RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 MMP24-AS1A0A0U1RRL7 71 aa8.11□□□□□ -1.11
CTDP1-202ENST00000299543 KRTAP13-1Q8IUC0 172 aa8.11□□□□□ -1.11
CTDP1-202ENST00000299543 IGLV7-46A0A075B6I9 117 aa8.1□□□□□ -1.11
CTDP1-202ENST00000299543 LINC01554Q52M75 96 aa8.1□□□□□ -1.11
CTDP1-202ENST00000299543 FLG2Q5D862 2391 aaPredicted RBP8.1□□□□□ -1.11
CTDP1-202ENST00000299543 H3BPC8 53 aa8.08□□□□□ -1.12
CTDP1-202ENST00000299543 LINC01558Q9Y6Z2 57 aa8.08□□□□□ -1.12
CTDP1-202ENST00000299543 STARD9Q9P2P6 4700 aa8.08□□□□□ -1.12
CTDP1-202ENST00000299543 MEGF8Q7Z7M0 2845 aa8.07□□□□□ -1.12
CTDP1-202ENST00000299543 IGLV5-52A0A0A0MRZ9 124 aa8.07□□□□□ -1.12
CTDP1-202ENST00000299543 HRES1P13985 223 aa8.07□□□□□ -1.12
CTDP1-202ENST00000299543 CIRBP-AS1Q8TBR5 109 aa8.06□□□□□ -1.12
CTDP1-202ENST00000299543 FBN3Q75N90 2809 aa8.06□□□□□ -1.12
CTDP1-202ENST00000299543 LY6G6CO95867 125 aa8.05□□□□□ -1.12
CTDP1-202ENST00000299543 C8orf17Q9NRJ1 99 aa8.05□□□□□ -1.12
CTDP1-202ENST00000299543 KMT2AQ03164 3969 aa8.04□□□□□ -1.12
CTDP1-202ENST00000299543 FRAS1Q86XX4 4008 aa8.04□□□□□ -1.12
CTDP1-202ENST00000299543 ZNF706Q9Y5V0 76 aaPredicted RBP8.04□□□□□ -1.12
CTDP1-202ENST00000299543 WWC2-AS2Q96NR7 200 aa8.04□□□□□ -1.12
CTDP1-202ENST00000299543 RETNLBQ9BQ08 111 aa8.04□□□□□ -1.12
CTDP1-202ENST00000299543 A0A087X002 238 aa8.04□□□□□ -1.12
CTDP1-202ENST00000299543 NOTCH2NLQ7Z3S9 236 aa8.04□□□□□ -1.12
CTDP1-202ENST00000299543 Q96NJ1 140 aa8.04□□□□□ -1.12
CTDP1-202ENST00000299543 ZNF861PO60384 105 aa8.03□□□□□ -1.12
CTDP1-202ENST00000299543 PRKDCP78527 4128 aaKnown RBP8.02□□□□□ -1.13
CTDP1-202ENST00000299543 PLAC8Q9NZF1 115 aa8.02□□□□□ -1.13
CTDP1-202ENST00000299543 C1orf134Q5TEV5 83 aa8.01□□□□□ -1.13
CTDP1-202ENST00000299543 A0A1B0GVX0 72 aa8□□□□□ -1.13
CTDP1-202ENST00000299543 CSAG1Q6PB30 78 aa7.99□□□□□ -1.13
CTDP1-202ENST00000299543 A0A1B0GU69 56 aa7.98□□□□□ -1.13
CTDP1-202ENST00000299543 LINC00483Q53H64 154 aa7.97□□□□□ -1.13
CTDP1-202ENST00000299543 MRPL34Q9BQ48 92 aaKnown RBP7.96□□□□□ -1.13
CTDP1-202ENST00000299543 TP53AIP1Q9HCN2 124 aa7.96□□□□□ -1.14
CTDP1-202ENST00000299543 DYNC2H1Q8NCM8 4307 aaKnown RBP7.95□□□□□ -1.14
CTDP1-202ENST00000299543 VPS13DQ5THJ4 4388 aa7.95□□□□□ -1.14
CTDP1-202ENST00000299543 HECTD4Q9Y4D8 3996 aa7.95□□□□□ -1.14
CTDP1-202ENST00000299543 IGLV7-43P04211 117 aa7.94□□□□□ -1.14
CTDP1-202ENST00000299543 Q6ZR54 194 aa7.94□□□□□ -1.14
CTDP1-202ENST00000299543 DNAH8Q96JB1 4490 aa7.94□□□□□ -1.14
CTDP1-202ENST00000299543 DMBT1Q9UGM3 2413 aaPredicted RBP7.92□□□□□ -1.14
CTDP1-202ENST00000299543 DNAH2Q9P225 4427 aa7.92□□□□□ -1.14
CTDP1-202ENST00000299543 DNAH17Q9UFH2 4485 aa7.9□□□□□ -1.15
CTDP1-202ENST00000299543 KRTAP10-2P60368 255 aa7.89□□□□□ -1.15
CTDP1-202ENST00000299543 MIR22HGQ0VDD5 57 aa7.88□□□□□ -1.15
CTDP1-202ENST00000299543 SPINK1P00995 79 aa7.88□□□□□ -1.15
CTDP1-202ENST00000299543 Q5W150 140 aa7.87□□□□□ -1.15
CTDP1-202ENST00000299543 ACYP2P14621 99 aa7.87□□□□□ -1.15
CTDP1-202ENST00000299543 ASB16-AS1Q495Z4 193 aa7.87□□□□□ -1.15
CTDP1-202ENST00000299543 DNHD1Q96M86 4753 aa7.86□□□□□ -1.15
CTDP1-202ENST00000299543 PLA2G1BP04054 148 aaKnown RBP7.85□□□□□ -1.15
CTDP1-202ENST00000299543 ALMS1Q8TCU4 4167 aa7.84□□□□□ -1.15
CTDP1-202ENST00000299543 DNAH6Q9C0G6 4158 aa7.84□□□□□ -1.15
CTDP1-202ENST00000299543 DNAH11Q96DT5 4516 aa7.84□□□□□ -1.15
CTDP1-202ENST00000299543 UQCR11O14957 56 aa7.82□□□□□ -1.16
CTDP1-202ENST00000299543 CRIPTQ9P021 101 aa7.79□□□□□ -1.16
CTDP1-202ENST00000299543 SSBP3-AS1Q7Z2R9 100 aa7.79□□□□□ -1.16
CTDP1-202ENST00000299543 KRTAP10-1P60331 282 aa7.77□□□□□ -1.17
CTDP1-202ENST00000299543 KRTAP13-2Q52LG2 175 aa7.74□□□□□ -1.17
CTDP1-202ENST00000299543 IGKV2D-30A0A075B6S6 120 aa7.74□□□□□ -1.17
CTDP1-202ENST00000299543 IGKV2-30P06310 120 aa7.74□□□□□ -1.17
CTDP1-202ENST00000299543 LRP1BQ9NZR2 4599 aa7.72□□□□□ -1.17
CTDP1-202ENST00000299543 DNAH5Q8TE73 4624 aa7.7□□□□□ -1.18
CTDP1-202ENST00000299543 SPATA8Q6RVD6 105 aa7.7□□□□□ -1.18
CTDP1-202ENST00000299543 FAM229AH3BQW9 127 aa7.67□□□□□ -1.18
CTDP1-202ENST00000299543 KRTAP13-3Q3SY46 172 aa7.66□□□□□ -1.18
CTDP1-202ENST00000299543 TYMSOSQ8TAI1 123 aa7.65□□□□□ -1.18
CTDP1-202ENST00000299543 SMR3BP02814 79 aaPredicted RBP7.62□□□□□ -1.19
CTDP1-202ENST00000299543 HYDINQ4G0P3 5121 aa7.62□□□□□ -1.19
CTDP1-202ENST00000299543 KRTAP1-4P0C5Y4 121 aa7.6□□□□□ -1.19
CTDP1-202ENST00000299543 VPS13BQ7Z7G8 4022 aa7.6□□□□□ -1.19
CTDP1-202ENST00000299543 Q6ZSA8 131 aa7.59□□□□□ -1.19
CTDP1-202ENST00000299543 DMAC1Q96GE9 116 aa7.59□□□□□ -1.19
CTDP1-202ENST00000299543 Q8N1X5 172 aa7.57□□□□□ -1.2
CTDP1-202ENST00000299543 ROMO1P60602 79 aa7.56□□□□□ -1.2
CTDP1-202ENST00000299543 KRTAP16-1A8MUX0 517 aa7.54□□□□□ -1.2
CTDP1-202ENST00000299543 C9orf92A6NGG3 77 aa7.51□□□□□ -1.21
CTDP1-202ENST00000299543 LINC00304Q8N9R0 145 aa7.5□□□□□ -1.21
CTDP1-202ENST00000299543 PKD1P98161 4303 aa7.5□□□□□ -1.21
CTDP1-202ENST00000299543 PKHD1P08F94 4074 aa7.49□□□□□ -1.21
CTDP1-202ENST00000299543 FAT2Q9NYQ8 4349 aa7.49□□□□□ -1.21
CTDP1-202ENST00000299543 KRTAP25-1Q3LHN0 102 aa7.48□□□□□ -1.21
CTDP1-202ENST00000299543 SPINT4Q6UDR6 99 aa7.48□□□□□ -1.21
CTDP1-202ENST00000299543 P0C880 135 aa7.45□□□□□ -1.22
CTDP1-202ENST00000299543 FAT1Q14517 4588 aa7.43□□□□□ -1.22
CTDP1-202ENST00000299543 A8MUU9 505 aa7.43□□□□□ -1.22
CTDP1-202ENST00000299543 H0YAA0 97 aa7.39□□□□□ -1.23
CTDP1-202ENST00000299543 K7ERS5 55 aa7.39□□□□□ -1.23
CTDP1-202ENST00000299543 A0A1B0GU33 70 aa7.35□□□□□ -1.23
CTDP1-202ENST00000299543 DYNC1H1Q14204 4646 aaKnown RBP7.34□□□□□ -1.24
CTDP1-202ENST00000299543 NDUFAF8A1L188 74 aa7.31□□□□□ -1.24
CTDP1-202ENST00000299543 SACSQ9NZJ4 4579 aa7.31□□□□□ -1.24
CTDP1-202ENST00000299543 A0A0D9SG42 100 aa7.29□□□□□ -1.24
CTDP1-202ENST00000299543 RPS29P62273 56 aaKnown RBP7.22□□□□□ -1.25
CTDP1-202ENST00000299543 C10orf95Q9H7T3 257 aa7.2□□□□□ -1.26
CTDP1-202ENST00000299543 C20orf166-AS1Q96NR2 134 aa7.19□□□□□ -1.26
CTDP1-202ENST00000299543 H1FX-AS1Q4G0G2 97 aa7.18□□□□□ -1.26
CTDP1-202ENST00000299543 KRTAP3-1Q9BYR8 98 aa7.17□□□□□ -1.26
CTDP1-202ENST00000299543 A0A1B0GVY2 172 aa7.16□□□□□ -1.26
CTDP1-202ENST00000299543 APOBP04114 4563 aaKnown RBP7.15□□□□□ -1.26
CTDP1-202ENST00000299543 LRP1Q07954 4544 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms