RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 TRAV22A0A0B4J277 110 aa8.44□□□□□ -1.06
VRK3-201ENST00000316763 SMR3BP02814 79 aaPredicted RBP8.43□□□□□ -1.06
VRK3-201ENST00000316763 CYP4F30PQ9H0H9 118 aa8.42□□□□□ -1.06
VRK3-201ENST00000316763 ANAPC11Q9NYG5 84 aa8.42□□□□□ -1.06
VRK3-201ENST00000316763 TP53AIP1Q9HCN2 124 aa8.41□□□□□ -1.06
VRK3-201ENST00000316763 C8orf17Q9NRJ1 99 aa8.41□□□□□ -1.06
VRK3-201ENST00000316763 A0A1B0GVX0 72 aa8.4□□□□□ -1.06
VRK3-201ENST00000316763 FAM229BQ4G0N7 80 aa8.39□□□□□ -1.07
VRK3-201ENST00000316763 C1orf64Q8NEQ6 169 aa8.39□□□□□ -1.07
VRK3-201ENST00000316763 ASB16-AS1Q495Z4 193 aa8.39□□□□□ -1.07
VRK3-201ENST00000316763 IGHV6-1A0A0B4J1U7 121 aa8.37□□□□□ -1.07
VRK3-201ENST00000316763 SPANXA2-OT1Q8N9U9 137 aa8.37□□□□□ -1.07
VRK3-201ENST00000316763 HSPG2P98160 4391 aa8.37□□□□□ -1.07
VRK3-201ENST00000316763 KRTAP17-1Q9BYP8 105 aa8.37□□□□□ -1.07
VRK3-201ENST00000316763 KIAA1109Q2LD37 5005 aa8.36□□□□□ -1.07
VRK3-201ENST00000316763 CD164Q04900 197 aa8.36□□□□□ -1.07
VRK3-201ENST00000316763 BIRC6Q9NR09 4857 aa8.35□□□□□ -1.07
VRK3-201ENST00000316763 SSBP3-AS1Q7Z2R9 100 aa8.35□□□□□ -1.07
VRK3-201ENST00000316763 PRR4Q16378 134 aa8.35□□□□□ -1.07
VRK3-201ENST00000316763 RYR1P21817 5038 aa8.34□□□□□ -1.07
VRK3-201ENST00000316763 MPLKIPQ8TAP9 179 aa8.34□□□□□ -1.07
VRK3-201ENST00000316763 VPS13BQ7Z7G8 4022 aa8.33□□□□□ -1.08
VRK3-201ENST00000316763 FAM229AH3BQW9 127 aa8.32□□□□□ -1.08
VRK3-201ENST00000316763 NDUFS5O43920 106 aa8.32□□□□□ -1.08
VRK3-201ENST00000316763 MRPL34Q9BQ48 92 aaKnown RBP8.32□□□□□ -1.08
VRK3-201ENST00000316763 Q8N1X5 172 aa8.31□□□□□ -1.08
VRK3-201ENST00000316763 FAT1Q14517 4588 aa8.3□□□□□ -1.08
VRK3-201ENST00000316763 KRTAP10-4P60372 401 aaPredicted RBP8.29□□□□□ -1.08
VRK3-201ENST00000316763 Q5VSD8 79 aa8.29□□□□□ -1.08
VRK3-201ENST00000316763 SPINK6Q6UWN8 80 aa8.29□□□□□ -1.08
VRK3-201ENST00000316763 PLA2G1BP04054 148 aaKnown RBP8.27□□□□□ -1.09
VRK3-201ENST00000316763 Q1T7F1 81 aa8.27□□□□□ -1.09
VRK3-201ENST00000316763 IGLV7-46A0A075B6I9 117 aa8.25□□□□□ -1.09
VRK3-201ENST00000316763 A0A087X002 238 aa8.24□□□□□ -1.09
VRK3-201ENST00000316763 C8orf87E5RJ46 101 aa8.24□□□□□ -1.09
VRK3-201ENST00000316763 NOTCH2NLQ7Z3S9 236 aa8.24□□□□□ -1.09
VRK3-201ENST00000316763 KRTAP1-4P0C5Y4 121 aa8.23□□□□□ -1.09
VRK3-201ENST00000316763 KRTAP4-5Q9BYR2 181 aa8.23□□□□□ -1.09
VRK3-201ENST00000316763 V9GYY9 64 aa8.23□□□□□ -1.09
VRK3-201ENST00000316763 PCOTHQ58A44 107 aa8.22□□□□□ -1.09
VRK3-201ENST00000316763 PRO0628Q9UI54 55 aa8.21□□□□□ -1.09
VRK3-201ENST00000316763 KRTAP13-2Q52LG2 175 aa8.19□□□□□ -1.1
VRK3-201ENST00000316763 HERC2O95714 4834 aa8.17□□□□□ -1.1
VRK3-201ENST00000316763 LOC101927531A0A1B0GV80 90 aa8.17□□□□□ -1.1
VRK3-201ENST00000316763 BRK1Q8WUW1 75 aa8.16□□□□□ -1.1
VRK3-201ENST00000316763 LINC00313P59037 77 aa8.15□□□□□ -1.1
VRK3-201ENST00000316763 C1orf195Q5TG92 126 aa8.15□□□□□ -1.1
VRK3-201ENST00000316763 COA5Q86WW8 74 aa8.15□□□□□ -1.1
VRK3-201ENST00000316763 LIMD2Q9BT23 127 aa8.15□□□□□ -1.1
VRK3-201ENST00000316763 PSPHP1O15172 72 aa8.11□□□□□ -1.11
VRK3-201ENST00000316763 Q5W150 140 aa8.11□□□□□ -1.11
VRK3-201ENST00000316763 PKHD1L1Q86WI1 4243 aa8.11□□□□□ -1.11
VRK3-201ENST00000316763 C4orf48Q5BLP8 95 aa8.11□□□□□ -1.11
VRK3-201ENST00000316763 KRTAP13-3Q3SY46 172 aa8.1□□□□□ -1.11
VRK3-201ENST00000316763 Q8N9P0 234 aaPredicted RBP8.09□□□□□ -1.11
VRK3-201ENST00000316763 FLG2Q5D862 2391 aaPredicted RBP8.09□□□□□ -1.11
VRK3-201ENST00000316763 A8MUN3 132 aa8.07□□□□□ -1.12
VRK3-201ENST00000316763 PRR26Q8N8Z3 221 aa8.07□□□□□ -1.12
VRK3-201ENST00000316763 TYMSOSQ8TAI1 123 aa8.07□□□□□ -1.12
VRK3-201ENST00000316763 SPINK1P00995 79 aa8.04□□□□□ -1.12
VRK3-201ENST00000316763 HRES1P13985 223 aa8.03□□□□□ -1.12
VRK3-201ENST00000316763 Q5VV11 94 aa8.01□□□□□ -1.13
VRK3-201ENST00000316763 PRR15LQ9BU68 103 aa8.01□□□□□ -1.13
VRK3-201ENST00000316763 ABCA13Q86UQ4 5058 aa8.01□□□□□ -1.13
VRK3-201ENST00000316763 LRP1Q07954 4544 aaKnown RBP8□□□□□ -1.13
VRK3-201ENST00000316763 KRTAP16-1A8MUX0 517 aa7.99□□□□□ -1.13
VRK3-201ENST00000316763 ACYP2P14621 99 aa7.99□□□□□ -1.13
VRK3-201ENST00000316763 MYCBP2O75592 4640 aa7.98□□□□□ -1.13
VRK3-201ENST00000316763 IGKV2-30P06310 120 aa7.97□□□□□ -1.13
VRK3-201ENST00000316763 RETNLBQ9BQ08 111 aa7.97□□□□□ -1.13
VRK3-201ENST00000316763 CHKB-CPT1BH3BT56 60 aa7.97□□□□□ -1.13
VRK3-201ENST00000316763 SPAG11AQ6PDA7 123 aa7.97□□□□□ -1.13
VRK3-201ENST00000316763 LINC00304Q8N9R0 145 aa7.97□□□□□ -1.13
VRK3-201ENST00000316763 LINC01558Q9Y6Z2 57 aa7.97□□□□□ -1.13
VRK3-201ENST00000316763 RPS29P62273 56 aaKnown RBP7.96□□□□□ -1.13
VRK3-201ENST00000316763 FAT3Q8TDW7 4589 aa7.96□□□□□ -1.14
VRK3-201ENST00000316763 KRTAP10-8P60410 259 aa7.95□□□□□ -1.14
VRK3-201ENST00000316763 Q75L30 129 aa7.95□□□□□ -1.14
VRK3-201ENST00000316763 MT1HL1P0DM35 61 aa7.94□□□□□ -1.14
VRK3-201ENST00000316763 DMAC1Q96GE9 116 aa7.93□□□□□ -1.14
VRK3-201ENST00000316763 PCLOQ9Y6V0 5065 aa7.89□□□□□ -1.15
VRK3-201ENST00000316763 TNXBP22105 4242 aa7.89□□□□□ -1.15
VRK3-201ENST00000316763 J3QL48 77 aa7.88□□□□□ -1.15
VRK3-201ENST00000316763 IGKV2D-30A0A075B6S6 120 aa7.88□□□□□ -1.15
VRK3-201ENST00000316763 A6NED7 52 aa7.88□□□□□ -1.15
VRK3-201ENST00000316763 DMBT1Q9UGM3 2413 aaPredicted RBP7.84□□□□□ -1.15
VRK3-201ENST00000316763 C7orf65Q6ZTY9 151 aa7.8□□□□□ -1.16
VRK3-201ENST00000316763 CDC42SE1Q9NRR8 79 aa7.79□□□□□ -1.16
VRK3-201ENST00000316763 LCA10Q71F78 164 aa7.77□□□□□ -1.17
VRK3-201ENST00000316763 A8MU10 97 aa7.76□□□□□ -1.17
VRK3-201ENST00000316763 ATP11AUNQ6ZP68 121 aa7.76□□□□□ -1.17
VRK3-201ENST00000316763 SPINK7P58062 85 aa7.73□□□□□ -1.17
VRK3-201ENST00000316763 PMAIP1Q13794 54 aa7.73□□□□□ -1.17
VRK3-201ENST00000316763 SPTSSBQ8NFR3 76 aa7.72□□□□□ -1.17
VRK3-201ENST00000316763 A0A1B0GU69 56 aa7.72□□□□□ -1.17
VRK3-201ENST00000316763 A8MUU9 505 aa7.72□□□□□ -1.17
VRK3-201ENST00000316763 C20orf166-AS1Q96NR2 134 aa7.72□□□□□ -1.17
VRK3-201ENST00000316763 C9orf92A6NGG3 77 aa7.71□□□□□ -1.18
VRK3-201ENST00000316763 HERC1Q15751 4861 aa7.62□□□□□ -1.19
VRK3-201ENST00000316763 A6NN06 94 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms