.86
PCNX4-201ENST00000317623 KRTAP12-2P59991 146 aa3.4□□□□□ -1.87
PCNX4-201ENST00000317623 KRTAP15-1Q3LI76 137 aa3.36□□□□□ -1.87
PCNX4-201ENST00000317623 COL7A1Q02388 2944 aa3.36□□□□□ -1.87
PCNX4-201ENST00000317623 USP34Q70CQ2 3546 aa3.34□□□□□ -1.87
PCNX4-201ENST00000317623 MYO15AQ9UKN7 3530 aa3.34□□□□□ -1.87
PCNX4-201ENST00000317623 SPTBN5Q9NRC6 3674 aaKnown RBP3.34□□□□□ -1.88
PCNX4-201ENST00000317623 KRTAP13-4Q3LI77 160 aa3.33□□□□□ -1.88
PCNX4-201ENST00000317623 INE1O15225 51 aa3.33□□□□□ -1.88
PCNX4-201ENST00000317623 NBPF19A0A087WUL8 3843 aa3.33□□□□□ -1.88
PCNX4-201ENST00000317623 KRTAP12-1P59990 96 aa3.33□□□□□ -1.88
PCNX4-201ENST00000317623 OTOGQ6ZRI0 2925 aa3.32□□□□□ -1.88
PCNX4-201ENST00000317623 HRNRQ86YZ3 2850 aaPredicted RBP3.32□□□□□ -1.88
PCNX4-201ENST00000317623 KRTAP1-4P0C5Y4 121 aa3.32□□□□□ -1.88
PCNX4-201ENST00000317623 XP32Q5T750 250 aa3.32□□□□□ -1.88
PCNX4-201ENST00000317623 MEGF8Q7Z7M0 2845 aa3.31□□□□□ -1.88
PCNX4-201ENST00000317623 SZT2Q5T011 3432 aa3.31□□□□□ -1.88
PCNX4-201ENST00000317623 LAMA3Q16787 3333 aa3.29□□□□□ -1.88
PCNX4-201ENST00000317623 BRCA2P51587 3418 aa3.28□□□□□ -1.88
PCNX4-201ENST00000317623 CDH23Q9H251 3354 aa3.28□□□□□ -1.88
PCNX4-201ENST00000317623 FBN3Q75N90 2809 aa3.28□□□□□ -1.88
PCNX4-201ENST00000317623 DMDP11532 3685 aa3.26□□□□□ -1.89
PCNX4-201ENST00000317623 A0A1B0GVY2 172 aa3.26□□□□□ -1.89
PCNX4-201ENST00000317623 PRO2289Q9P1D8 64 aa3.25□□□□□ -1.89
PCNX4-201ENST00000317623 AKAP9Q99996 3911 aa3.25□□□□□ -1.89
PCNX4-201ENST00000317623 FBN1P35555 2871 aaKnown RBP3.23□□□□□ -1.89
PCNX4-201ENST00000317623 SMG1Q96Q15 3661 aaKnown RBP3.21□□□□□ -1.9
PCNX4-201ENST00000317623 KRTAP3-1Q9BYR8 98 aa3.21□□□□□ -1.9
PCNX4-201ENST00000317623 KRTAP10-10P60014 251 aa3.21□□□□□ -1.9
PCNX4-201ENST00000317623 SPEGQ15772 3267 aa3.21□□□□□ -1.9
PCNX4-201ENST00000317623 KRTAP10-6P60371 365 aaPredicted RBP3.19□□□□□ -1.9
PCNX4-201ENST00000317623 ALMS1Q8TCU4 4167 aa3.18□□□□□ -1.9
PCNX4-201ENST00000317623 LOC400499M0QZD8 3231 aa3.17□□□□□ -1.9
PCNX4-201ENST00000317623 EYSQ5T1H1 3165 aa3.17□□□□□ -1.9
PCNX4-201ENST00000317623 SPENQ96T58 3664 aaKnown RBP3.14□□□□□ -1.91
PCNX4-201ENST00000317623 WDFY3Q8IZQ1 3526 aa3.14□□□□□ -1.91
PCNX4-201ENST00000317623 LAMA5O15230 3695 aa3.13□□□□□ -1.91
PCNX4-201ENST00000317623 DCHS1Q96JQ0 3298 aa3.1□□□□□ -1.91
PCNX4-201ENST00000317623 ASPMQ8IZT6 3477 aa3.1□□□□□ -1.91
PCNX4-201ENST00000317623 VPS13CQ709C8 3753 aa3.09□□□□□ -1.92
PCNX4-201ENST00000317623 ZFHX4Q86UP3 3567 aa3.09□□□□□ -1.92
PCNX4-201ENST00000317623 TRRAPQ9Y4A5 3859 aa3.08□□□□□ -1.92
PCNX4-201ENST00000317623 KRTAP3-2Q9BYR7 98 aa3.07□□□□□ -1.92
PCNX4-201ENST00000317623 BSNQ9UPA5 3926 aa3.05□□□□□ -1.92
PCNX4-201ENST00000317623 RELNP78509 3460 aa3.04□□□□□ -1.92
PCNX4-201ENST00000317623 CSMD3Q7Z407 3707 aa3.03□□□□□ -1.92
PCNX4-201ENST00000317623 KRTAP23-1A1A580 65 aa3.02□□□□□ -1.93
PCNX4-201ENST00000317623 CSMD1Q96PZ7 3565 aa3□□□□□ -1.93
PCNX4-201ENST00000317623 KRTAP3-3Q9BYR6 98 aa2.99□□□□□ -1.93
PCNX4-201ENST00000317623 CUBNO60494 3623 aa2.98□□□□□ -1.93
PCNX4-201ENST00000317623 SVEP1Q4LDE5 3571 aa2.94□□□□□ -1.94
PCNX4-201ENST00000317623 DNAH3Q8TD57 4116 aa2.91□□□□□ -1.94
PCNX4-201ENST00000317623 CMYA5Q8N3K9 4069 aa2.9□□□□□ -1.95
PCNX4-201ENST00000317623 KRTAP10-12P60413 245 aa2.9□□□□□ -1.95
PCNX4-201ENST00000317623 KRTAP12-3P60328 96 aa2.9□□□□□ -1.95
PCNX4-201ENST00000317623 LYSTQ99698 3801 aa2.89□□□□□ -1.95
PCNX4-201ENST00000317623 ANK2Q01484 3957 aa2.84□□□□□ -1.95
PCNX4-201ENST00000317623 LCE3AQ5TA76 89 aa2.82□□□□□ -1.96
PCNX4-201ENST00000317623 DNAH6Q9C0G6 4158 aa2.81□□□□□ -1.96
PCNX4-201ENST00000317623 HECTD4Q9Y4D8 3996 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms