RNA–Protein interactions for RNA: ENST00000296930.9

NPM1-201, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-201ENST00000296930 Q6ZVQ6 151 aa9.13□□□□□ -0.95
NPM1-201ENST00000296930 UBL5Q9BZL1 73 aa9.12□□□□□ -0.95
NPM1-201ENST00000296930 SEC61BP60468 96 aaKnown RBP9.1□□□□□ -0.95
NPM1-201ENST00000296930 NREPQ16612 68 aa9.09□□□□□ -0.95
NPM1-201ENST00000296930 SS18L2Q9UHA2 77 aa9.09□□□□□ -0.95
NPM1-201ENST00000296930 Q5XG85 94 aa9.07□□□□□ -0.96
NPM1-201ENST00000296930 KRTAP9-2Q9BYQ4 174 aa9.06□□□□□ -0.96
NPM1-201ENST00000296930 LINC00643Q86TS7 51 aa9.05□□□□□ -0.96
NPM1-201ENST00000296930 Q96NJ1 140 aa9.05□□□□□ -0.96
NPM1-201ENST00000296930 LIMD2Q9BT23 127 aa9.05□□□□□ -0.96
NPM1-201ENST00000296930 LINC00472Q9H8W2 130 aa9.05□□□□□ -0.96
NPM1-201ENST00000296930 XP32Q5T750 250 aa9.04□□□□□ -0.96
NPM1-201ENST00000296930 DEFB116Q30KQ4 102 aa9.02□□□□□ -0.97
NPM1-201ENST00000296930 KRTAP4-1Q9BYQ7 146 aa9.01□□□□□ -0.97
NPM1-201ENST00000296930 IGKV3D-7A0A0C4DH55 119 aa8.99□□□□□ -0.97
NPM1-201ENST00000296930 BPY2O14599 106 aa8.99□□□□□ -0.97
NPM1-201ENST00000296930 C1orf195Q5TG92 126 aa8.99□□□□□ -0.97
NPM1-201ENST00000296930 ATP5EP2Q5VTU8 51 aa8.99□□□□□ -0.97
NPM1-201ENST00000296930 SIGMAR1Q99720 223 aa8.99□□□□□ -0.97
NPM1-201ENST00000296930 MT-ATP8P03928 68 aa8.98□□□□□ -0.97
NPM1-201ENST00000296930 CXCL6P80162 114 aa8.98□□□□□ -0.97
NPM1-201ENST00000296930 DSCR10P59022 87 aa8.96□□□□□ -0.97
NPM1-201ENST00000296930 IGKV4-1P06312 121 aa8.96□□□□□ -0.98
NPM1-201ENST00000296930 J3KT08 172 aa8.94□□□□□ -0.98
NPM1-201ENST00000296930 Q8N9L7 120 aa8.93□□□□□ -0.98
NPM1-201ENST00000296930 K7EQZ3 153 aa8.91□□□□□ -0.98
NPM1-201ENST00000296930 A8MWP4 228 aa8.91□□□□□ -0.98
NPM1-201ENST00000296930 C9orf92A6NGG3 77 aa8.9□□□□□ -0.98
NPM1-201ENST00000296930 HIST1H4AP62805 103 aaKnown RBP8.87□□□□□ -0.99
NPM1-201ENST00000296930 PRR15Q8IV56 129 aa8.87□□□□□ -0.99
NPM1-201ENST00000296930 PCOTHQ58A44 107 aa8.86□□□□□ -0.99
NPM1-201ENST00000296930 IMUPQ9GZP8 106 aa8.86□□□□□ -0.99
NPM1-201ENST00000296930 A0A087WVE0 104 aa8.85□□□□□ -0.99
NPM1-201ENST00000296930 A0A1B0GVX0 72 aa8.85□□□□□ -0.99
NPM1-201ENST00000296930 NDUFB1O75438 58 aa8.85□□□□□ -0.99
NPM1-201ENST00000296930 IGHV6-1A0A0B4J1U7 121 aa8.82□□□□□ -1
NPM1-201ENST00000296930 NOTCH2NLQ7Z3S9 236 aa8.8□□□□□ -1
NPM1-201ENST00000296930 KRTAP9-6A0A140TA67 174 aa8.79□□□□□ -1
NPM1-201ENST00000296930 MMP24-AS1A0A0U1RRL7 71 aa8.78□□□□□ -1
NPM1-201ENST00000296930 C8orf17Q9NRJ1 99 aa8.78□□□□□ -1
NPM1-201ENST00000296930 KRTAP19-2Q3LHN2 52 aa8.78□□□□□ -1
NPM1-201ENST00000296930 HCG22E2RYF7 251 aa8.76□□□□□ -1.01
NPM1-201ENST00000296930 C8orf87E5RJ46 101 aa8.75□□□□□ -1.01
NPM1-201ENST00000296930 RPL37P61927 97 aaKnown RBP8.75□□□□□ -1.01
NPM1-201ENST00000296930 WFDC13Q8IUB5 93 aa8.74□□□□□ -1.01
NPM1-201ENST00000296930 LINC00313P59037 77 aa8.73□□□□□ -1.01
NPM1-201ENST00000296930 FAM236AA0A1B0GUQ0 79 aa8.73□□□□□ -1.01
NPM1-201ENST00000296930 FAM236BA0A1B0GV22 79 aa8.73□□□□□ -1.01
NPM1-201ENST00000296930 CASC2Q6XLA1 102 aa8.72□□□□□ -1.01
NPM1-201ENST00000296930 hDV103S1A0JD37 113 aa8.71□□□□□ -1.01
NPM1-201ENST00000296930 MT1HP80294 61 aa8.71□□□□□ -1.01
NPM1-201ENST00000296930 KRTAP16-1A8MUX0 517 aa8.7□□□□□ -1.02
NPM1-201ENST00000296930 TMEM254Q8TBM7 123 aa8.68□□□□□ -1.02
NPM1-201ENST00000296930 MRPL34Q9BQ48 92 aaKnown RBP8.66□□□□□ -1.02
NPM1-201ENST00000296930 KRTAP4-8Q9BYQ9 185 aa8.66□□□□□ -1.02
NPM1-201ENST00000296930 SCGB1A1P11684 91 aa8.64□□□□□ -1.03
NPM1-201ENST00000296930 Q8N9P0 234 aaPredicted RBP8.62□□□□□ -1.03
NPM1-201ENST00000296930 COX6B2Q6YFQ2 88 aa8.61□□□□□ -1.03
NPM1-201ENST00000296930 ATOX1O00244 68 aa8.6□□□□□ -1.03
NPM1-201ENST00000296930 Q75L30 129 aa8.58□□□□□ -1.04
NPM1-201ENST00000296930 OCR1Q9BZK8 76 aa8.58□□□□□ -1.04
NPM1-201ENST00000296930 ATP11AUNQ6ZP68 121 aa8.58□□□□□ -1.04
NPM1-201ENST00000296930 C20orf166-AS1Q96NR2 134 aa8.58□□□□□ -1.04
NPM1-201ENST00000296930 M0R2T5 61 aa8.57□□□□□ -1.04
NPM1-201ENST00000296930 NDUFS5O43920 106 aa8.57□□□□□ -1.04
NPM1-201ENST00000296930 KRTAP10-6P60371 365 aaPredicted RBP8.57□□□□□ -1.04
NPM1-201ENST00000296930 A8MUU9 505 aa8.56□□□□□ -1.04
NPM1-201ENST00000296930 CRCT1Q9UGL9 99 aa8.55□□□□□ -1.04
NPM1-201ENST00000296930 FSIP2Q5CZC0 6907 aa8.54□□□□□ -1.04
NPM1-201ENST00000296930 SMIM20Q8N5G0 67 aa8.52□□□□□ -1.05
NPM1-201ENST00000296930 TP53AIP1Q9HCN2 124 aa8.52□□□□□ -1.05
NPM1-201ENST00000296930 TRAV7A0A075B6U4 112 aa8.51□□□□□ -1.05
NPM1-201ENST00000296930 FLGP20930 4061 aaPredicted RBP8.5□□□□□ -1.05
NPM1-201ENST00000296930 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.49□□□□□ -1.05
NPM1-201ENST00000296930 UQCRQO14949 82 aa8.49□□□□□ -1.05
NPM1-201ENST00000296930 SERP2Q8N6R1 65 aa8.49□□□□□ -1.05
NPM1-201ENST00000296930 ANAPC13Q9BS18 74 aa8.49□□□□□ -1.05
NPM1-201ENST00000296930 Q5W150 140 aa8.48□□□□□ -1.05
NPM1-201ENST00000296930 TRAV22A0A0B4J277 110 aa8.45□□□□□ -1.06
NPM1-201ENST00000296930 ZCCHC13Q8WW36 166 aaKnown RBP8.45□□□□□ -1.06
NPM1-201ENST00000296930 COX7CP15954 63 aa8.42□□□□□ -1.06
NPM1-201ENST00000296930 C5orf47Q569G3 176 aa8.42□□□□□ -1.06
NPM1-201ENST00000296930 H0Y9P7 68 aa8.41□□□□□ -1.06
NPM1-201ENST00000296930 MP68P56378 58 aa8.37□□□□□ -1.07
NPM1-201ENST00000296930 C20orf197Q8N268 126 aa8.35□□□□□ -1.07
NPM1-201ENST00000296930 LINC00208Q96KT6 92 aa8.35□□□□□ -1.07
NPM1-201ENST00000296930 H3BPC8 53 aa8.33□□□□□ -1.08
NPM1-201ENST00000296930 CCDC179H3BU77 68 aa8.33□□□□□ -1.08
NPM1-201ENST00000296930 PCP4P48539 62 aa8.33□□□□□ -1.08
NPM1-201ENST00000296930 C1orf64Q8NEQ6 169 aa8.33□□□□□ -1.08
NPM1-201ENST00000296930 SNURFQ9Y675 71 aa8.31□□□□□ -1.08
NPM1-201ENST00000296930 IGKV2-30P06310 120 aa8.3□□□□□ -1.08
NPM1-201ENST00000296930 LOC101927531A0A1B0GV80 90 aa8.3□□□□□ -1.08
NPM1-201ENST00000296930 KLKP1Q107X0 134 aa8.3□□□□□ -1.08
NPM1-201ENST00000296930 KRTAP4-12Q9BQ66 201 aa8.3□□□□□ -1.08
NPM1-201ENST00000296930 IGKV2D-30A0A075B6S6 120 aa8.28□□□□□ -1.08
NPM1-201ENST00000296930 CYP4F30PQ9H0H9 118 aa8.27□□□□□ -1.09
NPM1-201ENST00000296930 LCE3BQ5TA77 95 aa8.26□□□□□ -1.09
NPM1-201ENST00000296930 C7orf65Q6ZTY9 151 aa8.26□□□□□ -1.09
NPM1-201ENST00000296930 CYSTM1Q9H1C7 97 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms