RNA–Protein interactions for RNA: ENST00000301764.11

DDB1-201, Transcript of damage specific DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDB1, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-201ENST00000301764 A6NN06 94 aa9.17□□□□□ -0.94
DDB1-201ENST00000301764 LINC00304Q8N9R0 145 aa9.14□□□□□ -0.95
DDB1-201ENST00000301764 A0A087X002 238 aa9.14□□□□□ -0.95
DDB1-201ENST00000301764 NOTCH2NLQ7Z3S9 236 aa9.14□□□□□ -0.95
DDB1-201ENST00000301764 KRTAP11-1Q8IUC1 163 aa9.14□□□□□ -0.95
DDB1-201ENST00000301764 PANO1I0J062 215 aa9.13□□□□□ -0.95
DDB1-201ENST00000301764 KMT2BQ9UMN6 2715 aaPredicted RBP9.13□□□□□ -0.95
DDB1-201ENST00000301764 A0A0D9SG42 100 aa9.11□□□□□ -0.95
DDB1-201ENST00000301764 A0A1B0GU33 70 aa9.11□□□□□ -0.95
DDB1-201ENST00000301764 FLG2Q5D862 2391 aaPredicted RBP9.11□□□□□ -0.95
DDB1-201ENST00000301764 DMAC1Q96GE9 116 aa9.09□□□□□ -0.95
DDB1-201ENST00000301764 CRIPTQ9P021 101 aa9.07□□□□□ -0.96
DDB1-201ENST00000301764 PLAC8Q9NZF1 115 aa9.05□□□□□ -0.96
DDB1-201ENST00000301764 ADM2Q7Z4H4 148 aa9.05□□□□□ -0.96
DDB1-201ENST00000301764 SMR3BP02814 79 aaPredicted RBP9.03□□□□□ -0.96
DDB1-201ENST00000301764 SPENQ96T58 3664 aaKnown RBP9.02□□□□□ -0.97
DDB1-201ENST00000301764 LINC00483Q53H64 154 aa9□□□□□ -0.97
DDB1-201ENST00000301764 TENM3Q9P273 2699 aa8.97□□□□□ -0.97
DDB1-201ENST00000301764 SPATA8Q6RVD6 105 aa8.96□□□□□ -0.97
DDB1-201ENST00000301764 PDZD2O15018 2839 aa8.89□□□□□ -0.99
DDB1-201ENST00000301764 ASB16-AS1Q495Z4 193 aa8.89□□□□□ -0.99
DDB1-201ENST00000301764 VWFP04275 2813 aa8.85□□□□□ -0.99
DDB1-201ENST00000301764 KRTAP13-1Q8IUC0 172 aa8.84□□□□□ -0.99
DDB1-201ENST00000301764 TENM1Q9UKZ4 2725 aa8.81□□□□□ -1
DDB1-201ENST00000301764 TENM4Q6N022 2769 aa8.79□□□□□ -1
DDB1-201ENST00000301764 H1FX-AS1Q4G0G2 97 aa8.76□□□□□ -1.01
DDB1-201ENST00000301764 KRTAP10-2P60368 255 aa8.75□□□□□ -1.01
DDB1-201ENST00000301764 Q6ZRN7 208 aaPredicted RBP8.74□□□□□ -1.01
DDB1-201ENST00000301764 J3QL48 77 aa8.72□□□□□ -1.01
DDB1-201ENST00000301764 FBN1P35555 2871 aaKnown RBP8.71□□□□□ -1.02
DDB1-201ENST00000301764 RPL37P61927 97 aaKnown RBP8.71□□□□□ -1.02
DDB1-201ENST00000301764 KRTAP10-1P60331 282 aa8.7□□□□□ -1.02
DDB1-201ENST00000301764 PKD1L1Q8TDX9 2849 aa8.69□□□□□ -1.02
DDB1-201ENST00000301764 ROMO1P60602 79 aa8.69□□□□□ -1.02
DDB1-201ENST00000301764 KRTAP25-1Q3LHN0 102 aa8.68□□□□□ -1.02
DDB1-201ENST00000301764 TGP01266 2768 aa8.66□□□□□ -1.02
DDB1-201ENST00000301764 KRTAP13-2Q52LG2 175 aa8.62□□□□□ -1.03
DDB1-201ENST00000301764 S4R3F8 94 aa8.57□□□□□ -1.04
DDB1-201ENST00000301764 COX6B2Q6YFQ2 88 aa8.56□□□□□ -1.04
DDB1-201ENST00000301764 LUZP6Q538Z0 58 aa8.54□□□□□ -1.04
DDB1-201ENST00000301764 CSMD2Q7Z408 3487 aa8.53□□□□□ -1.04
DDB1-201ENST00000301764 SRRM2Q9UQ35 2752 aaKnown RBP8.52□□□□□ -1.05
DDB1-201ENST00000301764 TENM2Q9NT68 2774 aa8.51□□□□□ -1.05
DDB1-201ENST00000301764 OTOGQ6ZRI0 2925 aa8.48□□□□□ -1.05
DDB1-201ENST00000301764 Q6ZSA8 131 aa8.48□□□□□ -1.05
DDB1-201ENST00000301764 A8MUU9 505 aa8.45□□□□□ -1.06
DDB1-201ENST00000301764 CAMK2N1Q7Z7J9 78 aa8.41□□□□□ -1.06
DDB1-201ENST00000301764 NDUFAF8A1L188 74 aa8.41□□□□□ -1.06
DDB1-201ENST00000301764 BSNQ9UPA5 3926 aa8.4□□□□□ -1.07
DDB1-201ENST00000301764 H0YAA0 97 aa8.38□□□□□ -1.07
DDB1-201ENST00000301764 R4GN34 69 aa8.38□□□□□ -1.07
DDB1-201ENST00000301764 NBPF19A0A087WUL8 3843 aa8.38□□□□□ -1.07
DDB1-201ENST00000301764 KRTAP13-3Q3SY46 172 aa8.34□□□□□ -1.07
DDB1-201ENST00000301764 M0QZ58 72 aa8.3□□□□□ -1.08
DDB1-201ENST00000301764 KRTAP16-1A8MUX0 517 aa8.29□□□□□ -1.08
DDB1-201ENST00000301764 RPS29P62273 56 aaKnown RBP8.28□□□□□ -1.08
DDB1-201ENST00000301764 ZFHX3Q15911 3703 aa8.28□□□□□ -1.08
DDB1-201ENST00000301764 FBN3Q75N90 2809 aa8.27□□□□□ -1.09
DDB1-201ENST00000301764 A0A0A0MQY5 61 aa8.26□□□□□ -1.09
DDB1-201ENST00000301764 KRTAP1-4P0C5Y4 121 aa8.25□□□□□ -1.09
DDB1-201ENST00000301764 C10orf95Q9H7T3 257 aa8.24□□□□□ -1.09
DDB1-201ENST00000301764 TRRAPQ9Y4A5 3859 aa8.23□□□□□ -1.09
DDB1-201ENST00000301764 C20orf166-AS1Q96NR2 134 aa8.21□□□□□ -1.09
DDB1-201ENST00000301764 VPS13CQ709C8 3753 aa8.19□□□□□ -1.1
DDB1-201ENST00000301764 Q5VSD8 79 aa8.15□□□□□ -1.1
DDB1-201ENST00000301764 MEGF8Q7Z7M0 2845 aa8.08□□□□□ -1.12
DDB1-201ENST00000301764 COL7A1Q02388 2944 aa8.07□□□□□ -1.12
DDB1-201ENST00000301764 M0R2T5 61 aa8.07□□□□□ -1.12
DDB1-201ENST00000301764 ANK3Q12955 4377 aaKnown RBP7.97□□□□□ -1.13
DDB1-201ENST00000301764 SEC61BP60468 96 aaKnown RBP7.97□□□□□ -1.13
DDB1-201ENST00000301764 P0C880 135 aa7.96□□□□□ -1.14
DDB1-201ENST00000301764 KRTAP21-3Q3LHN1 58 aa7.88□□□□□ -1.15
DDB1-201ENST00000301764 CSMD3Q7Z407 3707 aa7.87□□□□□ -1.15
DDB1-201ENST00000301764 PLAC4Q8WY50 150 aa7.85□□□□□ -1.15
DDB1-201ENST00000301764 KRTAP3-1Q9BYR8 98 aa7.85□□□□□ -1.15
DDB1-201ENST00000301764 XP32Q5T750 250 aa7.85□□□□□ -1.15
DDB1-201ENST00000301764 TPRXLQ17RH7 258 aa7.8□□□□□ -1.16
DDB1-201ENST00000301764 ZNF469Q96JG9 3925 aaPredicted RBP7.8□□□□□ -1.16
DDB1-201ENST00000301764 KRTAP10-8P60410 259 aa7.75□□□□□ -1.17
DDB1-201ENST00000301764 KRTAP12-2P59991 146 aa7.74□□□□□ -1.17
DDB1-201ENST00000301764 AKAP9Q99996 3911 aa7.67□□□□□ -1.18
DDB1-201ENST00000301764 KRTAP13-4Q3LI77 160 aa7.67□□□□□ -1.18
DDB1-201ENST00000301764 TNP1P09430 55 aa7.64□□□□□ -1.19
DDB1-201ENST00000301764 KRTAP10-6P60371 365 aaPredicted RBP7.62□□□□□ -1.19
DDB1-201ENST00000301764 KRTAP12-1P59990 96 aa7.61□□□□□ -1.19
DDB1-201ENST00000301764 PP632Q6XCG6 107 aa7.61□□□□□ -1.19
DDB1-201ENST00000301764 HUWE1Q7Z6Z7 4374 aaKnown RBP7.45□□□□□ -1.22
DDB1-201ENST00000301764 A0A1B0GVY2 172 aa7.4□□□□□ -1.22
DDB1-201ENST00000301764 KRTAP15-1Q3LI76 137 aa7.4□□□□□ -1.22
DDB1-201ENST00000301764 KRTAP3-2Q9BYR7 98 aa7.4□□□□□ -1.22
DDB1-201ENST00000301764 KRTAP3-3Q9BYR6 98 aa7.37□□□□□ -1.23
DDB1-201ENST00000301764 DNAH10Q8IVF4 4471 aa7.31□□□□□ -1.24
DDB1-201ENST00000301764 PLECQ15149 4684 aaKnown RBP7.13□□□□□ -1.27
DDB1-201ENST00000301764 DNAH11Q96DT5 4516 aa7.11□□□□□ -1.27
DDB1-201ENST00000301764 DNAH1Q9P2D7 4330 aa7.09□□□□□ -1.27
DDB1-201ENST00000301764 DNAH9Q9NYC9 4486 aa7.08□□□□□ -1.28
DDB1-201ENST00000301764 KRTAP10-4P60372 401 aaPredicted RBP7.06□□□□□ -1.28
DDB1-201ENST00000301764 KRTAP10-10P60014 251 aa7.02□□□□□ -1.29
DDB1-201ENST00000301764 DNAH8Q96JB1 4490 aa6.97□□□□□ -1.29
DDB1-201ENST00000301764 DNAH5Q8TE73 4624 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 247.6 ms