RNA–Protein interactions for RNA: ENST00000312849.4

LSMEM1-201, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSMEM1, Length 1,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-201ENST00000312849 A0A087X002 238 aa5.66□□□□□ -1.5
LSMEM1-201ENST00000312849 NOTCH2NLQ7Z3S9 236 aa5.66□□□□□ -1.5
LSMEM1-201ENST00000312849 CSMD3Q7Z407 3707 aa5.66□□□□□ -1.5
LSMEM1-201ENST00000312849 SPINK6Q6UWN8 80 aa5.66□□□□□ -1.5
LSMEM1-201ENST00000312849 VPS13DQ5THJ4 4388 aa5.66□□□□□ -1.5
LSMEM1-201ENST00000312849 LY6G6CO95867 125 aa5.65□□□□□ -1.5
LSMEM1-201ENST00000312849 PRR15LQ9BU68 103 aa5.65□□□□□ -1.5
LSMEM1-201ENST00000312849 DNAH7Q8WXX0 4024 aa5.65□□□□□ -1.5
LSMEM1-201ENST00000312849 Q75L30 129 aa5.64□□□□□ -1.51
LSMEM1-201ENST00000312849 CHKB-CPT1BH3BT56 60 aa5.64□□□□□ -1.51
LSMEM1-201ENST00000312849 KRTAP13-3Q3SY46 172 aa5.64□□□□□ -1.51
LSMEM1-201ENST00000312849 LINC01558Q9Y6Z2 57 aa5.63□□□□□ -1.51
LSMEM1-201ENST00000312849 PLECQ15149 4684 aaKnown RBP5.62□□□□□ -1.51
LSMEM1-201ENST00000312849 HRES1P13985 223 aa5.62□□□□□ -1.51
LSMEM1-201ENST00000312849 LINC00313P59037 77 aa5.61□□□□□ -1.51
LSMEM1-201ENST00000312849 Q5W150 140 aa5.6□□□□□ -1.51
LSMEM1-201ENST00000312849 Q6ZSA8 131 aa5.6□□□□□ -1.51
LSMEM1-201ENST00000312849 FAM229AH3BQW9 127 aa5.6□□□□□ -1.51
LSMEM1-201ENST00000312849 KRTAP10-2P60368 255 aa5.59□□□□□ -1.51
LSMEM1-201ENST00000312849 ACYP2P14621 99 aa5.58□□□□□ -1.52
LSMEM1-201ENST00000312849 DNAH17Q9UFH2 4485 aa5.58□□□□□ -1.52
LSMEM1-201ENST00000312849 HECTD4Q9Y4D8 3996 aa5.57□□□□□ -1.52
LSMEM1-201ENST00000312849 KRTAP13-2Q52LG2 175 aa5.57□□□□□ -1.52
LSMEM1-201ENST00000312849 SPAG11AQ6PDA7 123 aa5.57□□□□□ -1.52
LSMEM1-201ENST00000312849 A6NED7 52 aa5.56□□□□□ -1.52
LSMEM1-201ENST00000312849 STARD9Q9P2P6 4700 aa5.56□□□□□ -1.52
LSMEM1-201ENST00000312849 PRKDCP78527 4128 aaKnown RBP5.56□□□□□ -1.52
LSMEM1-201ENST00000312849 KRTAP10-1P60331 282 aa5.55□□□□□ -1.52
LSMEM1-201ENST00000312849 ATP11AUNQ6ZP68 121 aa5.54□□□□□ -1.52
LSMEM1-201ENST00000312849 DMAC1Q96GE9 116 aa5.54□□□□□ -1.52
LSMEM1-201ENST00000312849 IGKV2-30P06310 120 aa5.54□□□□□ -1.52
LSMEM1-201ENST00000312849 PMAIP1Q13794 54 aa5.54□□□□□ -1.52
LSMEM1-201ENST00000312849 CDC42SE1Q9NRR8 79 aa5.54□□□□□ -1.52
LSMEM1-201ENST00000312849 FBN3Q75N90 2809 aa5.53□□□□□ -1.52
LSMEM1-201ENST00000312849 C4orf48Q5BLP8 95 aa5.52□□□□□ -1.53
LSMEM1-201ENST00000312849 DNAH6Q9C0G6 4158 aa5.52□□□□□ -1.53
LSMEM1-201ENST00000312849 KRTAP16-1A8MUX0 517 aa5.51□□□□□ -1.53
LSMEM1-201ENST00000312849 KRTAP1-4P0C5Y4 121 aa5.51□□□□□ -1.53
LSMEM1-201ENST00000312849 LCA10Q71F78 164 aa5.51□□□□□ -1.53
LSMEM1-201ENST00000312849 DNAH8Q96JB1 4490 aa5.51□□□□□ -1.53
LSMEM1-201ENST00000312849 MEGF8Q7Z7M0 2845 aa5.51□□□□□ -1.53
LSMEM1-201ENST00000312849 A8MU10 97 aa5.49□□□□□ -1.53
LSMEM1-201ENST00000312849 SPINK1P00995 79 aa5.49□□□□□ -1.53
LSMEM1-201ENST00000312849 PRR26Q8N8Z3 221 aa5.49□□□□□ -1.53
LSMEM1-201ENST00000312849 TGP01266 2768 aa5.48□□□□□ -1.53
LSMEM1-201ENST00000312849 DNAH2Q9P225 4427 aa5.47□□□□□ -1.53
LSMEM1-201ENST00000312849 TYMSOSQ8TAI1 123 aa5.47□□□□□ -1.53
LSMEM1-201ENST00000312849 PLA2G1BP04054 148 aaKnown RBP5.47□□□□□ -1.53
LSMEM1-201ENST00000312849 SPTSSBQ8NFR3 76 aa5.47□□□□□ -1.53
LSMEM1-201ENST00000312849 KMT2AQ03164 3969 aa5.46□□□□□ -1.54
LSMEM1-201ENST00000312849 RPS29P62273 56 aaKnown RBP5.46□□□□□ -1.54
LSMEM1-201ENST00000312849 RETNLBQ9BQ08 111 aa5.45□□□□□ -1.54
LSMEM1-201ENST00000312849 SPINK7P58062 85 aa5.45□□□□□ -1.54
LSMEM1-201ENST00000312849 A6NN06 94 aa5.42□□□□□ -1.54
LSMEM1-201ENST00000312849 KTN1-AS1Q86SY8 53 aa5.42□□□□□ -1.54
LSMEM1-201ENST00000312849 ALMS1Q8TCU4 4167 aa5.41□□□□□ -1.54
LSMEM1-201ENST00000312849 FRAS1Q86XX4 4008 aa5.41□□□□□ -1.54
LSMEM1-201ENST00000312849 IGKV2D-30A0A075B6S6 120 aa5.41□□□□□ -1.54
LSMEM1-201ENST00000312849 A0A1B0GU69 56 aa5.41□□□□□ -1.54
LSMEM1-201ENST00000312849 KRTAP4-8Q9BYQ9 185 aa5.41□□□□□ -1.54
LSMEM1-201ENST00000312849 LINC00304Q8N9R0 145 aa5.4□□□□□ -1.55
LSMEM1-201ENST00000312849 C7orf65Q6ZTY9 151 aa5.39□□□□□ -1.55
LSMEM1-201ENST00000312849 KRTAP21-3Q3LHN1 58 aa5.38□□□□□ -1.55
LSMEM1-201ENST00000312849 SEC61GP60059 68 aa5.37□□□□□ -1.55
LSMEM1-201ENST00000312849 LCE2AQ5TA79 106 aaPredicted RBP5.37□□□□□ -1.55
LSMEM1-201ENST00000312849 DNAH11Q96DT5 4516 aa5.35□□□□□ -1.55
LSMEM1-201ENST00000312849 SPATA8Q6RVD6 105 aa5.34□□□□□ -1.55
LSMEM1-201ENST00000312849 DNAH5Q8TE73 4624 aa5.34□□□□□ -1.55
LSMEM1-201ENST00000312849 UQCR11O14957 56 aa5.32□□□□□ -1.56
LSMEM1-201ENST00000312849 PKD1P98161 4303 aa5.32□□□□□ -1.56
LSMEM1-201ENST00000312849 A8MUU9 505 aa5.3□□□□□ -1.56
LSMEM1-201ENST00000312849 C20orf166-AS1Q96NR2 134 aa5.3□□□□□ -1.56
LSMEM1-201ENST00000312849 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.3□□□□□ -1.56
LSMEM1-201ENST00000312849 J3QL48 77 aa5.3□□□□□ -1.56
LSMEM1-201ENST00000312849 MIR22HGQ0VDD5 57 aa5.3□□□□□ -1.56
LSMEM1-201ENST00000312849 LCE2CQ5TA81 110 aa5.3□□□□□ -1.56
LSMEM1-201ENST00000312849 KRTAP9-2Q9BYQ4 174 aa5.28□□□□□ -1.56
LSMEM1-201ENST00000312849 KRTAP9-6A0A140TA67 174 aa5.26□□□□□ -1.57
LSMEM1-201ENST00000312849 A0A1B0GVY2 172 aa5.26□□□□□ -1.57
LSMEM1-201ENST00000312849 SMR3BP02814 79 aaPredicted RBP5.26□□□□□ -1.57
LSMEM1-201ENST00000312849 Q8N1X5 172 aa5.26□□□□□ -1.57
LSMEM1-201ENST00000312849 LRP1BQ9NZR2 4599 aa5.26□□□□□ -1.57
LSMEM1-201ENST00000312849 RBM12B-AS1Q9P1G2 102 aa5.25□□□□□ -1.57
LSMEM1-201ENST00000312849 KRTAP10-4P60372 401 aaPredicted RBP5.24□□□□□ -1.57
LSMEM1-201ENST00000312849 FAT2Q9NYQ8 4349 aa5.24□□□□□ -1.57
LSMEM1-201ENST00000312849 VPS13BQ7Z7G8 4022 aa5.23□□□□□ -1.57
LSMEM1-201ENST00000312849 C9orf92A6NGG3 77 aa5.22□□□□□ -1.57
LSMEM1-201ENST00000312849 SACSQ9NZJ4 4579 aa5.19□□□□□ -1.58
LSMEM1-201ENST00000312849 DNHD1Q96M86 4753 aa5.18□□□□□ -1.58
LSMEM1-201ENST00000312849 HYDINQ4G0P3 5121 aa5.17□□□□□ -1.58
LSMEM1-201ENST00000312849 KRTAP3-1Q9BYR8 98 aa5.15□□□□□ -1.58
LSMEM1-201ENST00000312849 LORP23490 312 aaPredicted RBP5.15□□□□□ -1.59
LSMEM1-201ENST00000312849 XP32Q5T750 250 aa5.14□□□□□ -1.59
LSMEM1-201ENST00000312849 COX6B2Q6YFQ2 88 aa5.14□□□□□ -1.59
LSMEM1-201ENST00000312849 KRTAP4-8A0A0G2JLE6 195 aa5.12□□□□□ -1.59
LSMEM1-201ENST00000312849 A0A1B0GU33 70 aa5.11□□□□□ -1.59
LSMEM1-201ENST00000312849 H1FX-AS1Q4G0G2 97 aa5.1□□□□□ -1.59
LSMEM1-201ENST00000312849 KRTAP10-8P60410 259 aa5.09□□□□□ -1.59
LSMEM1-201ENST00000312849 PRAC1Q96KF2 57 aa5.09□□□□□ -1.59
LSMEM1-201ENST00000312849 LCE3BQ5TA77 95 aa5.09□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms