RNA–Protein interactions for RNA: ENST00000312352.11

PFKM-201, Transcript of phosphofructokinase, muscle, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFKM, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-201ENST00000312352 ATRQ13535 2644 aa7.18□□□□□ -1.26
PFKM-201ENST00000312352 PANO1I0J062 215 aa7.18□□□□□ -1.26
PFKM-201ENST00000312352 SEC61BP60468 96 aaKnown RBP7.17□□□□□ -1.26
PFKM-201ENST00000312352 ACANP16112 2415 aa7.17□□□□□ -1.26
PFKM-201ENST00000312352 IGSF10Q6WRI0 2623 aa7.16□□□□□ -1.26
PFKM-201ENST00000312352 CIRBP-AS1Q8TBR5 109 aa7.16□□□□□ -1.26
PFKM-201ENST00000312352 NBDYA0A0U1RRE5 68 aa7.15□□□□□ -1.27
PFKM-201ENST00000312352 LY6G6CO95867 125 aa7.14□□□□□ -1.27
PFKM-201ENST00000312352 TYMSOSQ8TAI1 123 aa7.1□□□□□ -1.27
PFKM-201ENST00000312352 NOTCH2Q04721 2471 aa7.09□□□□□ -1.27
PFKM-201ENST00000312352 IGKV2D-30A0A075B6S6 120 aa7.09□□□□□ -1.28
PFKM-201ENST00000312352 A0A1B0GU33 70 aa7.09□□□□□ -1.28
PFKM-201ENST00000312352 IGKV2-30P06310 120 aa7.09□□□□□ -1.28
PFKM-201ENST00000312352 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.08□□□□□ -1.28
PFKM-201ENST00000312352 USP24Q9UPU5 2620 aa7.05□□□□□ -1.28
PFKM-201ENST00000312352 Q8N1X5 172 aa7.04□□□□□ -1.28
PFKM-201ENST00000312352 NOTCH1P46531 2555 aa7.03□□□□□ -1.28
PFKM-201ENST00000312352 TEP1Q99973 2627 aaKnown RBP7.02□□□□□ -1.28
PFKM-201ENST00000312352 J3QL48 77 aa7.02□□□□□ -1.29
PFKM-201ENST00000312352 SPRR1BP22528 89 aa7.01□□□□□ -1.29
PFKM-201ENST00000312352 FASNP49327 2511 aaKnown RBP7.01□□□□□ -1.29
PFKM-201ENST00000312352 SPART-AS1P0CW21 52 aa7□□□□□ -1.29
PFKM-201ENST00000312352 ITPR3Q14573 2671 aa6.99□□□□□ -1.29
PFKM-201ENST00000312352 KMT2BQ9UMN6 2715 aaPredicted RBP6.99□□□□□ -1.29
PFKM-201ENST00000312352 C14orf177Q52M58 125 aa6.99□□□□□ -1.29
PFKM-201ENST00000312352 ITPR2Q14571 2701 aa6.98□□□□□ -1.29
PFKM-201ENST00000312352 ANAPC11Q9NYG5 84 aa6.98□□□□□ -1.29
PFKM-201ENST00000312352 H1FX-AS1Q4G0G2 97 aa6.97□□□□□ -1.29
PFKM-201ENST00000312352 TGP01266 2768 aa6.96□□□□□ -1.3
PFKM-201ENST00000312352 ZNF469Q96JG9 3925 aaPredicted RBP6.94□□□□□ -1.3
PFKM-201ENST00000312352 FAM229AH3BQW9 127 aa6.93□□□□□ -1.3
PFKM-201ENST00000312352 COL6A5A8TX70 2615 aa6.91□□□□□ -1.3
PFKM-201ENST00000312352 LYSTQ99698 3801 aa6.89□□□□□ -1.31
PFKM-201ENST00000312352 FLNAP21333 2647 aaKnown RBP6.89□□□□□ -1.31
PFKM-201ENST00000312352 KRTAP10-9P60411 292 aa6.89□□□□□ -1.31
PFKM-201ENST00000312352 A0A0D9SG42 100 aa6.88□□□□□ -1.31
PFKM-201ENST00000312352 ANK3Q12955 4377 aaKnown RBP6.88□□□□□ -1.31
PFKM-201ENST00000312352 TENM3Q9P273 2699 aa6.88□□□□□ -1.31
PFKM-201ENST00000312352 LINC01556Q5JQF7 62 aa6.87□□□□□ -1.31
PFKM-201ENST00000312352 TENM4Q6N022 2769 aa6.86□□□□□ -1.31
PFKM-201ENST00000312352 WWC2-AS2Q96NR7 200 aa6.86□□□□□ -1.31
PFKM-201ENST00000312352 DNAH10Q8IVF4 4471 aa6.85□□□□□ -1.31
PFKM-201ENST00000312352 STAB2Q8WWQ8 2551 aa6.82□□□□□ -1.32
PFKM-201ENST00000312352 COX6B2Q6YFQ2 88 aa6.82□□□□□ -1.32
PFKM-201ENST00000312352 TENM1Q9UKZ4 2725 aa6.79□□□□□ -1.32
PFKM-201ENST00000312352 NSD1Q96L73 2696 aaPredicted RBP6.78□□□□□ -1.32
PFKM-201ENST00000312352 RPL37P61927 97 aaKnown RBP6.77□□□□□ -1.33
PFKM-201ENST00000312352 FRAS1Q86XX4 4008 aa6.76□□□□□ -1.33
PFKM-201ENST00000312352 APLNQ9ULZ1 77 aa6.76□□□□□ -1.33
PFKM-201ENST00000312352 FLNBO75369 2602 aaKnown RBP6.75□□□□□ -1.33
PFKM-201ENST00000312352 KRTAP24-1Q3LI83 254 aa6.73□□□□□ -1.33
PFKM-201ENST00000312352 KRTAP13-1Q8IUC0 172 aa6.7□□□□□ -1.34
PFKM-201ENST00000312352 KRTAP1-3Q8IUG1 177 aa6.66□□□□□ -1.34
PFKM-201ENST00000312352 KRTAP13-4Q3LI77 160 aa6.65□□□□□ -1.34
PFKM-201ENST00000312352 H3BNG1 76 aa6.65□□□□□ -1.35
PFKM-201ENST00000312352 SMR3AQ99954 134 aa6.64□□□□□ -1.35
PFKM-201ENST00000312352 DNAH1Q9P2D7 4330 aa6.63□□□□□ -1.35
PFKM-201ENST00000312352 KRTAP10-3P60369 221 aa6.6□□□□□ -1.35
PFKM-201ENST00000312352 MAST4O15021 2626 aa6.59□□□□□ -1.35
PFKM-201ENST00000312352 DNAH17Q9UFH2 4485 aa6.58□□□□□ -1.36
PFKM-201ENST00000312352 ANK2Q01484 3957 aa6.58□□□□□ -1.36
PFKM-201ENST00000312352 VPS13DQ5THJ4 4388 aa6.58□□□□□ -1.36
PFKM-201ENST00000312352 PLAC4Q8WY50 150 aa6.58□□□□□ -1.36
PFKM-201ENST00000312352 J3QKU1 62 aa6.57□□□□□ -1.36
PFKM-201ENST00000312352 STAB1Q9NY15 2570 aa6.56□□□□□ -1.36
PFKM-201ENST00000312352 DNAH8Q96JB1 4490 aa6.55□□□□□ -1.36
PFKM-201ENST00000312352 KRTAP3-1Q9BYR8 98 aa6.55□□□□□ -1.36
PFKM-201ENST00000312352 S4R3F8 94 aa6.53□□□□□ -1.36
PFKM-201ENST00000312352 MGAM2Q2M2H8 2515 aa6.53□□□□□ -1.36
PFKM-201ENST00000312352 KRTAP1-5Q9BYS1 174 aa6.53□□□□□ -1.36
PFKM-201ENST00000312352 FBN3Q75N90 2809 aa6.53□□□□□ -1.36
PFKM-201ENST00000312352 KRTAP1-1Q07627 177 aa6.52□□□□□ -1.37
PFKM-201ENST00000312352 KRTAP12-2P59991 146 aa6.51□□□□□ -1.37
PFKM-201ENST00000312352 CAMK2N1Q7Z7J9 78 aa6.48□□□□□ -1.37
PFKM-201ENST00000312352 DNAH9Q9NYC9 4486 aa6.48□□□□□ -1.37
PFKM-201ENST00000312352 KRTAP3-2Q9BYR7 98 aa6.47□□□□□ -1.37
PFKM-201ENST00000312352 SPACA4Q8TDM5 124 aa6.46□□□□□ -1.38
PFKM-201ENST00000312352 KMT2AQ03164 3969 aa6.46□□□□□ -1.38
PFKM-201ENST00000312352 XP32Q5T750 250 aa6.44□□□□□ -1.38
PFKM-201ENST00000312352 KRTAP10-6P60371 365 aaPredicted RBP6.43□□□□□ -1.38
PFKM-201ENST00000312352 CMYA5Q8N3K9 4069 aa6.4□□□□□ -1.38
PFKM-201ENST00000312352 KRTAP10-8P60410 259 aa6.34□□□□□ -1.39
PFKM-201ENST00000312352 HUWE1Q7Z6Z7 4374 aaKnown RBP6.31□□□□□ -1.4
PFKM-201ENST00000312352 KRTAP12-1P59990 96 aa6.3□□□□□ -1.4
PFKM-201ENST00000312352 UBE2DNLQ8IWF7 75 aa6.29□□□□□ -1.4
PFKM-201ENST00000312352 DNAH7Q8WXX0 4024 aa6.27□□□□□ -1.41
PFKM-201ENST00000312352 PRO2289Q9P1D8 64 aa6.26□□□□□ -1.41
PFKM-201ENST00000312352 R4GN34 69 aa6.26□□□□□ -1.41
PFKM-201ENST00000312352 KRTAP10-11P60412 298 aa6.24□□□□□ -1.41
PFKM-201ENST00000312352 KRTAP13-2Q52LG2 175 aa6.24□□□□□ -1.41
PFKM-201ENST00000312352 Q6ZRN7 208 aaPredicted RBP6.24□□□□□ -1.41
PFKM-201ENST00000312352 HECTD4Q9Y4D8 3996 aa6.23□□□□□ -1.41
PFKM-201ENST00000312352 C9orf92A6NGG3 77 aa6.22□□□□□ -1.41
PFKM-201ENST00000312352 KRTAP3-3Q9BYR6 98 aa6.15□□□□□ -1.42
PFKM-201ENST00000312352 DNAH3Q8TD57 4116 aa6.15□□□□□ -1.43
PFKM-201ENST00000312352 DNAH11Q96DT5 4516 aa6.13□□□□□ -1.43
PFKM-201ENST00000312352 KRTAP21-3Q3LHN1 58 aa6.07□□□□□ -1.44
PFKM-201ENST00000312352 DNAH2Q9P225 4427 aa6.02□□□□□ -1.45
PFKM-201ENST00000312352 DYNC2H1Q8NCM8 4307 aaKnown RBP5.94□□□□□ -1.46
PFKM-201ENST00000312352 DNAH6Q9C0G6 4158 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms