RNA–Protein interactions for RNA: ENST00000304338.7

PPP4R4-201, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4R4, Length 3,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-201ENST00000304338 DNAH2Q9P225 4427 aa8.81□□□□□ -1
PPP4R4-201ENST00000304338 SMIM26A0A096LP01 95 aa8.79□□□□□ -1
PPP4R4-201ENST00000304338 CD164Q04900 197 aa8.78□□□□□ -1
PPP4R4-201ENST00000304338 FLG2Q5D862 2391 aaPredicted RBP8.78□□□□□ -1
PPP4R4-201ENST00000304338 DMBT1Q9UGM3 2413 aaPredicted RBP8.77□□□□□ -1
PPP4R4-201ENST00000304338 FAM229BQ4G0N7 80 aa8.77□□□□□ -1.01
PPP4R4-201ENST00000304338 LINC00304Q8N9R0 145 aa8.76□□□□□ -1.01
PPP4R4-201ENST00000304338 C1orf195Q5TG92 126 aa8.75□□□□□ -1.01
PPP4R4-201ENST00000304338 DNAH17Q9UFH2 4485 aa8.73□□□□□ -1.01
PPP4R4-201ENST00000304338 H3BPC8 53 aa8.73□□□□□ -1.01
PPP4R4-201ENST00000304338 IGKV2D-30A0A075B6S6 120 aa8.71□□□□□ -1.02
PPP4R4-201ENST00000304338 IGKV2-30P06310 120 aa8.71□□□□□ -1.02
PPP4R4-201ENST00000304338 C8orf87E5RJ46 101 aa8.7□□□□□ -1.02
PPP4R4-201ENST00000304338 KRTAP1-4P0C5Y4 121 aa8.7□□□□□ -1.02
PPP4R4-201ENST00000304338 FAM229AH3BQW9 127 aa8.7□□□□□ -1.02
PPP4R4-201ENST00000304338 ZCCHC13Q8WW36 166 aaKnown RBP8.7□□□□□ -1.02
PPP4R4-201ENST00000304338 DNAH6Q9C0G6 4158 aa8.7□□□□□ -1.02
PPP4R4-201ENST00000304338 SPINK1P00995 79 aa8.69□□□□□ -1.02
PPP4R4-201ENST00000304338 FRAS1Q86XX4 4008 aa8.69□□□□□ -1.02
PPP4R4-201ENST00000304338 HYDINQ4G0P3 5121 aa8.69□□□□□ -1.02
PPP4R4-201ENST00000304338 HECTD4Q9Y4D8 3996 aa8.68□□□□□ -1.02
PPP4R4-201ENST00000304338 C9orf92A6NGG3 77 aa8.68□□□□□ -1.02
PPP4R4-201ENST00000304338 PSPHP1O15172 72 aa8.66□□□□□ -1.02
PPP4R4-201ENST00000304338 Q5W150 140 aa8.64□□□□□ -1.03
PPP4R4-201ENST00000304338 DNAH8Q96JB1 4490 aa8.64□□□□□ -1.03
PPP4R4-201ENST00000304338 LRP1BQ9NZR2 4599 aa8.63□□□□□ -1.03
PPP4R4-201ENST00000304338 CHKB-CPT1BH3BT56 60 aa8.62□□□□□ -1.03
PPP4R4-201ENST00000304338 LOC101927531A0A1B0GV80 90 aa8.61□□□□□ -1.03
PPP4R4-201ENST00000304338 FP248Q71RG6 208 aaPredicted RBP8.61□□□□□ -1.03
PPP4R4-201ENST00000304338 V9GYY9 64 aa8.61□□□□□ -1.03
PPP4R4-201ENST00000304338 SPAG11AQ6PDA7 123 aa8.6□□□□□ -1.03
PPP4R4-201ENST00000304338 Q8N9P0 234 aaPredicted RBP8.6□□□□□ -1.03
PPP4R4-201ENST00000304338 Q5XG85 94 aa8.6□□□□□ -1.03
PPP4R4-201ENST00000304338 COA5Q86WW8 74 aa8.57□□□□□ -1.04
PPP4R4-201ENST00000304338 DNAH5Q8TE73 4624 aa8.57□□□□□ -1.04
PPP4R4-201ENST00000304338 SEC61GP60059 68 aa8.56□□□□□ -1.04
PPP4R4-201ENST00000304338 A0A1B0GVY2 172 aa8.55□□□□□ -1.04
PPP4R4-201ENST00000304338 SPANXA2-OT1Q8N9U9 137 aa8.55□□□□□ -1.04
PPP4R4-201ENST00000304338 ASB16-AS1Q495Z4 193 aa8.55□□□□□ -1.04
PPP4R4-201ENST00000304338 CYP4F30PQ9H0H9 118 aa8.55□□□□□ -1.04
PPP4R4-201ENST00000304338 IGLV7-46A0A075B6I9 117 aa8.53□□□□□ -1.04
PPP4R4-201ENST00000304338 ALMS1Q8TCU4 4167 aa8.53□□□□□ -1.04
PPP4R4-201ENST00000304338 Q5VSD8 79 aa8.52□□□□□ -1.05
PPP4R4-201ENST00000304338 PRR15LQ9BU68 103 aa8.52□□□□□ -1.05
PPP4R4-201ENST00000304338 A8MUN3 132 aa8.49□□□□□ -1.05
PPP4R4-201ENST00000304338 HRES1P13985 223 aa8.49□□□□□ -1.05
PPP4R4-201ENST00000304338 FAT1Q14517 4588 aa8.48□□□□□ -1.05
PPP4R4-201ENST00000304338 PKHD1P08F94 4074 aa8.48□□□□□ -1.05
PPP4R4-201ENST00000304338 PRO0628Q9UI54 55 aa8.47□□□□□ -1.05
PPP4R4-201ENST00000304338 SPTSSBQ8NFR3 76 aa8.46□□□□□ -1.05
PPP4R4-201ENST00000304338 C7orf65Q6ZTY9 151 aa8.46□□□□□ -1.06
PPP4R4-201ENST00000304338 SACSQ9NZJ4 4579 aa8.46□□□□□ -1.06
PPP4R4-201ENST00000304338 ACYP2P14621 99 aa8.45□□□□□ -1.06
PPP4R4-201ENST00000304338 VPS13BQ7Z7G8 4022 aa8.44□□□□□ -1.06
PPP4R4-201ENST00000304338 DYNC1H1Q14204 4646 aaKnown RBP8.43□□□□□ -1.06
PPP4R4-201ENST00000304338 FAT2Q9NYQ8 4349 aa8.42□□□□□ -1.06
PPP4R4-201ENST00000304338 Q8N1X5 172 aa8.42□□□□□ -1.06
PPP4R4-201ENST00000304338 A6NED7 52 aa8.39□□□□□ -1.07
PPP4R4-201ENST00000304338 KMT2CQ8NEZ4 4911 aaKnown RBP8.36□□□□□ -1.07
PPP4R4-201ENST00000304338 KRTAP16-1A8MUX0 517 aa8.35□□□□□ -1.07
PPP4R4-201ENST00000304338 Q1T7F1 81 aa8.35□□□□□ -1.07
PPP4R4-201ENST00000304338 PKD1P98161 4303 aa8.34□□□□□ -1.07
PPP4R4-201ENST00000304338 RPS29P62273 56 aaKnown RBP8.31□□□□□ -1.08
PPP4R4-201ENST00000304338 ATP11AUNQ6ZP68 121 aa8.3□□□□□ -1.08
PPP4R4-201ENST00000304338 KRTAP13-3Q3SY46 172 aa8.29□□□□□ -1.08
PPP4R4-201ENST00000304338 KRTAP10-4P60372 401 aaPredicted RBP8.29□□□□□ -1.08
PPP4R4-201ENST00000304338 PMAIP1Q13794 54 aa8.29□□□□□ -1.08
PPP4R4-201ENST00000304338 SPINK7P58062 85 aa8.25□□□□□ -1.09
PPP4R4-201ENST00000304338 RYR2Q92736 4967 aa8.24□□□□□ -1.09
PPP4R4-201ENST00000304338 DMAC1Q96GE9 116 aa8.24□□□□□ -1.09
PPP4R4-201ENST00000304338 A0A1B0GU69 56 aa8.23□□□□□ -1.09
PPP4R4-201ENST00000304338 Q5VV11 94 aa8.22□□□□□ -1.09
PPP4R4-201ENST00000304338 APOBP04114 4563 aaKnown RBP8.18□□□□□ -1.1
PPP4R4-201ENST00000304338 LINC01558Q9Y6Z2 57 aa8.15□□□□□ -1.1
PPP4R4-201ENST00000304338 A8MUU9 505 aa8.15□□□□□ -1.11
PPP4R4-201ENST00000304338 KIAA1109Q2LD37 5005 aa8.14□□□□□ -1.11
PPP4R4-201ENST00000304338 C20orf166-AS1Q96NR2 134 aa8.14□□□□□ -1.11
PPP4R4-201ENST00000304338 KRTAP10-8P60410 259 aa8.14□□□□□ -1.11
PPP4R4-201ENST00000304338 A8MU10 97 aa8.13□□□□□ -1.11
PPP4R4-201ENST00000304338 J3QL48 77 aa8.12□□□□□ -1.11
PPP4R4-201ENST00000304338 LRP1Q07954 4544 aaKnown RBP8.11□□□□□ -1.11
PPP4R4-201ENST00000304338 Q75L30 129 aa8.08□□□□□ -1.12
PPP4R4-201ENST00000304338 RYR3Q15413 4870 aa8.08□□□□□ -1.12
PPP4R4-201ENST00000304338 KRTAP17-1Q9BYP8 105 aa8.01□□□□□ -1.13
PPP4R4-201ENST00000304338 MYCBP2O75592 4640 aa8.01□□□□□ -1.13
PPP4R4-201ENST00000304338 XP32Q5T750 250 aa8□□□□□ -1.13
PPP4R4-201ENST00000304338 LCA10Q71F78 164 aa7.99□□□□□ -1.13
PPP4R4-201ENST00000304338 RPL37P61927 97 aaKnown RBP7.98□□□□□ -1.13
PPP4R4-201ENST00000304338 UQCR11O14957 56 aa7.97□□□□□ -1.13
PPP4R4-201ENST00000304338 COX6B2Q6YFQ2 88 aa7.96□□□□□ -1.13
PPP4R4-201ENST00000304338 CDC42SE1Q9NRR8 79 aa7.96□□□□□ -1.13
PPP4R4-201ENST00000304338 KRTAP4-5Q9BYR2 181 aa7.95□□□□□ -1.14
PPP4R4-201ENST00000304338 RYR1P21817 5038 aa7.95□□□□□ -1.14
PPP4R4-201ENST00000304338 MT1HL1P0DM35 61 aa7.94□□□□□ -1.14
PPP4R4-201ENST00000304338 MIR22HGQ0VDD5 57 aa7.94□□□□□ -1.14
PPP4R4-201ENST00000304338 HSPG2P98160 4391 aa7.92□□□□□ -1.14
PPP4R4-201ENST00000304338 RBM12B-AS1Q9P1G2 102 aa7.9□□□□□ -1.15
PPP4R4-201ENST00000304338 KRTAP3-1Q9BYR8 98 aa7.87□□□□□ -1.15
PPP4R4-201ENST00000304338 FAT3Q8TDW7 4589 aa7.86□□□□□ -1.15
PPP4R4-201ENST00000304338 EPPK1P58107 5090 aaKnown RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms