RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 H3BPC8 53 aa8.07□□□□□ -1.12
CTTN-201ENST00000301843 IGLV7-46A0A075B6I9 117 aa8.07□□□□□ -1.12
CTTN-201ENST00000301843 A0A1B0GVX0 72 aa8.07□□□□□ -1.12
CTTN-201ENST00000301843 A0A087WTM6 91 aa8.06□□□□□ -1.12
CTTN-201ENST00000301843 RTL8CO15255 209 aa8.06□□□□□ -1.12
CTTN-201ENST00000301843 CIRBP-AS1Q8TBR5 109 aa8.06□□□□□ -1.12
CTTN-201ENST00000301843 LCA10Q71F78 164 aa8.05□□□□□ -1.12
CTTN-201ENST00000301843 Q5W150 140 aa8.04□□□□□ -1.12
CTTN-201ENST00000301843 LIMD2Q9BT23 127 aa8.03□□□□□ -1.12
CTTN-201ENST00000301843 MRPL34Q9BQ48 92 aaKnown RBP8.02□□□□□ -1.12
CTTN-201ENST00000301843 IGLV5-52A0A0A0MRZ9 124 aa8.02□□□□□ -1.13
CTTN-201ENST00000301843 HRES1P13985 223 aa8.02□□□□□ -1.13
CTTN-201ENST00000301843 PRR26Q8N8Z3 221 aa8.02□□□□□ -1.13
CTTN-201ENST00000301843 DNAH11Q96DT5 4516 aa8□□□□□ -1.13
CTTN-201ENST00000301843 SEC61GP60059 68 aa8□□□□□ -1.13
CTTN-201ENST00000301843 ASB16-AS1Q495Z4 193 aa8□□□□□ -1.13
CTTN-201ENST00000301843 LINC00483Q53H64 154 aa7.99□□□□□ -1.13
CTTN-201ENST00000301843 TP53AIP1Q9HCN2 124 aa7.99□□□□□ -1.13
CTTN-201ENST00000301843 ZNF861PO60384 105 aa7.98□□□□□ -1.13
CTTN-201ENST00000301843 Q6ZR54 194 aa7.98□□□□□ -1.13
CTTN-201ENST00000301843 SPINK7P58062 85 aa7.97□□□□□ -1.13
CTTN-201ENST00000301843 ALMS1Q8TCU4 4167 aa7.96□□□□□ -1.13
CTTN-201ENST00000301843 ZNF706Q9Y5V0 76 aaPredicted RBP7.95□□□□□ -1.14
CTTN-201ENST00000301843 LOC101927531A0A1B0GV80 90 aa7.94□□□□□ -1.14
CTTN-201ENST00000301843 Q75L30 129 aa7.94□□□□□ -1.14
CTTN-201ENST00000301843 PLAC8Q9NZF1 115 aa7.91□□□□□ -1.14
CTTN-201ENST00000301843 DNHD1Q96M86 4753 aa7.91□□□□□ -1.14
CTTN-201ENST00000301843 LRP1BQ9NZR2 4599 aa7.9□□□□□ -1.15
CTTN-201ENST00000301843 DNAH5Q8TE73 4624 aa7.89□□□□□ -1.15
CTTN-201ENST00000301843 LY6G6CO95867 125 aa7.89□□□□□ -1.15
CTTN-201ENST00000301843 IGLV7-43P04211 117 aa7.89□□□□□ -1.15
CTTN-201ENST00000301843 LINC01558Q9Y6Z2 57 aa7.88□□□□□ -1.15
CTTN-201ENST00000301843 KRTAP10-2P60368 255 aa7.86□□□□□ -1.15
CTTN-201ENST00000301843 C1orf134Q5TEV5 83 aa7.84□□□□□ -1.15
CTTN-201ENST00000301843 CDC42SE1Q9NRR8 79 aa7.84□□□□□ -1.15
CTTN-201ENST00000301843 KRTAP13-3Q3SY46 172 aa7.83□□□□□ -1.16
CTTN-201ENST00000301843 ATP11AUNQ6ZP68 121 aa7.83□□□□□ -1.16
CTTN-201ENST00000301843 HYDINQ4G0P3 5121 aa7.81□□□□□ -1.16
CTTN-201ENST00000301843 LINC00313P59037 77 aa7.8□□□□□ -1.16
CTTN-201ENST00000301843 A6NN06 94 aa7.8□□□□□ -1.16
CTTN-201ENST00000301843 KTN1-AS1Q86SY8 53 aa7.8□□□□□ -1.16
CTTN-201ENST00000301843 IGKV2D-30A0A075B6S6 120 aa7.79□□□□□ -1.16
CTTN-201ENST00000301843 IGKV2-30P06310 120 aa7.79□□□□□ -1.16
CTTN-201ENST00000301843 KRTAP13-2Q52LG2 175 aa7.79□□□□□ -1.16
CTTN-201ENST00000301843 FAT2Q9NYQ8 4349 aa7.78□□□□□ -1.16
CTTN-201ENST00000301843 VPS13BQ7Z7G8 4022 aa7.78□□□□□ -1.16
CTTN-201ENST00000301843 ACYP2P14621 99 aa7.76□□□□□ -1.17
CTTN-201ENST00000301843 RBM12B-AS1Q9P1G2 102 aa7.76□□□□□ -1.17
CTTN-201ENST00000301843 PRAC1Q96KF2 57 aa7.72□□□□□ -1.17
CTTN-201ENST00000301843 KRTAP10-1P60331 282 aa7.71□□□□□ -1.17
CTTN-201ENST00000301843 SPINK1P00995 79 aa7.71□□□□□ -1.18
CTTN-201ENST00000301843 SSBP3-AS1Q7Z2R9 100 aa7.71□□□□□ -1.18
CTTN-201ENST00000301843 ADM2Q7Z4H4 148 aa7.71□□□□□ -1.18
CTTN-201ENST00000301843 DMAC1Q96GE9 116 aa7.69□□□□□ -1.18
CTTN-201ENST00000301843 PKD1P98161 4303 aa7.69□□□□□ -1.18
CTTN-201ENST00000301843 A0A1B0GU69 56 aa7.69□□□□□ -1.18
CTTN-201ENST00000301843 FAM229AH3BQW9 127 aa7.69□□□□□ -1.18
CTTN-201ENST00000301843 C8orf87E5RJ46 101 aa7.68□□□□□ -1.18
CTTN-201ENST00000301843 PKHD1P08F94 4074 aa7.68□□□□□ -1.18
CTTN-201ENST00000301843 C7orf65Q6ZTY9 151 aa7.65□□□□□ -1.18
CTTN-201ENST00000301843 Q8N1X5 172 aa7.65□□□□□ -1.18
CTTN-201ENST00000301843 KRTAP16-1A8MUX0 517 aa7.64□□□□□ -1.19
CTTN-201ENST00000301843 Q6ZSA8 131 aa7.63□□□□□ -1.19
CTTN-201ENST00000301843 PLA2G1BP04054 148 aaKnown RBP7.62□□□□□ -1.19
CTTN-201ENST00000301843 C4orf48Q5BLP8 95 aa7.62□□□□□ -1.19
CTTN-201ENST00000301843 KRTAP1-4P0C5Y4 121 aa7.61□□□□□ -1.19
CTTN-201ENST00000301843 TYMSOSQ8TAI1 123 aa7.57□□□□□ -1.2
CTTN-201ENST00000301843 FAT1Q14517 4588 aa7.56□□□□□ -1.2
CTTN-201ENST00000301843 SMR3BP02814 79 aaPredicted RBP7.55□□□□□ -1.2
CTTN-201ENST00000301843 MIR22HGQ0VDD5 57 aa7.54□□□□□ -1.2
CTTN-201ENST00000301843 C9orf92A6NGG3 77 aa7.54□□□□□ -1.2
CTTN-201ENST00000301843 UQCR11O14957 56 aa7.5□□□□□ -1.21
CTTN-201ENST00000301843 FLG2Q5D862 2391 aaPredicted RBP7.49□□□□□ -1.21
CTTN-201ENST00000301843 SPATA8Q6RVD6 105 aa7.48□□□□□ -1.21
CTTN-201ENST00000301843 LINC00304Q8N9R0 145 aa7.42□□□□□ -1.22
CTTN-201ENST00000301843 DYNC1H1Q14204 4646 aaKnown RBP7.42□□□□□ -1.22
CTTN-201ENST00000301843 CSAG1Q6PB30 78 aa7.38□□□□□ -1.23
CTTN-201ENST00000301843 SACSQ9NZJ4 4579 aa7.38□□□□□ -1.23
CTTN-201ENST00000301843 DMBT1Q9UGM3 2413 aaPredicted RBP7.37□□□□□ -1.23
CTTN-201ENST00000301843 KRTAP21-3Q3LHN1 58 aa7.35□□□□□ -1.23
CTTN-201ENST00000301843 KRTAP3-1Q9BYR8 98 aa7.33□□□□□ -1.24
CTTN-201ENST00000301843 H0YAA0 97 aa7.32□□□□□ -1.24
CTTN-201ENST00000301843 MYCBP2O75592 4640 aa7.31□□□□□ -1.24
CTTN-201ENST00000301843 RPS29P62273 56 aaKnown RBP7.31□□□□□ -1.24
CTTN-201ENST00000301843 LRP1Q07954 4544 aaKnown RBP7.3□□□□□ -1.24
CTTN-201ENST00000301843 LINC01554Q52M75 96 aa7.29□□□□□ -1.24
CTTN-201ENST00000301843 CRIPTQ9P021 101 aa7.28□□□□□ -1.24
CTTN-201ENST00000301843 H3BS24 57 aa7.28□□□□□ -1.24
CTTN-201ENST00000301843 APOBP04114 4563 aaKnown RBP7.26□□□□□ -1.25
CTTN-201ENST00000301843 A0A1B0GVY2 172 aa7.24□□□□□ -1.25
CTTN-201ENST00000301843 A0A1B0GU33 70 aa7.22□□□□□ -1.25
CTTN-201ENST00000301843 KRTAP10-4P60372 401 aaPredicted RBP7.22□□□□□ -1.25
CTTN-201ENST00000301843 PKHD1L1Q86WI1 4243 aa7.21□□□□□ -1.26
CTTN-201ENST00000301843 HSPG2P98160 4391 aa7.2□□□□□ -1.26
CTTN-201ENST00000301843 A8MUU9 505 aa7.2□□□□□ -1.26
CTTN-201ENST00000301843 C20orf166-AS1Q96NR2 134 aa7.19□□□□□ -1.26
CTTN-201ENST00000301843 KMT2CQ8NEZ4 4911 aaKnown RBP7.19□□□□□ -1.26
CTTN-201ENST00000301843 H1FX-AS1Q4G0G2 97 aa7.16□□□□□ -1.26
CTTN-201ENST00000301843 FAT3Q8TDW7 4589 aa7.1□□□□□ -1.27
CTTN-201ENST00000301843 A0A0D9SG42 100 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms