RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 DSCR10P59022 87 aa6.9□□□□□ -1.3
CHMP2A-201ENST00000312547 XP32Q5T750 250 aa6.9□□□□□ -1.3
CHMP2A-201ENST00000312547 A0A1B0GVX0 72 aa6.89□□□□□ -1.31
CHMP2A-201ENST00000312547 IGKV3D-7A0A0C4DH55 119 aa6.88□□□□□ -1.31
CHMP2A-201ENST00000312547 BPY2O14599 106 aa6.88□□□□□ -1.31
CHMP2A-201ENST00000312547 IGHV6-1A0A0B4J1U7 121 aa6.87□□□□□ -1.31
CHMP2A-201ENST00000312547 NDUFB1O75438 58 aa6.87□□□□□ -1.31
CHMP2A-201ENST00000312547 NOTCH2NLQ7Z3S9 236 aa6.87□□□□□ -1.31
CHMP2A-201ENST00000312547 PRR15Q8IV56 129 aa6.86□□□□□ -1.31
CHMP2A-201ENST00000312547 MUC2Q02817 5179 aa6.86□□□□□ -1.31
CHMP2A-201ENST00000312547 C8orf87E5RJ46 101 aa6.85□□□□□ -1.31
CHMP2A-201ENST00000312547 LINC00313P59037 77 aa6.85□□□□□ -1.31
CHMP2A-201ENST00000312547 MUC17Q685J3 4493 aa6.85□□□□□ -1.31
CHMP2A-201ENST00000312547 KRTAP16-1A8MUX0 517 aa6.84□□□□□ -1.31
CHMP2A-201ENST00000312547 J3QR89 54 aa6.84□□□□□ -1.31
CHMP2A-201ENST00000312547 K7EQZ3 153 aa6.84□□□□□ -1.31
CHMP2A-201ENST00000312547 CXCL6P80162 114 aa6.82□□□□□ -1.32
CHMP2A-201ENST00000312547 C8orf17Q9NRJ1 99 aa6.82□□□□□ -1.32
CHMP2A-201ENST00000312547 RPL37P61927 97 aaKnown RBP6.81□□□□□ -1.32
CHMP2A-201ENST00000312547 Q8N9L7 120 aa6.81□□□□□ -1.32
CHMP2A-201ENST00000312547 C20orf166-AS1Q96NR2 134 aa6.81□□□□□ -1.32
CHMP2A-201ENST00000312547 A8MUU9 505 aa6.8□□□□□ -1.32
CHMP2A-201ENST00000312547 Q75L30 129 aa6.8□□□□□ -1.32
CHMP2A-201ENST00000312547 MMP24-AS1A0A0U1RRL7 71 aa6.79□□□□□ -1.32
CHMP2A-201ENST00000312547 LCE2DQ5TA82 110 aaPredicted RBP6.79□□□□□ -1.32
CHMP2A-201ENST00000312547 ATP5EP2Q5VTU8 51 aa6.78□□□□□ -1.32
CHMP2A-201ENST00000312547 LINC00643Q86TS7 51 aa6.78□□□□□ -1.32
CHMP2A-201ENST00000312547 SEC61BP60468 96 aaKnown RBP6.77□□□□□ -1.33
CHMP2A-201ENST00000312547 K7ERU9 68 aa6.76□□□□□ -1.33
CHMP2A-201ENST00000312547 FAT4Q6V0I7 4981 aa6.75□□□□□ -1.33
CHMP2A-201ENST00000312547 Q8N9P0 234 aaPredicted RBP6.75□□□□□ -1.33
CHMP2A-201ENST00000312547 TMEM254Q8TBM7 123 aa6.74□□□□□ -1.33
CHMP2A-201ENST00000312547 hDV103S1A0JD37 113 aa6.73□□□□□ -1.33
CHMP2A-201ENST00000312547 PCOTHQ58A44 107 aa6.73□□□□□ -1.33
CHMP2A-201ENST00000312547 MRPL34Q9BQ48 92 aaKnown RBP6.72□□□□□ -1.33
CHMP2A-201ENST00000312547 HCG22E2RYF7 251 aa6.7□□□□□ -1.34
CHMP2A-201ENST00000312547 CASC2Q6XLA1 102 aa6.7□□□□□ -1.34
CHMP2A-201ENST00000312547 WFDC13Q8IUB5 93 aa6.7□□□□□ -1.34
CHMP2A-201ENST00000312547 ATP11AUNQ6ZP68 121 aa6.69□□□□□ -1.34
CHMP2A-201ENST00000312547 KRTAP9-2Q9BYQ4 174 aa6.69□□□□□ -1.34
CHMP2A-201ENST00000312547 KRTAP4-1Q9BYQ7 146 aa6.69□□□□□ -1.34
CHMP2A-201ENST00000312547 HIST1H4AP62805 103 aaKnown RBP6.65□□□□□ -1.34
CHMP2A-201ENST00000312547 ZCCHC13Q8WW36 166 aaKnown RBP6.64□□□□□ -1.35
CHMP2A-201ENST00000312547 A0A087WVE0 104 aa6.62□□□□□ -1.35
CHMP2A-201ENST00000312547 NDUFS5O43920 106 aa6.61□□□□□ -1.35
CHMP2A-201ENST00000312547 MT-ATP8P03928 68 aa6.61□□□□□ -1.35
CHMP2A-201ENST00000312547 LCE2AQ5TA79 106 aaPredicted RBP6.6□□□□□ -1.35
CHMP2A-201ENST00000312547 IMUPQ9GZP8 106 aa6.59□□□□□ -1.35
CHMP2A-201ENST00000312547 Q5W150 140 aa6.58□□□□□ -1.36
CHMP2A-201ENST00000312547 TP53AIP1Q9HCN2 124 aa6.56□□□□□ -1.36
CHMP2A-201ENST00000312547 KRTAP9-6A0A140TA67 174 aa6.55□□□□□ -1.36
CHMP2A-201ENST00000312547 A0A0U1RQV1 116 aa6.53□□□□□ -1.36
CHMP2A-201ENST00000312547 SPINK7P58062 85 aa6.51□□□□□ -1.37
CHMP2A-201ENST00000312547 KRTAP19-2Q3LHN2 52 aa6.51□□□□□ -1.37
CHMP2A-201ENST00000312547 HRES1P13985 223 aa6.49□□□□□ -1.37
CHMP2A-201ENST00000312547 OCR1Q9BZK8 76 aa6.49□□□□□ -1.37
CHMP2A-201ENST00000312547 UQCRQO14949 82 aa6.48□□□□□ -1.37
CHMP2A-201ENST00000312547 MPLKIPQ8TAP9 179 aa6.47□□□□□ -1.37
CHMP2A-201ENST00000312547 TRAV22A0A0B4J277 110 aa6.45□□□□□ -1.38
CHMP2A-201ENST00000312547 FAM236AA0A1B0GUQ0 79 aa6.45□□□□□ -1.38
CHMP2A-201ENST00000312547 FAM236BA0A1B0GV22 79 aa6.45□□□□□ -1.38
CHMP2A-201ENST00000312547 LCE2CQ5TA81 110 aa6.45□□□□□ -1.38
CHMP2A-201ENST00000312547 IGKV2D-30A0A075B6S6 120 aa6.44□□□□□ -1.38
CHMP2A-201ENST00000312547 IGKV2-30P06310 120 aa6.44□□□□□ -1.38
CHMP2A-201ENST00000312547 C7orf65Q6ZTY9 151 aa6.44□□□□□ -1.38
CHMP2A-201ENST00000312547 SCGB1A1P11684 91 aa6.43□□□□□ -1.38
CHMP2A-201ENST00000312547 H0Y9P7 68 aa6.4□□□□□ -1.38
CHMP2A-201ENST00000312547 ATOX1O00244 68 aa6.39□□□□□ -1.39
CHMP2A-201ENST00000312547 LOC101927531A0A1B0GV80 90 aa6.38□□□□□ -1.39
CHMP2A-201ENST00000312547 C5orf47Q569G3 176 aa6.38□□□□□ -1.39
CHMP2A-201ENST00000312547 CYP4F30PQ9H0H9 118 aa6.38□□□□□ -1.39
CHMP2A-201ENST00000312547 SMIM20Q8N5G0 67 aa6.37□□□□□ -1.39
CHMP2A-201ENST00000312547 RBM12B-AS1Q9P1G2 102 aa6.37□□□□□ -1.39
CHMP2A-201ENST00000312547 TRAV7A0A075B6U4 112 aa6.36□□□□□ -1.39
CHMP2A-201ENST00000312547 COX6B2Q6YFQ2 88 aa6.36□□□□□ -1.39
CHMP2A-201ENST00000312547 MP68P56378 58 aa6.35□□□□□ -1.39
CHMP2A-201ENST00000312547 FSIP2Q5CZC0 6907 aa6.34□□□□□ -1.39
CHMP2A-201ENST00000312547 C1orf64Q8NEQ6 169 aa6.34□□□□□ -1.39
CHMP2A-201ENST00000312547 LINC00208Q96KT6 92 aa6.34□□□□□ -1.39
CHMP2A-201ENST00000312547 H3BPC8 53 aa6.33□□□□□ -1.4
CHMP2A-201ENST00000312547 FLGP20930 4061 aaPredicted RBP6.32□□□□□ -1.4
CHMP2A-201ENST00000312547 MT1HP80294 61 aa6.32□□□□□ -1.4
CHMP2A-201ENST00000312547 FAM236DA0A1B0GTK5 79 aa6.31□□□□□ -1.4
CHMP2A-201ENST00000312547 FAM236CP0DP71 79 aa6.31□□□□□ -1.4
CHMP2A-201ENST00000312547 C4orf26Q17RF5 130 aa6.31□□□□□ -1.4
CHMP2A-201ENST00000312547 KRTAP3-3Q9BYR6 98 aa6.29□□□□□ -1.4
CHMP2A-201ENST00000312547 KRTAP3-2Q9BYR7 98 aa6.29□□□□□ -1.4
CHMP2A-201ENST00000312547 SERP2Q8N6R1 65 aa6.28□□□□□ -1.4
CHMP2A-201ENST00000312547 KLKP1Q107X0 134 aa6.26□□□□□ -1.41
CHMP2A-201ENST00000312547 KRTAP3-1Q9BYR8 98 aa6.26□□□□□ -1.41
CHMP2A-201ENST00000312547 CRCT1Q9UGL9 99 aa6.25□□□□□ -1.41
CHMP2A-201ENST00000312547 H1FX-AS1Q4G0G2 97 aa6.24□□□□□ -1.41
CHMP2A-201ENST00000312547 COX7CP15954 63 aa6.19□□□□□ -1.42
CHMP2A-201ENST00000312547 C20orf197Q8N268 126 aa6.18□□□□□ -1.42
CHMP2A-201ENST00000312547 SNURFQ9Y675 71 aa6.18□□□□□ -1.42
CHMP2A-201ENST00000312547 M0R2T5 61 aa6.17□□□□□ -1.42
CHMP2A-201ENST00000312547 A8MUN3 132 aa6.14□□□□□ -1.43
CHMP2A-201ENST00000312547 KRTAP10-6P60371 365 aaPredicted RBP6.14□□□□□ -1.43
CHMP2A-201ENST00000312547 ANAPC13Q9BS18 74 aa6.14□□□□□ -1.43
CHMP2A-201ENST00000312547 LORP23490 312 aaPredicted RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms