RNA–Protein interactions for RNA: ENST00000304743.6

PCNX1-201, Transcript of pecanex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNX1, Length 12,919 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-201ENST00000304743 PCNTO95613 3336 aa4.75□□□□□ -1.65
PCNX1-201ENST00000304743 Q5VV11 94 aa4.75□□□□□ -1.65
PCNX1-201ENST00000304743 KRTAP10-1P60331 282 aa4.74□□□□□ -1.65
PCNX1-201ENST00000304743 PP632Q6XCG6 107 aa4.74□□□□□ -1.65
PCNX1-201ENST00000304743 COL4A2P08572 1712 aa4.72□□□□□ -1.65
PCNX1-201ENST00000304743 LINC00472Q9H8W2 130 aa4.71□□□□□ -1.65
PCNX1-201ENST00000304743 TENM2Q9NT68 2774 aa4.7□□□□□ -1.66
PCNX1-201ENST00000304743 CELSR1Q9NYQ6 3014 aa4.7□□□□□ -1.66
PCNX1-201ENST00000304743 KRTAP10-2P60368 255 aa4.69□□□□□ -1.66
PCNX1-201ENST00000304743 KRTAP25-1Q3LHN0 102 aa4.68□□□□□ -1.66
PCNX1-201ENST00000304743 ZFHX3Q15911 3703 aa4.64□□□□□ -1.67
PCNX1-201ENST00000304743 SPRR1AP35321 89 aa4.64□□□□□ -1.67
PCNX1-201ENST00000304743 KRTAP10-10P60014 251 aa4.63□□□□□ -1.67
PCNX1-201ENST00000304743 KRTAP26-1Q6PEX3 210 aa4.62□□□□□ -1.67
PCNX1-201ENST00000304743 HRNRQ86YZ3 2850 aaPredicted RBP4.62□□□□□ -1.67
PCNX1-201ENST00000304743 RPS29P62273 56 aaKnown RBP4.6□□□□□ -1.67
PCNX1-201ENST00000304743 OTOGQ6ZRI0 2925 aa4.59□□□□□ -1.67
PCNX1-201ENST00000304743 A0A087X002 238 aa4.58□□□□□ -1.68
PCNX1-201ENST00000304743 RANBP2P49792 3224 aaKnown RBP4.57□□□□□ -1.68
PCNX1-201ENST00000304743 A0A096LNT2 108 aa4.57□□□□□ -1.68
PCNX1-201ENST00000304743 A0A1B0GVY2 172 aa4.57□□□□□ -1.68
PCNX1-201ENST00000304743 FBN1P35555 2871 aaKnown RBP4.54□□□□□ -1.68
PCNX1-201ENST00000304743 MEGF8Q7Z7M0 2845 aa4.54□□□□□ -1.68
PCNX1-201ENST00000304743 KRTAP4-16G5E9R7 235 aaPredicted RBP4.54□□□□□ -1.68
PCNX1-201ENST00000304743 A6NN06 94 aa4.52□□□□□ -1.69
PCNX1-201ENST00000304743 KRTAP1-3Q8IUG1 177 aa4.52□□□□□ -1.69
PCNX1-201ENST00000304743 KRTAP1-1Q07627 177 aa4.51□□□□□ -1.69
PCNX1-201ENST00000304743 KRTAP1-5Q9BYS1 174 aa4.49□□□□□ -1.69
PCNX1-201ENST00000304743 WDFY4Q6ZS81 3184 aa4.47□□□□□ -1.69
PCNX1-201ENST00000304743 NOTCH2NLQ7Z3S9 236 aa4.46□□□□□ -1.69
PCNX1-201ENST00000304743 MKI67P46013 3256 aaKnown RBP4.46□□□□□ -1.7
PCNX1-201ENST00000304743 CFAP47Q6ZTR5 3102 aa4.44□□□□□ -1.7
PCNX1-201ENST00000304743 Q6ZRN7 208 aaPredicted RBP4.44□□□□□ -1.7
PCNX1-201ENST00000304743 KRTAP11-1Q8IUC1 163 aa4.43□□□□□ -1.7
PCNX1-201ENST00000304743 NBPF19A0A087WUL8 3843 aa4.39□□□□□ -1.71
PCNX1-201ENST00000304743 FBN3Q75N90 2809 aa4.36□□□□□ -1.71
PCNX1-201ENST00000304743 COL6A3P12111 3177 aa4.35□□□□□ -1.71
PCNX1-201ENST00000304743 KRTAP29-1A8MX34 341 aaPredicted RBP4.33□□□□□ -1.72
PCNX1-201ENST00000304743 AKAP9Q99996 3911 aa4.32□□□□□ -1.72
PCNX1-201ENST00000304743 TPRXLQ17RH7 258 aa4.29□□□□□ -1.72
PCNX1-201ENST00000304743 UTRNP46939 3433 aa4.29□□□□□ -1.72
PCNX1-201ENST00000304743 ALMS1Q8TCU4 4167 aa4.28□□□□□ -1.72
PCNX1-201ENST00000304743 XP32Q5T750 250 aa4.27□□□□□ -1.73
PCNX1-201ENST00000304743 KRTAP13-2Q52LG2 175 aa4.25□□□□□ -1.73
PCNX1-201ENST00000304743 KRTAP12-2P59991 146 aa4.24□□□□□ -1.73
PCNX1-201ENST00000304743 KRTAP21-3Q3LHN1 58 aa4.23□□□□□ -1.73
PCNX1-201ENST00000304743 KRTAP15-1Q3LI76 137 aa4.19□□□□□ -1.74
PCNX1-201ENST00000304743 CELSR3Q9NYQ7 3312 aa4.19□□□□□ -1.74
PCNX1-201ENST00000304743 CRCT1Q9UGL9 99 aa4.17□□□□□ -1.74
PCNX1-201ENST00000304743 UNC80Q8N2C7 3258 aa4.17□□□□□ -1.74
PCNX1-201ENST00000304743 SPTBN5Q9NRC6 3674 aaKnown RBP4.16□□□□□ -1.74
PCNX1-201ENST00000304743 VCANP13611 3396 aa4.14□□□□□ -1.75
PCNX1-201ENST00000304743 H0YAA0 97 aa4.13□□□□□ -1.75
PCNX1-201ENST00000304743 CMYA5Q8N3K9 4069 aa4.09□□□□□ -1.75
PCNX1-201ENST00000304743 XIRP2A4UGR9 3374 aa4.08□□□□□ -1.76
PCNX1-201ENST00000304743 USP34Q70CQ2 3546 aa4.08□□□□□ -1.76
PCNX1-201ENST00000304743 KRTAP10-6P60371 365 aaPredicted RBP4.07□□□□□ -1.76
PCNX1-201ENST00000304743 BSNQ9UPA5 3926 aa4.06□□□□□ -1.76
PCNX1-201ENST00000304743 KRTAP13-1Q8IUC0 172 aa4.05□□□□□ -1.76
PCNX1-201ENST00000304743 EYSQ5T1H1 3165 aa4.05□□□□□ -1.76
PCNX1-201ENST00000304743 SMG1Q96Q15 3661 aaKnown RBP4.04□□□□□ -1.76
PCNX1-201ENST00000304743 MYO15AQ9UKN7 3530 aa4.03□□□□□ -1.76
PCNX1-201ENST00000304743 KRTAP13-4Q3LI77 160 aa4.02□□□□□ -1.77
PCNX1-201ENST00000304743 LOC400499M0QZD8 3231 aa4□□□□□ -1.77
PCNX1-201ENST00000304743 KRTAP13-3Q3SY46 172 aa4□□□□□ -1.77
PCNX1-201ENST00000304743 SPEGQ15772 3267 aa3.99□□□□□ -1.77
PCNX1-201ENST00000304743 DNAH3Q8TD57 4116 aa3.97□□□□□ -1.77
PCNX1-201ENST00000304743 LAMA3Q16787 3333 aa3.97□□□□□ -1.77
PCNX1-201ENST00000304743 DNAH14Q0VDD8 3507 aa3.97□□□□□ -1.77
PCNX1-201ENST00000304743 SZT2Q5T011 3432 aa3.96□□□□□ -1.77
PCNX1-201ENST00000304743 INE1O15225 51 aa3.95□□□□□ -1.78
PCNX1-201ENST00000304743 HECTD4Q9Y4D8 3996 aa3.93□□□□□ -1.78
PCNX1-201ENST00000304743 KRTAP1-4P0C5Y4 121 aa3.93□□□□□ -1.78
PCNX1-201ENST00000304743 KRTAP7-1Q8IUC3 87 aa3.93□□□□□ -1.78
PCNX1-201ENST00000304743 DMDP11532 3685 aa3.93□□□□□ -1.78
PCNX1-201ENST00000304743 VPS13CQ709C8 3753 aa3.91□□□□□ -1.78
PCNX1-201ENST00000304743 LYSTQ99698 3801 aa3.9□□□□□ -1.78
PCNX1-201ENST00000304743 LAMA5O15230 3695 aa3.9□□□□□ -1.79
PCNX1-201ENST00000304743 TRRAPQ9Y4A5 3859 aa3.86□□□□□ -1.79
PCNX1-201ENST00000304743 ZFHX4Q86UP3 3567 aa3.85□□□□□ -1.79
PCNX1-201ENST00000304743 ZNF469Q96JG9 3925 aaPredicted RBP3.84□□□□□ -1.8
PCNX1-201ENST00000304743 KRTAP10-12P60413 245 aa3.83□□□□□ -1.8
PCNX1-201ENST00000304743 DCHS1Q96JQ0 3298 aa3.81□□□□□ -1.8
PCNX1-201ENST00000304743 KRTAP10-5P60370 271 aa3.8□□□□□ -1.8
PCNX1-201ENST00000304743 DNAH7Q8WXX0 4024 aa3.8□□□□□ -1.8
PCNX1-201ENST00000304743 KRTAP10-7P60409 375 aaPredicted RBP3.79□□□□□ -1.8
PCNX1-201ENST00000304743 KRTAP12-1P59990 96 aa3.78□□□□□ -1.8
PCNX1-201ENST00000304743 BRCA2P51587 3418 aa3.77□□□□□ -1.81
PCNX1-201ENST00000304743 WDFY3Q8IZQ1 3526 aa3.75□□□□□ -1.81
PCNX1-201ENST00000304743 ANK2Q01484 3957 aa3.75□□□□□ -1.81
PCNX1-201ENST00000304743 CDH23Q9H251 3354 aa3.74□□□□□ -1.81
PCNX1-201ENST00000304743 LORP23490 312 aaPredicted RBP3.73□□□□□ -1.81
PCNX1-201ENST00000304743 DNAH1Q9P2D7 4330 aa3.72□□□□□ -1.81
PCNX1-201ENST00000304743 DNAH10Q8IVF4 4471 aa3.71□□□□□ -1.82
PCNX1-201ENST00000304743 KRTAP8-1Q8IUC2 63 aa3.69□□□□□ -1.82
PCNX1-201ENST00000304743 VPS13DQ5THJ4 4388 aa3.67□□□□□ -1.82
PCNX1-201ENST00000304743 DNAH2Q9P225 4427 aa3.66□□□□□ -1.82
PCNX1-201ENST00000304743 KRTAP12-3P60328 96 aa3.65□□□□□ -1.83
PCNX1-201ENST00000304743 CSMD3Q7Z407 3707 aa3.63□□□□□ -1.83
PCNX1-201ENST00000304743 SPENQ96T58 3664 aaKnown RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 508.8 ms