RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 C1orf134Q5TEV5 83 aa15.02□□□□□ -0.01
HOXB3-201ENST00000311626 LY6G6CO95867 125 aa15.01□□□□□ -0.01
HOXB3-201ENST00000311626 CIRBP-AS1Q8TBR5 109 aa15□□□□□ -0.01
HOXB3-201ENST00000311626 CD164Q04900 197 aa15□□□□□ -0.01
HOXB3-201ENST00000311626 DNHD1Q96M86 4753 aa14.99□□□□□ -0.01
HOXB3-201ENST00000311626 IGLV7-43P04211 117 aa14.96□□□□□ -0.01
HOXB3-201ENST00000311626 ALMS1Q8TCU4 4167 aa14.95□□□□□ -0.02
HOXB3-201ENST00000311626 MRPL34Q9BQ48 92 aaKnown RBP14.94□□□□□ -0.02
HOXB3-201ENST00000311626 TP53AIP1Q9HCN2 124 aa14.94□□□□□ -0.02
HOXB3-201ENST00000311626 DNAH11Q96DT5 4516 aa14.92□□□□□ -0.02
HOXB3-201ENST00000311626 COA5Q86WW8 74 aa14.92□□□□□ -0.02
HOXB3-201ENST00000311626 IGLV7-46A0A075B6I9 117 aa14.92□□□□□ -0.02
HOXB3-201ENST00000311626 KRTAP10-2P60368 255 aa14.91□□□□□ -0.02
HOXB3-201ENST00000311626 C1orf195Q5TG92 126 aa14.9□□□□□ -0.02
HOXB3-201ENST00000311626 Q8N9P0 234 aaPredicted RBP14.89□□□□□ -0.03
HOXB3-201ENST00000311626 A8MU10 97 aa14.88□□□□□ -0.03
HOXB3-201ENST00000311626 DNAH5Q8TE73 4624 aa14.88□□□□□ -0.03
HOXB3-201ENST00000311626 Q5VV11 94 aa14.85□□□□□ -0.03
HOXB3-201ENST00000311626 Q5W150 140 aa14.84□□□□□ -0.03
HOXB3-201ENST00000311626 PRR15LQ9BU68 103 aa14.82□□□□□ -0.04
HOXB3-201ENST00000311626 CHKB-CPT1BH3BT56 60 aa14.76□□□□□ -0.05
HOXB3-201ENST00000311626 RETNLBQ9BQ08 111 aa14.75□□□□□ -0.05
HOXB3-201ENST00000311626 LRP1BQ9NZR2 4599 aa14.74□□□□□ -0.05
HOXB3-201ENST00000311626 SPAG11AQ6PDA7 123 aa14.72□□□□□ -0.05
HOXB3-201ENST00000311626 HRES1P13985 223 aa14.71□□□□□ -0.06
HOXB3-201ENST00000311626 LIMD2Q9BT23 127 aa14.71□□□□□ -0.06
HOXB3-201ENST00000311626 HYDINQ4G0P3 5121 aa14.7□□□□□ -0.06
HOXB3-201ENST00000311626 KRTAP10-1P60331 282 aa14.68□□□□□ -0.06
HOXB3-201ENST00000311626 KRTAP13-2Q52LG2 175 aa14.68□□□□□ -0.06
HOXB3-201ENST00000311626 SSBP3-AS1Q7Z2R9 100 aa14.66□□□□□ -0.06
HOXB3-201ENST00000311626 KRTAP13-3Q3SY46 172 aa14.64□□□□□ -0.07
HOXB3-201ENST00000311626 PKD1P98161 4303 aa14.63□□□□□ -0.07
HOXB3-201ENST00000311626 LOC101927531A0A1B0GV80 90 aa14.6□□□□□ -0.07
HOXB3-201ENST00000311626 LINC00313P59037 77 aa14.58□□□□□ -0.08
HOXB3-201ENST00000311626 PRR26Q8N8Z3 221 aa14.57□□□□□ -0.08
HOXB3-201ENST00000311626 FAT2Q9NYQ8 4349 aa14.55□□□□□ -0.08
HOXB3-201ENST00000311626 A6NED7 52 aa14.55□□□□□ -0.08
HOXB3-201ENST00000311626 VPS13BQ7Z7G8 4022 aa14.53□□□□□ -0.08
HOXB3-201ENST00000311626 LCA10Q71F78 164 aa14.52□□□□□ -0.09
HOXB3-201ENST00000311626 Q75L30 129 aa14.52□□□□□ -0.09
HOXB3-201ENST00000311626 C8orf87E5RJ46 101 aa14.51□□□□□ -0.09
HOXB3-201ENST00000311626 Q6ZSA8 131 aa14.49□□□□□ -0.09
HOXB3-201ENST00000311626 LINC01558Q9Y6Z2 57 aa14.48□□□□□ -0.09
HOXB3-201ENST00000311626 H3BS24 57 aa14.48□□□□□ -0.09
HOXB3-201ENST00000311626 SPTSSBQ8NFR3 76 aa14.48□□□□□ -0.09
HOXB3-201ENST00000311626 KRTAP1-4P0C5Y4 121 aa14.46□□□□□ -0.09
HOXB3-201ENST00000311626 PMAIP1Q13794 54 aa14.43□□□□□ -0.1
HOXB3-201ENST00000311626 SPINK7P58062 85 aa14.4□□□□□ -0.1
HOXB3-201ENST00000311626 FAM229AH3BQW9 127 aa14.38□□□□□ -0.11
HOXB3-201ENST00000311626 KRTAP16-1A8MUX0 517 aa14.37□□□□□ -0.11
HOXB3-201ENST00000311626 PLA2G1BP04054 148 aaKnown RBP14.37□□□□□ -0.11
HOXB3-201ENST00000311626 ACYP2P14621 99 aa14.36□□□□□ -0.11
HOXB3-201ENST00000311626 IGKV2-30P06310 120 aa14.32□□□□□ -0.12
HOXB3-201ENST00000311626 PKHD1P08F94 4074 aa14.32□□□□□ -0.12
HOXB3-201ENST00000311626 IGKV2D-30A0A075B6S6 120 aa14.31□□□□□ -0.12
HOXB3-201ENST00000311626 TYMSOSQ8TAI1 123 aa14.3□□□□□ -0.12
HOXB3-201ENST00000311626 DMAC1Q96GE9 116 aa14.28□□□□□ -0.12
HOXB3-201ENST00000311626 CDC42SE1Q9NRR8 79 aa14.26□□□□□ -0.13
HOXB3-201ENST00000311626 ATP11AUNQ6ZP68 121 aa14.21□□□□□ -0.14
HOXB3-201ENST00000311626 SMR3BP02814 79 aaPredicted RBP14.19□□□□□ -0.14
HOXB3-201ENST00000311626 SPINK1P00995 79 aa14.11□□□□□ -0.15
HOXB3-201ENST00000311626 SACSQ9NZJ4 4579 aa14.09□□□□□ -0.15
HOXB3-201ENST00000311626 C7orf65Q6ZTY9 151 aa14.09□□□□□ -0.15
HOXB3-201ENST00000311626 A6NN06 94 aa14.08□□□□□ -0.16
HOXB3-201ENST00000311626 LINC00304Q8N9R0 145 aa14.06□□□□□ -0.16
HOXB3-201ENST00000311626 DYNC1H1Q14204 4646 aaKnown RBP14.05□□□□□ -0.16
HOXB3-201ENST00000311626 A0A1B0GU69 56 aa14.04□□□□□ -0.16
HOXB3-201ENST00000311626 FAT1Q14517 4588 aa14.04□□□□□ -0.16
HOXB3-201ENST00000311626 Q8N1X5 172 aa14.02□□□□□ -0.16
HOXB3-201ENST00000311626 C9orf92A6NGG3 77 aa13.99□□□□□ -0.17
HOXB3-201ENST00000311626 KTN1-AS1Q86SY8 53 aa13.98□□□□□ -0.17
HOXB3-201ENST00000311626 RBM12B-AS1Q9P1G2 102 aa13.97□□□□□ -0.17
HOXB3-201ENST00000311626 APOBP04114 4563 aaKnown RBP13.82□□□□□ -0.2
HOXB3-201ENST00000311626 MIR22HGQ0VDD5 57 aa13.76□□□□□ -0.21
HOXB3-201ENST00000311626 KRTAP10-4P60372 401 aaPredicted RBP13.75□□□□□ -0.21
HOXB3-201ENST00000311626 RPS29P62273 56 aaKnown RBP13.75□□□□□ -0.21
HOXB3-201ENST00000311626 SPATA8Q6RVD6 105 aa13.74□□□□□ -0.21
HOXB3-201ENST00000311626 PKHD1L1Q86WI1 4243 aa13.73□□□□□ -0.21
HOXB3-201ENST00000311626 A0A1B0GVY2 172 aa13.73□□□□□ -0.21
HOXB3-201ENST00000311626 UQCR11O14957 56 aa13.73□□□□□ -0.21
HOXB3-201ENST00000311626 ADM2Q7Z4H4 148 aa13.67□□□□□ -0.22
HOXB3-201ENST00000311626 A8MUU9 505 aa13.66□□□□□ -0.22
HOXB3-201ENST00000311626 PRAC1Q96KF2 57 aa13.66□□□□□ -0.22
HOXB3-201ENST00000311626 C20orf166-AS1Q96NR2 134 aa13.65□□□□□ -0.22
HOXB3-201ENST00000311626 KRTAP3-1Q9BYR8 98 aa13.63□□□□□ -0.23
HOXB3-201ENST00000311626 RYR2Q92736 4967 aa13.57□□□□□ -0.24
HOXB3-201ENST00000311626 KMT2CQ8NEZ4 4911 aaKnown RBP13.56□□□□□ -0.24
HOXB3-201ENST00000311626 LRP1Q07954 4544 aaKnown RBP13.54□□□□□ -0.24
HOXB3-201ENST00000311626 FLG2Q5D862 2391 aaPredicted RBP13.54□□□□□ -0.24
HOXB3-201ENST00000311626 KRTAP21-3Q3LHN1 58 aa13.52□□□□□ -0.25
HOXB3-201ENST00000311626 A0A0A0MQY5 61 aa13.5□□□□□ -0.25
HOXB3-201ENST00000311626 FAT3Q8TDW7 4589 aa13.39□□□□□ -0.27
HOXB3-201ENST00000311626 H0YAA0 97 aa13.38□□□□□ -0.27
HOXB3-201ENST00000311626 TNXBP22105 4242 aa13.34□□□□□ -0.27
HOXB3-201ENST00000311626 DMBT1Q9UGM3 2413 aaPredicted RBP13.33□□□□□ -0.28
HOXB3-201ENST00000311626 HSPG2P98160 4391 aa13.31□□□□□ -0.28
HOXB3-201ENST00000311626 MYCBP2O75592 4640 aa13.29□□□□□ -0.28
HOXB3-201ENST00000311626 A0A1B0GU33 70 aa13.28□□□□□ -0.28
HOXB3-201ENST00000311626 COX6B2Q6YFQ2 88 aa13.27□□□□□ -0.28
HOXB3-201ENST00000311626 H1FX-AS1Q4G0G2 97 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms