RNA–Protein interactions for RNA: ENST00000304060.9

ZNF440-201, Transcript of zinc finger protein 440, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF440, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-201ENST00000304060 ZNF861PO60384 105 aa3.58□□□□□ -1.84
ZNF440-201ENST00000304060 SPANXA2-OT1Q8N9U9 137 aa3.58□□□□□ -1.84
ZNF440-201ENST00000304060 IGLV9-49A0A0B4J1Y8 123 aa3.58□□□□□ -1.84
ZNF440-201ENST00000304060 C1orf64Q8NEQ6 169 aa3.57□□□□□ -1.84
ZNF440-201ENST00000304060 CDC42SE1Q9NRR8 79 aa3.57□□□□□ -1.84
ZNF440-201ENST00000304060 LYSTQ99698 3801 aa3.56□□□□□ -1.84
ZNF440-201ENST00000304060 HECTD4Q9Y4D8 3996 aa3.56□□□□□ -1.84
ZNF440-201ENST00000304060 FAT2Q9NYQ8 4349 aa3.56□□□□□ -1.84
ZNF440-201ENST00000304060 IGKV4-1P06312 121 aa3.56□□□□□ -1.84
ZNF440-201ENST00000304060 A8MUN3 132 aa3.55□□□□□ -1.84
ZNF440-201ENST00000304060 HSPG2P98160 4391 aa3.55□□□□□ -1.84
ZNF440-201ENST00000304060 BPY2O14599 106 aa3.55□□□□□ -1.84
ZNF440-201ENST00000304060 C6orf48Q9UBA6 75 aa3.55□□□□□ -1.84
ZNF440-201ENST00000304060 C10orf25Q5T742 122 aa3.55□□□□□ -1.84
ZNF440-201ENST00000304060 TLX1NBP0CAT3 122 aa3.55□□□□□ -1.84
ZNF440-201ENST00000304060 Q8N9P0 234 aaPredicted RBP3.54□□□□□ -1.84
ZNF440-201ENST00000304060 KRTAP26-1Q6PEX3 210 aa3.54□□□□□ -1.84
ZNF440-201ENST00000304060 NOTCH2NLQ7Z3S9 236 aa3.54□□□□□ -1.84
ZNF440-201ENST00000304060 CSMD3Q7Z407 3707 aa3.54□□□□□ -1.84
ZNF440-201ENST00000304060 COX6B2Q6YFQ2 88 aa3.53□□□□□ -1.84
ZNF440-201ENST00000304060 DNAH2Q9P225 4427 aa3.53□□□□□ -1.84
ZNF440-201ENST00000304060 SSBP3-AS1Q7Z2R9 100 aa3.53□□□□□ -1.84
ZNF440-201ENST00000304060 M0R2T5 61 aa3.52□□□□□ -1.85
ZNF440-201ENST00000304060 PRLHP81277 87 aa3.52□□□□□ -1.85
ZNF440-201ENST00000304060 TPRXLQ17RH7 258 aa3.52□□□□□ -1.85
ZNF440-201ENST00000304060 A0A1W2PNN7 141 aa3.51□□□□□ -1.85
ZNF440-201ENST00000304060 LINC00575Q6W349 94 aa3.51□□□□□ -1.85
ZNF440-201ENST00000304060 H3BPC8 53 aa3.51□□□□□ -1.85
ZNF440-201ENST00000304060 C6orf99Q4VX62 202 aa3.51□□□□□ -1.85
ZNF440-201ENST00000304060 Q8NBF4 154 aa3.5□□□□□ -1.85
ZNF440-201ENST00000304060 KMT2AQ03164 3969 aa3.5□□□□□ -1.85
ZNF440-201ENST00000304060 KCNQ1DNQ9H478 68 aa3.5□□□□□ -1.85
ZNF440-201ENST00000304060 MOBPQ13875 183 aa3.49□□□□□ -1.85
ZNF440-201ENST00000304060 HCG22E2RYF7 251 aa3.49□□□□□ -1.85
ZNF440-201ENST00000304060 LINC01558Q9Y6Z2 57 aa3.49□□□□□ -1.85
ZNF440-201ENST00000304060 APOBP04114 4563 aaKnown RBP3.49□□□□□ -1.85
ZNF440-201ENST00000304060 Q8N9L7 120 aa3.48□□□□□ -1.85
ZNF440-201ENST00000304060 A8MU10 97 aa3.48□□□□□ -1.85
ZNF440-201ENST00000304060 SPINK1P00995 79 aa3.48□□□□□ -1.85
ZNF440-201ENST00000304060 LINC00313P59037 77 aa3.48□□□□□ -1.85
ZNF440-201ENST00000304060 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.48□□□□□ -1.85
ZNF440-201ENST00000304060 LINC01554Q52M75 96 aa3.47□□□□□ -1.85
ZNF440-201ENST00000304060 PSPHP1O15172 72 aa3.46□□□□□ -1.86
ZNF440-201ENST00000304060 IGLV6-57P01721 117 aa3.46□□□□□ -1.86
ZNF440-201ENST00000304060 LORP23490 312 aaPredicted RBP3.46□□□□□ -1.86
ZNF440-201ENST00000304060 HERC1Q15751 4861 aa3.46□□□□□ -1.86
ZNF440-201ENST00000304060 Q6ZQY7 126 aa3.45□□□□□ -1.86
ZNF440-201ENST00000304060 RETNLBQ9BQ08 111 aa3.45□□□□□ -1.86
ZNF440-201ENST00000304060 MYCBP2O75592 4640 aa3.45□□□□□ -1.86
ZNF440-201ENST00000304060 SPTSSBQ8NFR3 76 aa3.44□□□□□ -1.86
ZNF440-201ENST00000304060 CRCT1Q9UGL9 99 aa3.44□□□□□ -1.86
ZNF440-201ENST00000304060 FAM168BA1KXE4 195 aa3.43□□□□□ -1.86
ZNF440-201ENST00000304060 IGLV5-48A0A075B6I7 105 aa3.43□□□□□ -1.86
ZNF440-201ENST00000304060 Q6ZRX8 168 aa3.43□□□□□ -1.86
ZNF440-201ENST00000304060 PKHD1P08F94 4074 aa3.42□□□□□ -1.86
ZNF440-201ENST00000304060 IGLV5-37A0A075B6J1 123 aa3.42□□□□□ -1.86
ZNF440-201ENST00000304060 KRTAP23-1A1A580 65 aa3.42□□□□□ -1.86
ZNF440-201ENST00000304060 FAT1Q14517 4588 aa3.41□□□□□ -1.86
ZNF440-201ENST00000304060 PKHD1L1Q86WI1 4243 aa3.41□□□□□ -1.86
ZNF440-201ENST00000304060 SPRR4Q96PI1 79 aa3.41□□□□□ -1.86
ZNF440-201ENST00000304060 PKD1P98161 4303 aa3.4□□□□□ -1.86
ZNF440-201ENST00000304060 UBR4Q5T4S7 5183 aa3.4□□□□□ -1.86
ZNF440-201ENST00000304060 MP68P56378 58 aa3.4□□□□□ -1.86
ZNF440-201ENST00000304060 LINC00208Q96KT6 92 aa3.4□□□□□ -1.86
ZNF440-201ENST00000304060 CHKB-CPT1BH3BT56 60 aa3.4□□□□□ -1.87
ZNF440-201ENST00000304060 KRTAP1-4P0C5Y4 121 aa3.4□□□□□ -1.87
ZNF440-201ENST00000304060 VPS13BQ7Z7G8 4022 aa3.4□□□□□ -1.87
ZNF440-201ENST00000304060 IGLV8-61A0A075B6I0 122 aa3.38□□□□□ -1.87
ZNF440-201ENST00000304060 RPS29P62273 56 aaKnown RBP3.38□□□□□ -1.87
ZNF440-201ENST00000304060 DEFB116Q30KQ4 102 aa3.38□□□□□ -1.87
ZNF440-201ENST00000304060 SMIM29Q86T20 159 aa3.38□□□□□ -1.87
ZNF440-201ENST00000304060 FRAS1Q86XX4 4008 aa3.38□□□□□ -1.87
ZNF440-201ENST00000304060 HMCN2Q8NDA2 5059 aa3.37□□□□□ -1.87
ZNF440-201ENST00000304060 DSCR10P59022 87 aa3.37□□□□□ -1.87
ZNF440-201ENST00000304060 CASC2Q6XLA1 102 aa3.36□□□□□ -1.87
ZNF440-201ENST00000304060 Q8NDZ9 215 aa3.36□□□□□ -1.87
ZNF440-201ENST00000304060 PRR15LQ9BU68 103 aa3.36□□□□□ -1.87
ZNF440-201ENST00000304060 A0A087WSZ3 146 aa3.35□□□□□ -1.87
ZNF440-201ENST00000304060 WFDC13Q8IUB5 93 aa3.35□□□□□ -1.87
ZNF440-201ENST00000304060 ST20-AS1Q8NBB2 130 aa3.35□□□□□ -1.87
ZNF440-201ENST00000304060 A0A1W2PNM2 257 aa3.35□□□□□ -1.87
ZNF440-201ENST00000304060 SPATA8Q6RVD6 105 aa3.34□□□□□ -1.87
ZNF440-201ENST00000304060 ANAPC11Q9NYG5 84 aa3.34□□□□□ -1.88
ZNF440-201ENST00000304060 A6NED7 52 aa3.33□□□□□ -1.88
ZNF440-201ENST00000304060 RNF213Q63HN8 5207 aa3.33□□□□□ -1.88
ZNF440-201ENST00000304060 IGHV6-1A0A0B4J1U7 121 aa3.33□□□□□ -1.88
ZNF440-201ENST00000304060 COA5Q86WW8 74 aa3.33□□□□□ -1.88
ZNF440-201ENST00000304060 Q96NJ1 140 aa3.33□□□□□ -1.88
ZNF440-201ENST00000304060 C9orf92A6NGG3 77 aa3.31□□□□□ -1.88
ZNF440-201ENST00000304060 KRTAP13-3Q3SY46 172 aa3.31□□□□□ -1.88
ZNF440-201ENST00000304060 DNAH8Q96JB1 4490 aa3.31□□□□□ -1.88
ZNF440-201ENST00000304060 SPINK7P58062 85 aa3.3□□□□□ -1.88
ZNF440-201ENST00000304060 A0A0G2JQZ4 141 aa3.3□□□□□ -1.88
ZNF440-201ENST00000304060 KRTAP13-2Q52LG2 175 aa3.3□□□□□ -1.88
ZNF440-201ENST00000304060 PCOTHQ58A44 107 aa3.3□□□□□ -1.88
ZNF440-201ENST00000304060 ADM2Q7Z4H4 148 aa3.3□□□□□ -1.88
ZNF440-201ENST00000304060 XP32Q5T750 250 aa3.29□□□□□ -1.88
ZNF440-201ENST00000304060 H0Y9P7 68 aa3.28□□□□□ -1.88
ZNF440-201ENST00000304060 KRTAP4-16G5E9R7 235 aaPredicted RBP3.27□□□□□ -1.89
ZNF440-201ENST00000304060 K7EQZ3 153 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms