RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 WWC2-AS2Q96NR7 200 aa8.03□□□□□ -1.12
SKA3-202ENST00000314759 ANAPC11Q9NYG5 84 aa8.02□□□□□ -1.12
SKA3-202ENST00000314759 FRAS1Q86XX4 4008 aa8.02□□□□□ -1.13
SKA3-202ENST00000314759 MDFIQ99750 246 aa8.02□□□□□ -1.13
SKA3-202ENST00000314759 MRPL34Q9BQ48 92 aaKnown RBP8.01□□□□□ -1.13
SKA3-202ENST00000314759 DNAH8Q96JB1 4490 aa8.01□□□□□ -1.13
SKA3-202ENST00000314759 CDK2AP2O75956 126 aa8□□□□□ -1.13
SKA3-202ENST00000314759 PSORS1C2Q9UIG4 136 aa7.99□□□□□ -1.13
SKA3-202ENST00000314759 ZNF706Q9Y5V0 76 aaPredicted RBP7.99□□□□□ -1.13
SKA3-202ENST00000314759 PRR26Q8N8Z3 221 aa7.98□□□□□ -1.13
SKA3-202ENST00000314759 IGLV5-52A0A0A0MRZ9 124 aa7.97□□□□□ -1.13
SKA3-202ENST00000314759 C7orf65Q6ZTY9 151 aa7.97□□□□□ -1.13
SKA3-202ENST00000314759 A0A087WTM6 91 aa7.95□□□□□ -1.14
SKA3-202ENST00000314759 HECTD4Q9Y4D8 3996 aa7.95□□□□□ -1.14
SKA3-202ENST00000314759 ZNF861PO60384 105 aa7.94□□□□□ -1.14
SKA3-202ENST00000314759 Q5W150 140 aa7.93□□□□□ -1.14
SKA3-202ENST00000314759 VPS13DQ5THJ4 4388 aa7.93□□□□□ -1.14
SKA3-202ENST00000314759 NUPR2A6NF83 97 aa7.92□□□□□ -1.14
SKA3-202ENST00000314759 RTL8CO15255 209 aa7.92□□□□□ -1.14
SKA3-202ENST00000314759 SPINK6Q6UWN8 80 aa7.92□□□□□ -1.14
SKA3-202ENST00000314759 STARD9Q9P2P6 4700 aa7.91□□□□□ -1.14
SKA3-202ENST00000314759 KRTAP13-3Q3SY46 172 aa7.9□□□□□ -1.14
SKA3-202ENST00000314759 DNAH17Q9UFH2 4485 aa7.89□□□□□ -1.15
SKA3-202ENST00000314759 DNAH2Q9P225 4427 aa7.88□□□□□ -1.15
SKA3-202ENST00000314759 KMT2AQ03164 3969 aa7.87□□□□□ -1.15
SKA3-202ENST00000314759 PRAC1Q96KF2 57 aa7.86□□□□□ -1.15
SKA3-202ENST00000314759 ALMS1Q8TCU4 4167 aa7.85□□□□□ -1.15
SKA3-202ENST00000314759 CIRBP-AS1Q8TBR5 109 aa7.85□□□□□ -1.15
SKA3-202ENST00000314759 LINC00313P59037 77 aa7.85□□□□□ -1.15
SKA3-202ENST00000314759 ADM2Q7Z4H4 148 aa7.84□□□□□ -1.15
SKA3-202ENST00000314759 PRKDCP78527 4128 aaKnown RBP7.83□□□□□ -1.16
SKA3-202ENST00000314759 IGLV7-43P04211 117 aa7.82□□□□□ -1.16
SKA3-202ENST00000314759 FBN3Q75N90 2809 aa7.81□□□□□ -1.16
SKA3-202ENST00000314759 ACYP2P14621 99 aa7.8□□□□□ -1.16
SKA3-202ENST00000314759 TGP01266 2768 aa7.79□□□□□ -1.16
SKA3-202ENST00000314759 MEGF8Q7Z7M0 2845 aa7.78□□□□□ -1.16
SKA3-202ENST00000314759 C8orf87E5RJ46 101 aa7.78□□□□□ -1.16
SKA3-202ENST00000314759 RETNLBQ9BQ08 111 aa7.78□□□□□ -1.16
SKA3-202ENST00000314759 SSBP3-AS1Q7Z2R9 100 aa7.76□□□□□ -1.17
SKA3-202ENST00000314759 DMAC1Q96GE9 116 aa7.76□□□□□ -1.17
SKA3-202ENST00000314759 DNAH6Q9C0G6 4158 aa7.74□□□□□ -1.17
SKA3-202ENST00000314759 DNAH11Q96DT5 4516 aa7.74□□□□□ -1.17
SKA3-202ENST00000314759 A0A1B0GU69 56 aa7.73□□□□□ -1.17
SKA3-202ENST00000314759 DNHD1Q96M86 4753 aa7.73□□□□□ -1.17
SKA3-202ENST00000314759 FAM229AH3BQW9 127 aa7.72□□□□□ -1.17
SKA3-202ENST00000314759 PLA2G1BP04054 148 aaKnown RBP7.71□□□□□ -1.18
SKA3-202ENST00000314759 C1orf134Q5TEV5 83 aa7.7□□□□□ -1.18
SKA3-202ENST00000314759 IGKV2-30P06310 120 aa7.69□□□□□ -1.18
SKA3-202ENST00000314759 SPATA8Q6RVD6 105 aa7.69□□□□□ -1.18
SKA3-202ENST00000314759 KRTAP13-2Q52LG2 175 aa7.68□□□□□ -1.18
SKA3-202ENST00000314759 DNAH5Q8TE73 4624 aa7.67□□□□□ -1.18
SKA3-202ENST00000314759 KRTAP16-1A8MUX0 517 aa7.65□□□□□ -1.18
SKA3-202ENST00000314759 MIR22HGQ0VDD5 57 aa7.65□□□□□ -1.18
SKA3-202ENST00000314759 KRTAP10-2P60368 255 aa7.63□□□□□ -1.19
SKA3-202ENST00000314759 LINC01554Q52M75 96 aa7.63□□□□□ -1.19
SKA3-202ENST00000314759 LRP1BQ9NZR2 4599 aa7.63□□□□□ -1.19
SKA3-202ENST00000314759 UQCR11O14957 56 aa7.61□□□□□ -1.19
SKA3-202ENST00000314759 IGKV2D-30A0A075B6S6 120 aa7.59□□□□□ -1.19
SKA3-202ENST00000314759 LY6G6CO95867 125 aa7.58□□□□□ -1.2
SKA3-202ENST00000314759 KRTAP1-4P0C5Y4 121 aa7.55□□□□□ -1.2
SKA3-202ENST00000314759 CSAG1Q6PB30 78 aa7.55□□□□□ -1.2
SKA3-202ENST00000314759 C4orf48Q5BLP8 95 aa7.54□□□□□ -1.2
SKA3-202ENST00000314759 KRTAP10-1P60331 282 aa7.52□□□□□ -1.21
SKA3-202ENST00000314759 Q6ZSA8 131 aa7.52□□□□□ -1.21
SKA3-202ENST00000314759 VPS13BQ7Z7G8 4022 aa7.52□□□□□ -1.21
SKA3-202ENST00000314759 SPINK1P00995 79 aa7.5□□□□□ -1.21
SKA3-202ENST00000314759 PKD1P98161 4303 aa7.5□□□□□ -1.21
SKA3-202ENST00000314759 FAT2Q9NYQ8 4349 aa7.46□□□□□ -1.21
SKA3-202ENST00000314759 Q8N1X5 172 aa7.45□□□□□ -1.22
SKA3-202ENST00000314759 TYMSOSQ8TAI1 123 aa7.44□□□□□ -1.22
SKA3-202ENST00000314759 HYDINQ4G0P3 5121 aa7.42□□□□□ -1.22
SKA3-202ENST00000314759 H3BS24 57 aa7.4□□□□□ -1.22
SKA3-202ENST00000314759 H0YAA0 97 aa7.36□□□□□ -1.23
SKA3-202ENST00000314759 LINC00304Q8N9R0 145 aa7.32□□□□□ -1.24
SKA3-202ENST00000314759 A8MUU9 505 aa7.32□□□□□ -1.24
SKA3-202ENST00000314759 PKHD1P08F94 4074 aa7.3□□□□□ -1.24
SKA3-202ENST00000314759 RPS29P62273 56 aaKnown RBP7.29□□□□□ -1.24
SKA3-202ENST00000314759 FLG2Q5D862 2391 aaPredicted RBP7.28□□□□□ -1.24
SKA3-202ENST00000314759 KRTAP3-1Q9BYR8 98 aa7.27□□□□□ -1.25
SKA3-202ENST00000314759 C9orf92A6NGG3 77 aa7.26□□□□□ -1.25
SKA3-202ENST00000314759 KRTAP25-1Q3LHN0 102 aa7.25□□□□□ -1.25
SKA3-202ENST00000314759 SACSQ9NZJ4 4579 aa7.25□□□□□ -1.25
SKA3-202ENST00000314759 C20orf166-AS1Q96NR2 134 aa7.24□□□□□ -1.25
SKA3-202ENST00000314759 A0A1B0GU33 70 aa7.23□□□□□ -1.25
SKA3-202ENST00000314759 CRIPTQ9P021 101 aa7.21□□□□□ -1.25
SKA3-202ENST00000314759 KRTAP21-3Q3LHN1 58 aa7.2□□□□□ -1.26
SKA3-202ENST00000314759 H1FX-AS1Q4G0G2 97 aa7.19□□□□□ -1.26
SKA3-202ENST00000314759 SMR3BP02814 79 aaPredicted RBP7.18□□□□□ -1.26
SKA3-202ENST00000314759 PKHD1L1Q86WI1 4243 aa7.18□□□□□ -1.26
SKA3-202ENST00000314759 FAT1Q14517 4588 aa7.17□□□□□ -1.26
SKA3-202ENST00000314759 ROMO1P60602 79 aa7.17□□□□□ -1.26
SKA3-202ENST00000314759 DYNC1H1Q14204 4646 aaKnown RBP7.14□□□□□ -1.27
SKA3-202ENST00000314759 APOBP04114 4563 aaKnown RBP7.1□□□□□ -1.27
SKA3-202ENST00000314759 KRTAP10-4P60372 401 aaPredicted RBP7.08□□□□□ -1.28
SKA3-202ENST00000314759 COX6B2Q6YFQ2 88 aa7.07□□□□□ -1.28
SKA3-202ENST00000314759 P0C880 135 aa7.02□□□□□ -1.29
SKA3-202ENST00000314759 K7ERS5 55 aa7□□□□□ -1.29
SKA3-202ENST00000314759 A0A1B0GVY2 172 aa6.97□□□□□ -1.29
SKA3-202ENST00000314759 DMBT1Q9UGM3 2413 aaPredicted RBP6.96□□□□□ -1.3
SKA3-202ENST00000314759 KRTAP13-4Q3LI77 160 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms